BAC Information

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BAC

Clone NameB6Ng01-069G04
Chromosome3 (Build37)
Map Location 79,677,288 - 79,678,407
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144
Downstream gene1110032E23Rik, EG626797, Gria2, Glrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069G04.bB6Ng01-069G04.g
ACCDH887711DH887712
length1,1141,156
definitionDH887711|Mus musculus domesticus DNA, BAC clone: B6Ng01-069G04, 5' end.DH887712|Mus musculus domesticus DNA, BAC clone: B6Ng01-069G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttgggaatcagtcaagaagtaatatcacttgatcgtatgca
gagttgtaaccttccaggtgaagatgatgcaataggacgcggccaatggg
ttctccttgctgctcatcacctgtgcagactcttctaattccaacaaagg
tggacaagttcatgagccccccctgagcacaccagggaacacactgaaca
gttacaataattgcatcaggatgccatattttaggtttagagataataaa
acagcttttggggggattatattatagacatgacacactatgctgcttaa
acgttaacataagtgaggagcagcttgatcactcatgcattcagagtgtg
ctgaacatccccaggctttacaatttacagttgtaaacagagcaaggcca
ccctaagtattcctcatgcctctccatgtgggacaagctacaggcaagac
tcacaaacagctttttatgatagagtttaggagaatgccctattctttga
attttgatgggcatactacaaggaaccttcttcacattgtttttttttta
atcttatgtacagtacacaactgactttctaaaatgtctaatgttctgat
gacaactcatcttaaaaattgcaggactccactggctcacagtgtgattg
gcagtcatcctgtctcttccactgtacaatccaaacaaactttgggcaaa
tatgaagagggacaccattttcaaacttcatgctccataattattttcta
gaactagggagatgtcagccagatatctttgatatgatacactgaggtgc
ctttgtggagatgaccactgacagtcagtcacagctctgccctgttcagg
gaagcaaatggttacttgctcaggcagtgtcttagagtttttattgctgc
tgtgacacacaccatgaccatggcatcttgtataaaggaaaacatttaat
tggggctgcttacagtttcagaggcttggtccattgtcttcatggtggga
agcatggtgttatgcaggcagaaatgttgctagaaaggtagctgagagtt
ctacatctgaatggcaggcagtggagacgttgagcacttgtctgcttcgc
ttccgaaactgcaa
gaattctcacctgaggaataccgaatggcagaggagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatttgaa
aggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
atgagagctagagaagtagccacgagctaagggatctgcaacctatagtg
gacacattatgagctacagtacccgagctctgactctagctgcatatatc
aaagatgctagtcgcatcactgaaagaagcccatggactgccactaaatg
gccagtacagggaatacaggccaaaaatggggattgtttgcacgggaatg
ggtgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79677288_79678407
seq2: B6Ng01-069G04.b_47_1160

seq1  GAATTCCATTTGGGAATCAGTCAAGAAGTAATATCACTTGATCGTATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTGGGAATCAGTCAAGAAGTAATATCACTTGATCGTATGCA  50

seq1  GAGTTGTAACCTTCCAGGTGAAGATGATGCAATAGGACGCGGCCAATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTAACCTTCCAGGTGAAGATGATGCAATAGGACGCGGCCAATGGG  100

seq1  TTCTCCTTGCTGCTCATCACCTGTGCAGACTCTTCTAATTCCAACAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTGCTGCTCATCACCTGTGCAGACTCTTCTAATTCCAACAAAGG  150

seq1  TGGACAAGTTCATGAGCCCCCCCTGAGCACACCAGGGAACACACTGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAGTTCATGAGCCCCCCCTGAGCACACCAGGGAACACACTGAACA  200

seq1  GTTACAATAATTGCATCAGGATGCCATATTTTAGGTTTAGAGATAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAATAATTGCATCAGGATGCCATATTTTAGGTTTAGAGATAATAAA  250

seq1  ACAGCTTTTGGGGGGATTATATTATAGACATGACACACTATGCTGCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTGGGGGGATTATATTATAGACATGACACACTATGCTGCTTAA  300

seq1  ACGTTAACATAAGTGAGGAGCAGCTTGATCACTCATGCATTCAGAGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTAACATAAGTGAGGAGCAGCTTGATCACTCATGCATTCAGAGTGTG  350

seq1  CTGAACATCCCCAGGCTTTACAATTTACAGTTGTAAACAGAGCAAGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACATCCCCAGGCTTTACAATTTACAGTTGTAAACAGAGCAAGGCCA  400

seq1  CCCTAAGTATTCCTCATGCCTCTCCATGTGGGACAAGCTACAGGCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGTATTCCTCATGCCTCTCCATGTGGGACAAGCTACAGGCAAGAC  450

seq1  TCACAAACAGCTTTTTATGATAGAGTTTAGGAGAATGCCCTATTCTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACAGCTTTTTATGATAGAGTTTAGGAGAATGCCCTATTCTTTGA  500

seq1  ATTTTGATGGGCATACTACAAGGAACCTTCTTCACATTGTTTTTTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATGGGCATACTACAAGGAACCTTCTTCACATTGTTTTTTTTTTA  550

seq1  ATCTTATGTACAGTACACAACTGACTTTCTAAAATGTCTAATGTTCTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGTACAGTACACAACTGACTTTCTAAAATGTCTAATGTTCTGAT  600

seq1  GACAACTCATCTTAAAAATTGCAGGACTCCACTGGCTCACAGTGTGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTCATCTTAAAAATTGCAGGACTCCACTGGCTCACAGTGTGATTG  650

seq1  GCAGTCATCCTGTCTCTTCCACTGTACAATCCAAACAAACTTTGGGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCATCCTGTCTCTTCCACTGTACAATCCAAACAAACTTTGGGCAAA  700

seq1  TATGAAGAGGGACACCATTTTCAAACTTCATGCTCCATAATTATTTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAGGGACACCATTTTCAAACTTCATGCTCCATAATTATTTTCTA  750

seq1  GAACTAGGGAGATGTCAGCCAGATATCTTTGATATGATACACTGAGGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGGGAGATGTCAGCCAGATATCTTTGATATGATACACTGAGGTGC  800

seq1  CTTTGTGGAGATGACCACTGACAGTCAGTCACAGCTCTGCCCTGTTCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGAGATGACCACTGACAGTCAGTCACAGCTCTGCCCTGTTCAGG  850

seq1  GAAGCAAATGGTTACTTGCTCAGGCAGTGTCTTAGAGTTTTTATTGCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAATGGTTACTTGCTCAGGCAGTGTCTTAGAGTTTTTATTGCTGC  900

seq1  TGTGAACACACACCATGACCATGGCATCTTGTATAAAGGAAAACATTTAA  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTG-ACACACACCATGACCATGGCATCTTGTATAAAGGAAAACATTTAA  949

seq1  TTGGGGCTGCTTACAGTTTCAGAGGCTTGGTCCATTGTCTTCATGGTGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCTGCTTACAGTTTCAGAGGCTTGGTCCATTGTCTTCATGGTGGG  999

seq1  AAGCATGGTGGTATGCAGGCAGACATGGTGCTAGAGAGGTAGCTGAGAGT  1050
      |||||||||| |||||||||||| ||| ||||||| ||||||||||||||
seq2  AAGCATGGTGTTATGCAGGCAGAAATGTTGCTAGAAAGGTAGCTGAGAGT  1049

seq1  TCTACATCTTGATTGGCAGGCAGTGGAGACAGTGAGCAACTTGTCTTGGC  1100
      |||||||| ||| |||||||||||||||||  ||||| ||||||||  ||
seq2  TCTACATC-TGAATGGCAGGCAGTGGAGACGTTGAGC-ACTTGTCT--GC  1095

seq1  TTCAGCTTCGGAAACTGCAA  1120
      ||| ||||| ||||||||||
seq2  TTC-GCTTCCGAAACTGCAA  1114