BAC Information

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BAC

Clone NameB6Ng01-070I13
Chromosome3 (Build37)
Map Location 107,430,349 - 107,578,901
singlet/doubletdoublet
Overlap gene6330569M22Rik, Ahcyl1, Csf1
Upstream gene4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4, Slc6a17, Ubl4b, Alx3
Downstream geneLOC280047, Eps8l3, Gstm5, LOC671031, Gstm7, Gstm6, LOC668674, Gstm3, LOC624701, Gstm2, Gstm1, LOC100043641, Gstm4, Ampd2, Gnat2, Gnai3, Gpr61, LOC100043654, Amigo1, Cyb561d1, Atxn7l2, Sypl2, LOC668686, Psma5, Sort1, Mybphl, Psrc1, Celsr2, Sars, 5330417C22Rik, 1700013F07Rik, 2010200O16Rik, Taf13, Wdr47, LOC100043166, Clcc1, Gpsm2, 4921525H12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070I13.bB6Ng01-070I13.g
ACCDH888510DH888511
length8371,197
definitionDH888510|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I13, 5' end.DH888511|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,578,063 - 107,578,901)(107,430,349 - 107,431,548)
sequence
gaattccccgtagcttgaggaacaagcaaactgcaaagattccaagggga
gggtttcagtatcaagggccctcccctccagaggcaagtccctgcttttc
ccctggaaattgaccgttgtgacccagactgtcccttagaggtccagtat
gcagttcaatgccttttgattctcagaggggagtctcagcagactctctc
agctccctataagccagatccctctccctggcttctcagggtcttctaat
tctttcagagcctatctccccgacaatttccttctctggctatttttcct
tcttcaaactctcctacacaggaaaatgtctgaagagaagacccgaggtc
tgtttttctttctctggtctgggcacatccccagtgtggcagcaagagtc
gggaacacctggcctgtgctctccgctgctgctgccatgagctctgtctt
gggactagtctctgaactgttcgagtccatacatgctcctctataccctg
gggatgcccttcccagctggtatcgtcaaggctctgccagtttgccatag
ggaaaacttagaggaggacatttgaacagagacctgaaaatggcgatgga
gagagaggacagtaactttgggaaaggttttccggcagaaggaggctctc
aggcaagggtggctgtgaggttgaagggggcggggaatatgagaggttgg
gggaatgaagtcagagatctcagagagcctcatctctcagggagcttgcc
tttttttgtctaagtgtcagtcttgagcagggaagtaacaggatccgagt
cacactttgaaaaattccgtgtagagagaactccctg
gaattctggtccttctgtgtagctgtaaagctctgtcaaagagcaaagtt
gtctcctatccacatcagatctcccatgcagcagagaaattcaggctttc
cttcccagccccaactccattcctgtctgattcacagtgactctgactac
tctctctaatcactgagtgaggaaggcctcagtgttctgatgtgctcgaa
gagatcacaggggccactgcactgtcagtggatcatagatccaggcattt
ctagtaagatgtgcatcaaactgcgctgtatcagaggtggccatcaccct
gaatctatgcctttagtgtcacgtcccgaggaatgcttgtgaagactgga
ggagaagcagctcctgctgacctcacactccccatcaacagcagtagcag
caacagatgtgccaagatgcaagcacagtggctagcattcccgtgactca
ctcatgtgtgagagatcactgttcatttggtatgtcaatgagtaccacca
ttgacattacatgggactgggcgctaaccaattcagttgacttcaaacct
gagtcttcgtggaaataaaaggcaatcccaaatgtccacatacgtggtcc
aacttaaacagctaatttatgtttcaaatatcattaataggaataagtag
gaaaacagccagtcttaatcttcttaggaacccagttaaaactcccatca
aagaacacaaaggcctgttctttacctgcaagctctgcagcccacttgtc
tgtgtcggcatactcaaactccaggtctggagattcggaatagccctggt
gaatgaaaagatcgtcacataaagatcctcctgagactttacgggtaaac
acgtctcagagactgcactgcgtgacgtcaatgcctctacttttttcttg
atgtttatcacaatattttgtctcctgaactaatggaagtcccctttacg
ccctgtccagcacctgtatttcaccttcaagcacccactctgtactacaa
ttattcactgaatttttcttttttcatcttcctcttcgtaagacagcaag
ttcctcaaaacagaaacttttgtttactgaccattgcttctcgtaaatac
ctgttcaataataaacacaactttctatctacggtggtggcagtaactga
ccactctcataatgaactgaatattctggagttcactctttctgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_107578063_107578901
seq2: B6Ng01-070I13.b_46_882 (reverse)

seq1  CAGGGAGTTCTCTCTACAGGGAAATCTTTCAAAAGTGTGACTCGGATCCT  50
      |||||||||||||||||| || ||| |||| |||||||||||||||||||
seq2  CAGGGAGTTCTCTCTACACGG-AATTTTTC-AAAGTGTGACTCGGATCCT  48

seq1  GTTACTTCCCTGCTCAAGACTGACACTTAGAC-AAAAAAGGCAAGCTCCC  99
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTACTTCCCTGCTCAAGACTGACACTTAGACAAAAAAAGGCAAGCTCCC  98

seq1  TGGAGAGATGAGGCTCTCTGAGATCTCTGACTTCATTCCCCCAACCTCTC  149
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GAGAGATGAGGCTCTCTGAGATCTCTGACTTCATTCCCCCAACCTCTC  147

seq1  ATATTCCCCGCCCCCTTCAACCTCACAGCCACCCTTGCCTGAGAGCCTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCCGCCCCCTTCAACCTCACAGCCACCCTTGCCTGAGAGCCTCC  197

seq1  TTCTGCCGGAAAACCTTTCCCAAAGTTACTGTCCTCTCTCTCCATCGCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCGGAAAACCTTTCCCAAAGTTACTGTCCTCTCTCTCCATCGCCA  247

seq1  TTTTCAGGTCTCTGTTCAAATGTCCTCCTCTAAGTTTTCCCTATGGCAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGTCTCTGTTCAAATGTCCTCCTCTAAGTTTTCCCTATGGCAAA  297

seq1  CTGGCAGAGCCTTGACGATACCAGCTGGGAAGGGCATCCCCAGGGTATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGCCTTGACGATACCAGCTGGGAAGGGCATCCCCAGGGTATAG  347

seq1  AGGAGCATGTATGGACTCGAACAGTTCAGAGACTAGTCCCAAGACAGAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCATGTATGGACTCGAACAGTTCAGAGACTAGTCCCAAGACAGAGC  397

seq1  TCATGGCAGCAGCAGCGGAGAGCACAGGCCAGGTGTTCCCGACTCTTGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCAGCAGCAGCGGAGAGCACAGGCCAGGTGTTCCCGACTCTTGCT  447

seq1  GCCACACTGGGGATGTGCCCAGACCAGAGAAAGAAAAACAGACCTCGGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTGGGGATGTGCCCAGACCAGAGAAAGAAAAACAGACCTCGGGT  497

seq1  CTTCTCTTCAGACATTTTCCTGTGTAGGAGAGTTTGAAGAAGGAAAAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTCAGACATTTTCCTGTGTAGGAGAGTTTGAAGAAGGAAAAATA  547

seq1  GCCAGAGAAGGAAATTGTCGGGGAGATAGGCTCTGAAAGAATTAGAAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGAAGGAAATTGTCGGGGAGATAGGCTCTGAAAGAATTAGAAGAC  597

seq1  CCTGAGAAGCCAGGGAGAGGGATCTGGCTTATAGGGAGCTGAGAGAGTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAAGCCAGGGAGAGGGATCTGGCTTATAGGGAGCTGAGAGAGTCT  647

seq1  GCTGAGACTCCCCTCTGAGAATCAAAAGGCATTGAACTGCATACTGGACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGACTCCCCTCTGAGAATCAAAAGGCATTGAACTGCATACTGGACC  697

seq1  TCTAAGGGACAGTCTGGGTCACAACGGTCAATTTCCAGGGGAAAAGCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGGACAGTCTGGGTCACAACGGTCAATTTCCAGGGGAAAAGCAGG  747

seq1  GACTTGCCTCTGGAGGGGAGGGCCCTTGATACTGAAACCCTCCCCTTGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCCTCTGGAGGGGAGGGCCCTTGATACTGAAACCCTCCCCTTGGA  797

seq1  ATCTTTGCAGTTTGCTTGTTCCTCAAGCTACGGGGAATTC  839
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGCAGTTTGCTTGTTCCTCAAGCTACGGGGAATTC  837

seq1: chr3_107430349_107431548
seq2: B6Ng01-070I13.g_69_1265

seq1  GAATTCTGGTCCTTCTGTGTAGCTGTAAAGCTCTGTCAAAGAGCAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCCTTCTGTGTAGCTGTAAAGCTCTGTCAAAGAGCAAAGTT  50

seq1  GTCTCCTATCCACATCAGATCTCCCATGCAGCAGAGAAATTCAGGCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTATCCACATCAGATCTCCCATGCAGCAGAGAAATTCAGGCTTTC  100

seq1  CTTCCCAGCCCCAACTCCATTCCTGTCTGATTCACAGTGACTCTGACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCCCCAACTCCATTCCTGTCTGATTCACAGTGACTCTGACTAC  150

seq1  TCTCTCTAATCACTGAGTGAGGAAGGCCTCAGTGTTCTGATGTGCTCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTAATCACTGAGTGAGGAAGGCCTCAGTGTTCTGATGTGCTCGAA  200

seq1  GAGATCACAGGGGCCACTGCACTGTCAGTGGATCATAGATCCAGGCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCACAGGGGCCACTGCACTGTCAGTGGATCATAGATCCAGGCATTT  250

seq1  CTAGTAAGATGTGCATCAAACTGCGCTGTATCAGAGGTGGCCATCACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAGATGTGCATCAAACTGCGCTGTATCAGAGGTGGCCATCACCCT  300

seq1  GAATCTATGCCTTTAGTGTCACGTCCCGAGGAATGCTTGTGAAGACTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTATGCCTTTAGTGTCACGTCCCGAGGAATGCTTGTGAAGACTGGA  350

seq1  GGAGAAGCAGCTCCTGCTGACCTCACACTCCCCATCAACAGCAGTAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCAGCTCCTGCTGACCTCACACTCCCCATCAACAGCAGTAGCAG  400

seq1  CAACAGATGTGCCAAGATGCAAGCACAGTGGCTAGCATTCCCGTGACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATGTGCCAAGATGCAAGCACAGTGGCTAGCATTCCCGTGACTCA  450

seq1  CTCATGTGTGAGAGATCACTGTTCATTTGGTATGTCAATGAGTACCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTGTGAGAGATCACTGTTCATTTGGTATGTCAATGAGTACCACCA  500

seq1  TTGACATTACATGGGACTGGGCGCTAACCAATTCAGTTGACTTCAAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTACATGGGACTGGGCGCTAACCAATTCAGTTGACTTCAAACCT  550

seq1  GAGTCTTCGTGGAAATAAAAGGCAATCCCAAATGTCCACATACGTGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTCGTGGAAATAAAAGGCAATCCCAAATGTCCACATACGTGGTCC  600

seq1  AACTTAAACAGCTAATTTATGTTTCAAATATCATTAATAGGAATAAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAACAGCTAATTTATGTTTCAAATATCATTAATAGGAATAAGTAG  650

seq1  GAAAACAGCCAGTCTTAATCTTCTTAGGAACCCAGTTAAAACTCCCATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGCCAGTCTTAATCTTCTTAGGAACCCAGTTAAAACTCCCATCA  700

seq1  AAGAACACAAAGGCCTGTTCTTTACCTGCAAGCTCTGCAGCCCACTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACAAAGGCCTGTTCTTTACCTGCAAGCTCTGCAGCCCACTTGTC  750

seq1  TGTGTCGGCATACTCAAACTCCAGGTCTGGAGATTCGGAATAGCCCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGGCATACTCAAACTCCAGGTCTGGAGATTCGGAATAGCCCTGGT  800

seq1  GAATGAAAAGATCGTCACATAAAGATCCTCCTGAGACTTTACGGGTAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAAGATCGTCACATAAAGATCCTCCTGAGACTTTACGGGTAAAC  850

seq1  ACGTCTCAGAGACTGCACTGCGTGACGTCAATGCCTCTAC-TTTTTCTTG  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACGTCTCAGAGACTGCACTGCGTGACGTCAATGCCTCTACTTTTTTCTTG  900

seq1  ATGTTTTATCACAATATTTTGTCTCCTGAACTAATGGAAGTCCCCTTTAC  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATG-TTTATCACAATATTTTGTCTCCTGAACTAATGGAAGTCCCCTTTAC  949

seq1  GCCCTGTCCAGCACCCTGTATTTCACCTTCAAAGCACCCACTCTGTACTA  999
      ||||||||||||| |||||||||||||||| |||||||||||||||||||
seq2  GCCCTGTCCAGCA-CCTGTATTTCACCTTC-AAGCACCCACTCTGTACTA  997

seq1  CAATTATTCACTGAATTTTTCTTTTTTCATCTTCCTCTCCGTAAGACAGC  1049
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAATTATTCACTGAATTTTTCTTTTTTCATCTTCCTCTTCGTAAGACAGC  1047

seq1  AAGTTCCTCAAAACAGAAACTCTGTTTTACTGACCATTGCTCTCCGTGAC  1099
      ||||||||||||||||||||| |  ||||||||||||||||   ||| | 
seq2  AAGTTCCTCAAAACAGAAACTTTTGTTTACTGACCATTGCTTCTCGT-AA  1096

seq1  ATACCTGTTCAATAATAAACACAAAACTTCTATCTACGTTG--TGCAGTA  1147
      |||||||||||||||||||||| ||  ||||||||||| ||   ||||||
seq2  ATACCTGTTCAATAATAAACAC-AACTTTCTATCTACGGTGGTGGCAGTA  1145

seq1  ACTGACCACTC-CATATAGTACTGAATATCTGGGAGTCTCACTTCTTTCT  1196
      ||||||||||| ||||  | |||||||||   ||||| |||| |||||||
seq2  ACTGACCACTCTCATAATGAACTGAATATTCTGGAGT-TCAC-TCTTTCT  1193

seq1  GAGC  1200
      ||||
seq2  GAGC  1197