BAC Information

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BAC

Clone NameB6Ng01-068M10
Chromosome3 (Build37)
Map Location 76,144,025 - 76,145,110
singlet/doubletsinglet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068M10.bB6Ng01-068M10.g
ACCDH887266DH887267
length1,3051,072
definitionDH887266|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M10, 5' end.DH887267|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattccaaaacaccatcagatctttctacaaaaggctatactcaacaa
actggagaacctggatgaaatggacaagtttctagacagataccaggtac
caaagttaaatcaggatctggttatgatctaaacagtcctatattcccta
aagaaatagaagcagtcattaatagtctcccagccaaaacaagcccagga
caagatgggtttagtgtagaccttcaaagaacatctaatcccagttcttc
acaaaatagaagcagaaggtactctacccaactcattctatgaagccaca
attactctgatatctaaaccacagaaagacccaaaaagatagagaacttc
agacaaatttcccttatgaatatcgacgaaaaatcctcaataaaattctc
ggtaaccaaatccaagaacacatcaaaacaatcatccatcctgaccaagt
aggtttcattccagggatgcagggatggttcaatatacggaaatccatca
atgtaatccactatataaacaaactcaaagacaaaaaccacatgatcctc
tcattagatgcggaaaaagcatttgaaaaaatccaacaaccattcatgat
aaaagtcttggaaagatcaggaattcaaggcccatacctaaacatgataa
aagcaatctacagcaaaccagtagccaacatcaaaataaatggtgagact
ctggaagcaatcccactaaaatcagggactagacaaggctgcccactttc
tccctacctatacaacattgcagttgaagtcctagccagagcaatttcga
caacaaaaggagatcaagggtaaaaaaattggaaaggaagaagtcaaaat
atcactttttgcagatgatatgatagtatatataagtgaccctaaaaatt
ccactagagaattttgaaaaccctgataaacagcttcagtgaagtaactg
gaaataaaattaacttcaaacaagtaaattgcctttctgtacacaatgga
taacaggctgagaagaaataggaacacacccttctcaatagtttacaaat
aattataaatttgtggtgtgactcctactagaaaggtgaaagatctggta
tgataagacttcagtcttctgaagaaggattagaagaatctcgagatgga
agatctcccttgctcttggttagcagattactcttggttaattgcttcat
gcccagagccatctcaatccatcaattccatttaagtcactcctatttct
ttggcacgattaataagcagctctctggctacagcttatcttcctgtgcg
tatca
gaattcttttggaaaattgttttaatattggcttctcagaaataaagatg
tggctttaccaactattctgggacaaaataaaaacctttactaactagaa
tagaagaaatacatataaataaatctgttgatgatttcaaagacagaaaa
attttaaggagtaactgttgatggcacaaggagcacactgccattttcat
ttgctcttcctttttttttttaattattttattttatttcttttacttat
ttagtttacatgttgctagcttgctacctcctggccagccccttccacaa
tccttagctcctcatcccttcccctttcctcctctgaatgaatgggggct
gtctatgtatccaccctccctggcacatcaaggctctaaagagctagata
catcctctcccactgagactagacaaggcaacccagctagaacatatcct
atgtacaggcaacaagtattgggatagccccctttccagttgtttgtgac
ccacatgaagaccaagctgcatatcttctacatatgcatggggaggccta
gcttcaattagtatatgctatttgattggtggttcagactcaaagagtct
caaaggcccaggttagttgattctgttgttcttgtggagttcctatcccc
tttgggaccggaatccttcctcctatacttccataaaagtccccaagctc
catccgctatttggctgtgggtgtctgtatctgagtttgctcactttaat
aggtcttgtcagttcattaggaattactcttttaacagggaccacagtaa
ctatacagtgtccagagacagttattaagttaccagataagagaaactgc
tcacttttcatgttgaatactttagtcattatcattctattgttctattg
atcataattggcttaatttagtgtgcattgatgaccacctttatgaccac
aagccaaaactatacagaataataccaaagtattaagcttagggtaatat
tagtatggaatacagaactaaaattgagctctccttaattaggttcttgt
atgcaaatgacataatttttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76144025_76145110
seq2: B6Ng01-068M10.g_70_1141

seq1  GAATTCTTTTGGAAAATTGTTTTAATATTGGCTTCTCAGAAATAAAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGAAAATTGTTTTAATATTGGCTTCTCAGAAATAAAGATG  50

seq1  TGGCTTTACCAACTATTCTGGGACAAAATAAAAACCTTTACTAACTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTACCAACTATTCTGGGACAAAATAAAAACCTTTACTAACTAGAA  100

seq1  TAGAAGAAATACATATAAATAAATCTGTTGATGATTTCAAAGACAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAATACATATAAATAAATCTGTTGATGATTTCAAAGACAGAAAA  150

seq1  ATTTTAAGGAGTAACTGTTGATGGCACAAGGAGCACACTGCCATTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGGAGTAACTGTTGATGGCACAAGGAGCACACTGCCATTTTCAT  200

seq1  TTGCTCTTCCTTTTTTTTTTTAATTATTTTATTTTATTTCTTTTACTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTCCTTTTTTTTTTTAATTATTTTATTTTATTTCTTTTACTTAT  250

seq1  TTAGTTTACATGTTGCTAGCTTGCTACCTCCTGGCCAGCCCCTTCCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTACATGTTGCTAGCTTGCTACCTCCTGGCCAGCCCCTTCCACAA  300

seq1  TCCTTAGCTCCTCATCCCTTCCCCTTTCCTCCTCTGAATGAATGGGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGCTCCTCATCCCTTCCCCTTTCCTCCTCTGAATGAATGGGGGCT  350

seq1  GTCTATGTATCCACCCTCCCTGGCACATCAAGGCTCTAAAGAGCTAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTATCCACCCTCCCTGGCACATCAAGGCTCTAAAGAGCTAGATA  400

seq1  CATCCTCTCCCACTGAGACTAGACAAGGCAACCCAGCTAGAACATATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTCCCACTGAGACTAGACAAGGCAACCCAGCTAGAACATATCCT  450

seq1  ATGTACAGGCAACAAGTATTGGGATAGCCCCCTTTCCAGTTGTTTGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGGCAACAAGTATTGGGATAGCCCCCTTTCCAGTTGTTTGTGAC  500

seq1  CCACATGAAGACCAAGCTGCATATCTTCTACATATGCATGGGGAGGCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGAAGACCAAGCTGCATATCTTCTACATATGCATGGGGAGGCCTA  550

seq1  GCTTCAATTAGTATATGCTATTTGATTGGTGGTTCAGACTCAAAGAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAATTAGTATATGCTATTTGATTGGTGGTTCAGACTCAAAGAGTCT  600

seq1  CAAAGGCCCAGGTTAGTTGATTCTGTTGTTCTTGTGGAGTTCCTATCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCCAGGTTAGTTGATTCTGTTGTTCTTGTGGAGTTCCTATCCCC  650

seq1  TTTGGGACCGGAATCCTTCCTCCTATACTTCCATAAAAGTCCCCAAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACCGGAATCCTTCCTCCTATACTTCCATAAAAGTCCCCAAGCTC  700

seq1  CATCCGCTATTTGGCTGTGGGTGTCTGTATCTGAGTTTGCTCACTTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGCTATTTGGCTGTGGGTGTCTGTATCTGAGTTTGCTCACTTTAAT  750

seq1  AGGTCTTGTCAGTTCATTAGGAATTACTCTTTTAACAGGGACCACAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGTCAGTTCATTAGGAATTACTCTTTTAACAGGGACCACAGTAA  800

seq1  CTATACAGTGTCCAGAGACAGTTATTAAGTTACCAGATAAGAGAAACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGTGTCCAGAGACAGTTATTAAGTTACCAGATAAGAGAAACTGC  850

seq1  TCACTTTTTCATGTTGAAATACTTTAGTCATTATCATTCTATTGTTCTAT  900
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCAC-TTTTCATGTTG-AATACTTTAGTCATTATCATTCTATTGTTCTAT  898

seq1  TGATCATAATTGGCTTAATTTTAGTGTGCATTGATGA-CACCATTATGAC  949
      |||||||||||||||||| |||||||||||||||||| |||| |||||||
seq2  TGATCATAATTGGCTTAA-TTTAGTGTGCATTGATGACCACCTTTATGAC  947

seq1  CACAAGCCAAAAACTATACAAGAATAATACCAAAGTATTAAGCTTAGGGT  999
      |||||||| |||||||||| ||||||||||||||||||||||||||||| 
seq2  CACAAGCC-AAAACTATAC-AGAATAATACCAAAGTATTAAGCTTAGGG-  994

seq1  TAATATTAGTATGGAATACAGAACTTAAAATTTGAGCTTCTCTTTAATTA  1049
      |||||||||||||||||||||||||  ||| |||||| |||| |||||||
seq2  TAATATTAGTATGGAATACAGAACT--AAAATTGAGC-TCTCCTTAATTA  1041

seq1  GGGTTCTTGTTATGCAAATGGTACATAAATGTTTTAT  1086
       |||||||| ||||||||||  ||||||   ||||||
seq2  -GGTTCTTG-TATGCAAATG--ACATAA--TTTTTAT  1072