BAC Information

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BAC

Clone NameB6Ng01-068O09
Chromosome3 (Build37)
Map Location 117,785,532 - 117,915,576
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC674908, D3Bwg0562e, 4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneDpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068O09.bB6Ng01-068O09.g
ACCDH887357DH887358
length553934
definitionDH887357|Mus musculus domesticus DNA, BAC clone: B6Ng01-068O09, 5' end.DH887358|Mus musculus domesticus DNA, BAC clone: B6Ng01-068O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,915,034 - 117,915,576)(117,785,532 - 117,786,471)
sequence
aaacaaatatttgtgcaatgtttactgtaacatcattctcaattaccaaa
gaatgggaaaatctcaaatgttcataaacagatgaaaagacaacagatat
gttgttaatactggaatatttcaacaaattttaataaaggaaggaaattc
tagcaaatatgacactgttgctagtatcttgaagacttgctaaatgagat
taaaacataaaagaaaaataatgtatgattccattaatatgaaataaact
gggcattccaatttgtacagatagtcaacagattcctggttggaaagaga
gagagagagagagtagagagagagagagagagcgcaaagaatgggctttt
atcatgtcttgggtgtagattttagctaagatataaaatcctattagaag
taactttcggggatgggtgtgctaacatgtagatattctttatgacacta
agctatacatctaaaatgggttaaaccattaaattttattctgtgtattt
tatcacaacaaagatataaattccataatacaaaatgtctctaatttgct
gtc
gaattcagttcgaaatctgttgtggtttggttgtgaaagctgcttgaatc
ctttaattattggtctccagttggtggtgcttttgcggaaagctatagtg
ggatgtggagcctagctggaggaagtgggtcactgggggcaggccttgag
gctttaaatcctgtccctggttcctgttcgctttctgctccctgaatcga
aactcagtgtaaccagtggatctcttgtttccttgcattccctgtggtga
aggaatgatcctctccaactgtaaaccagcgtcaatgctctctgccttga
gtggcttctggtcaggtatgtaatccgttcagacagaaaagaaagcatca
cagaagcaaatcaagaactgatttagtttaatcagctcaaagtcaaactc
tatggtggtcttggaataaaaaggcctgttctgtggactgcccagttgag
gaactcagtggacagaatacaacctgagctctgtacctcttcaaattgac
tcactgctatttcaaacaaaaaagattagatttagaatgaatgttgaacc
cagagacatgggattaggattagaacatgtctagccaaattttgaatttg
cattttttaaaaataggaaattattggtataagtgtgtactgcatcactt
gcagcgggcacacacatattttaaaaaaattgtgcattggatacacgatc
cttttaaatggaagtggatttcctaggcttttatttgttatatttggcaa
tctgagagtcttctactattttgtagctcttctattgaatgggtagaaca
acagactttcatgaatttacccatggtgattatttagaaatggtaactaa
tttatcattatgatttctaaagaccaacattattttactctctacagggc
agataataataacttttatggactccatgaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117915034_117915576
seq2: B6Ng01-068O09.b_61_603 (reverse)

seq1  GACAGCAAATTAGAGACATTTTGTATTATGGAATTTATATCTTTGTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAATTAGAGACATTTTGTATTATGGAATTTATATCTTTGTTGTG  50

seq1  ATAAAATACACAGAATAAAATTTAATGGTTTAACCCATTTTAGATGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATACACAGAATAAAATTTAATGGTTTAACCCATTTTAGATGTATA  100

seq1  GCTTAGTGTCATAAAGAATATCTACATGTTAGCACACCCATCCCCGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTGTCATAAAGAATATCTACATGTTAGCACACCCATCCCCGAAAG  150

seq1  TTACTTCTAATAGGATTTTATATCTTAGCTAAAATCTACACCCAAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCTAATAGGATTTTATATCTTAGCTAAAATCTACACCCAAGACAT  200

seq1  GATAAAAGCCCATTCTTTGCGCTCTCTCTCTCTCTCTCTACTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGCCCATTCTTTGCGCTCTCTCTCTCTCTCTCTACTCTCTCTCT  250

seq1  CTCTCTCTTTCCAACCAGGAATCTGTTGACTATCTGTACAAATTGGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTCCAACCAGGAATCTGTTGACTATCTGTACAAATTGGAATG  300

seq1  CCCAGTTTATTTCATATTAATGGAATCATACATTATTTTTCTTTTATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTATTTCATATTAATGGAATCATACATTATTTTTCTTTTATGTT  350

seq1  TTAATCTCATTTAGCAAGTCTTCAAGATACTAGCAACAGTGTCATATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCATTTAGCAAGTCTTCAAGATACTAGCAACAGTGTCATATTTG  400

seq1  CTAGAATTTCCTTCCTTTATTAAAATTTGTTGAAATATTCCAGTATTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTTCCTTCCTTTATTAAAATTTGTTGAAATATTCCAGTATTAAC  450

seq1  AACATATCTGTTGTCTTTTCATCTGTTTATGAACATTTGAGATTTTCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCTGTTGTCTTTTCATCTGTTTATGAACATTTGAGATTTTCCCA  500

seq1  TTCTTTGGTAATTGAGAATGATGTTACAGTAAACATTGCACAA  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGTAATTGAGAATGATGTTACAGTAAACATTGCACAA  543

seq1: chr3_117785532_117786471
seq2: B6Ng01-068O09.g_70_1003

seq1  GAATTCAGTTCGAAATCTGTTGTGGTTTGGTTGTGAAAGCTGCTTGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCGAAATCTGTTGTGGTTTGGTTGTGAAAGCTGCTTGAATC  50

seq1  CTTTAATTATTGGTCTCCAGTTGGTGGTGCTTTTGCGGAAAGCTATAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTATTGGTCTCCAGTTGGTGGTGCTTTTGCGGAAAGCTATAGTG  100

seq1  GGATGTGGAGCCTAGCTGGAGGAAGTGGGTCACTGGGGGCAGGCCTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGAGCCTAGCTGGAGGAAGTGGGTCACTGGGGGCAGGCCTTGAG  150

seq1  GCTTTAAATCCTGTCCCTGGTTCCTGTTCGCTTTCTGCTCCCTGAATCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAATCCTGTCCCTGGTTCCTGTTCGCTTTCTGCTCCCTGAATCGA  200

seq1  AACTCAGTGTAACCAGTGGATCTCTTGTTTCCTTGCATTCCCTGTGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTGTAACCAGTGGATCTCTTGTTTCCTTGCATTCCCTGTGGTGA  250

seq1  AGGAATGATCCTCTCCAACTGTAAACCAGCGTCAATGCTCTCTGCCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGATCCTCTCCAACTGTAAACCAGCGTCAATGCTCTCTGCCTTGA  300

seq1  GTGGCTTCTGGTCAGGTATGTAATCCGTTCAGACAGAAAAGAAAGCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCTGGTCAGGTATGTAATCCGTTCAGACAGAAAAGAAAGCATCA  350

seq1  CAGAAGCAAATCAAGAACTGATTTAGTTTAATCAGCTCAAAGTCAAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAAATCAAGAACTGATTTAGTTTAATCAGCTCAAAGTCAAACTC  400

seq1  TATGGTGGTCTTGGAATAAAAAGGCCTGTTCTGTGGACTGCCCAGTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGGTCTTGGAATAAAAAGGCCTGTTCTGTGGACTGCCCAGTTGAG  450

seq1  GAACTCAGTGGACAGAATACAACCTGAGCTCTGTACCTCTTCAAATTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGTGGACAGAATACAACCTGAGCTCTGTACCTCTTCAAATTGAC  500

seq1  TCACTGCTATTTCAAACAAAAAAGATTAGATTTAGAATGAATGTTGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCTATTTCAAACAAAAAAGATTAGATTTAGAATGAATGTTGAACC  550

seq1  CAGAGACATGGGATTAGGATTAGAACATGTCTAGCCAAATTTTGAATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACATGGGATTAGGATTAGAACATGTCTAGCCAAATTTTGAATTTG  600

seq1  CATTTTTTAAAAATAGGAAATTATTGGTATAAGTGTGTACTGCATCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTAAAAATAGGAAATTATTGGTATAAGTGTGTACTGCATCACTT  650

seq1  GCAGCGGGCACACACATATTTTAAAAAAATTGTGCATTGGATACACGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGGGCACACACATATTTTAAAAAAATTGTGCATTGGATACACGATC  700

seq1  CTTTTAAATGGAAGTGGATTTCCTAGGCTTTTATTTGTTATATTTGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAATGGAAGTGGATTTCCTAGGCTTTTATTTGTTATATTTGGCAA  750

seq1  TCTGAGAGTCTTCTACTAATTTTGTAGCTCTTCTATTGAATGGGTAGAAC  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCTGAGAGTCTTCTACT-ATTTTGTAGCTCTTCTATTGAATGGGTAGAAC  799

seq1  AACAGGACTTTCATGAATTTACCCATGGTGAATAATTAGTAAATGGTAAC  850
      |||| |||||||||||||||||||||||||| || |||| ||||||||||
seq2  AACA-GACTTTCATGAATTTACCCATGGTGATTATTTAG-AAATGGTAAC  847

seq1  TAATTTTATCATTATGATTTTCTAAAGACCAACAATATTTTACTCCCTAC  900
      ||| ||||||||||||| |||||||||||||||| |||||||||| ||||
seq2  TAA-TTTATCATTATGA-TTTCTAAAGACCAACATTATTTTACTCTCTAC  895

seq1  AGGGCAAGATAATAATAAACTTTATGGACCCCATGAACTT  940
      ||||| ||||||||||||  ||||||||| ||||||||||
seq2  AGGGC-AGATAATAATAACTTTTATGGACTCCATGAACTT  934