BAC Information

Click to search

BAC

Clone NameB6Ng01-070I05
Chromosome3 (Build37)
Map Location 74,491,952 - 74,493,075
singlet/doubletsinglet
Overlap genenone
Upstream geneBche, LOC667425, LOC619764, LOC667434
Downstream geneLOC100041551, EG667459, BC050789, Serpini2, Wdr49, Pdcd10, Serpini1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070I05.bB6Ng01-070I05.g
ACCDH888497DH888498
length6401,107
definitionDH888497|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I05, 5' end.DH888498|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtaccccatttttaattggtttatttggatt
tattgtagtctagctacttgtgttcctcatatattttttatattagtact
ctatcagatgtaggcttagtgaggaccttttcccaatctgtagatttcta
tttttcctattcacggtgtcttttgccatagagaagtgtttgtcaatctt
tgatcttagatcctgagtcagtggtgctctgttcagggaaatttcccctg
tgccaatgtattctaggctattgccactttttcttctattagattcagtg
catctggttttatattgagctccttgatctacctggacttaagcatttta
tcattattcaatgataaatatgaatcattttgcattcatccaagagcaga
ctgtcagttagacaagcaccatttgttgctttctgatttccactgtaaag
ttttggcttctttgtcaaagatcaagtgtccataggtgtatgtgtttatt
tctgtgtcttcaaatctaacccaggcacatatgtagcagaggactacata
tgtgggagtgtgtcctcagtggaagaggatgcacctaatcctgtagaggc
ttggtgtagtagagaagggagatggggttaatgtgggagt

gaattctgcttacttttaagaaacttgggctacaattacctgactctctt
gacattttattaacagaatgatttttaagtagaaacatgaattagactca
cagagtgaacatttaaaagtataatttagtaatgtgcattcacatttgat
taaaataagctatggatgtagaaattcaagtttaaataacttattagaca
tcctgcataatactatgacatgatgttaattttttattagatattttctt
catttacatttcaaatgctatccccaaagtcctcataccctccccccacc
ctgcttcccaacccacccactcccgcttcctggccctggcattccactgt
aattgggcatatataacttgtacatatattagagtattagaatacaatat
actcaaatagataatgactcatatctgaaaaaaaaaaaaaaaacaatgtt
aagatcccctttcttataagtgaaaaaagtgcccaaaaggacaccttcca
tttggaagtctagaaaatcatgaatttatctaagaggccttaatatactt
ttgttcctcagtaattcatgagtaagtcttagatccacattatgtttgcc
tgtgtacttattctttaagaagttagataaaactcaagtaaaacattttg
gcatttgattaactgaaggaagtaaaaaacctctacaacaaaatcattaa
acctgtgaagaaaatattgaggaagatattaaaatgacaagacctcctgc
agccatggattggtataattaataacatggaaaagataatctattttgaa
aagcaatttccagtttctgtgcaattccaatcaaacccccacaacattct
atacagaaacaaacaaacaaaaaataaaaaggtgtaagttacagatggaa
gcacaatatatcccagatggtctaatcaattatcagaaaatgaactatgc
tgaagtgatactataccagttcaagctatattatagagtatagtacagta
cagcatgatgtagcatgaaaaagatgtgaagatgtgatgaaggagaagaa
atactatatcttattatgtttaacaaatgacaaaatacacataaaagaag
atacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74491952_74493075
seq2: B6Ng01-070I05.g_67_1173 (reverse)

seq1  GATGTTATCTTTCTTTTAATGTGTATTTTGTCATTTTGTTAAACATAATA  50
      |||| |||| ||||||| ||||||||||||||| ||||||||||||||||
seq2  GATG-TATC-TTCTTTT-ATGTGTATTTTGTCA-TTTGTTAAACATAATA  46

seq1  AGATATAGTTATATCTTCTCTTTCATCCAACAATCTTCACATCTGTTTTC  100
      |||||||| ||| ||||||| ||||||  || |||||||||||| |||||
seq2  AGATATAG-TATTTCTTCTCCTTCATC--AC-ATCTTCACATCT-TTTTC  91

seq1  ATGCTTACATCATGCTGTTACTGTTACTATAACTCTATAATATAGCTTTG  150
      |||| |||||||||||| ||||| |||||| ||||||||||||||| |||
seq2  ATGC-TACATCATGCTG-TACTG-TACTAT-ACTCTATAATATAGC-TTG  136

seq1  AACTGGTATAGTAATCACTTCAGCATAGTTCATTTTTCCTGATAATTGAT  200
      |||||||||||| |||||||||||||||||||||||  ||||||||||||
seq2  AACTGGTATAGT-ATCACTTCAGCATAGTTCATTTT--CTGATAATTGAT  183

seq1  TAGACCATCTGGGATATATTGTGCTTCCATCTGTAACTTACACCTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCATCTGGGATATATTGTGCTTCCATCTGTAACTTACACCTTTTTA  233

seq1  TTTTTTGTTTGTTTGTTTCTGTATAGAATGTTGTGGGGGTTTGATTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTGTTTGTTTCTGTATAGAATGTTGTGGGGGTTTGATTGGAA  283

seq1  TTGCACAGAAACTGGAAATTGCTTTTCAAAATAGATTATCTTTTCCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAGAAACTGGAAATTGCTTTTCAAAATAGATTATCTTTTCCATGT  333

seq1  TATTAATTATACCAATCCATGGCTGCAGGAGGTCTTGTCATTTTAATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTATACCAATCCATGGCTGCAGGAGGTCTTGTCATTTTAATATC  383

seq1  TTCCTCAATATTTTCTTCACAGGTTTAATGATTTTGTTGTAGAGGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAATATTTTCTTCACAGGTTTAATGATTTTGTTGTAGAGGTTTTT  433

seq1  TACTTCCTTCAGTTAATCAAATGCCAAAATGTTTTACTTGAGTTTTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTTCAGTTAATCAAATGCCAAAATGTTTTACTTGAGTTTTATCT  483

seq1  AACTTCTTAAAGAATAAGTACACAGGCAAACATAATGTGGATCTAAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTAAAGAATAAGTACACAGGCAAACATAATGTGGATCTAAGACT  533

seq1  TACTCATGAATTACTGAGGAACAAAAGTATATTAAGGCCTCTTAGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGAATTACTGAGGAACAAAAGTATATTAAGGCCTCTTAGATAAA  583

seq1  TTCATGATTTTCTAGACTTCCAAATGGAAGGTGTCCTTTTGGGCACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATTTTCTAGACTTCCAAATGGAAGGTGTCCTTTTGGGCACTTTT  633

seq1  TTCACTTATAAGAAAGGGGATCTTAACATTGTTTTTTTTTTTTTTTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTATAAGAAAGGGGATCTTAACATTGTTTTTTTTTTTTTTTTCAG  683

seq1  ATATGAGTCATTATCTATTTGAGTATATTGTATTCTAATACTCTAATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTCATTATCTATTTGAGTATATTGTATTCTAATACTCTAATATA  733

seq1  TGTACAAGTTATATATGCCCAATTACAGTGGAATGCCAGGGCCAGGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAGTTATATATGCCCAATTACAGTGGAATGCCAGGGCCAGGAAGC  783

seq1  GGGAGTGGGTGGGTTGGGAAGCAGGGTGGGGGGAGGGTATGAGGACTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGGTGGGTTGGGAAGCAGGGTGGGGGGAGGGTATGAGGACTTTG  833

seq1  GGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAATTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAATTAAC  883

seq1  ATCATGTCATAGTATTATGCAGGATGTCTAATAAGTTATTTAAACTTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTCATAGTATTATGCAGGATGTCTAATAAGTTATTTAAACTTGAA  933

seq1  TTTCTACATCCATAGCTTATTTTAATCAAATGTGAATGCACATTACTAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACATCCATAGCTTATTTTAATCAAATGTGAATGCACATTACTAAA  983

seq1  TTATACTTTTAAATGTTCACTCTGTGAGTCTAATTCATGTTTCTACTTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTTTAAATGTTCACTCTGTGAGTCTAATTCATGTTTCTACTTAA  1033

seq1  AAATCATTCTGTTAATAAAATGTCAAGAGAGTCAGGTAATTGTAGCCCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTCTGTTAATAAAATGTCAAGAGAGTCAGGTAATTGTAGCCCAA  1083

seq1  GTTTCTTAAAAGTAAGCAGAATTC  1124
      ||||||||||||||||||||||||
seq2  GTTTCTTAAAAGTAAGCAGAATTC  1107


| Home | SequenceCutter | Blast | Download |