BAC Information

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BAC

Clone NameB6Ng01-070J10
Chromosome3 (Build37)
Map Location 9,150,458 - 9,202,758
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC633072, LOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52, LOC100041389, LOC667886
Downstream geneZbtb10, Zfp704, Pag1, LOC621504, Fabp5, LOC100041480, Pmp2, Fabp9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070J10.bB6Ng01-070J10.g
ACCDH888548DH888549
length581421
definitionDH888548|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J10, 5' end.DH888549|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,202,172 - 9,202,758)(9,150,458 - 9,150,884)
sequence
agggtaggtgaagcaggcactgaagagggaatgcttccaattggtgggtt
gacctatcgttttcaccgttctagtaacagagtcctcacaactagattgt
accttcgtcccactcagagaaacttacagcaatgtaccttttcctgtatt
tcagggttttctagttgagccggaaccagaccacgccgtgagccatttca
ctgggctgttccagagtactgcactgagcctcgggacagttgaaatccca
agggtcttatccctgaagtgagtcaaattaaagatacgtatttgtttcct
tgatgcaaacagcaaaaatgttcaaattagaaacgaacctttggctttct
aaaccacagaaatgcaagatggtgtctcctagtgcaccaattcgtatttt
tggcaagcaagtgatctttgtactgtaccaggtagcaggaatcttgttaa
aatgcttgaactgtaacttcctggaagagtcagggttctagcctgagagt
tttagtcacagagctcaaatccagagacagcaccagaaaccacccatatc
cttgaccggaggacatggaggggagggaagg
acgcagtaggagacagagaacctggtctcacattgtcctctgacttccat
gtgtgtgtcatggcatgaatacataaatgtaacaataaatgtgaacagta
agattatgcccaaggggtttgcaaccccatgggaagaacaacaatatcaa
ccaaccagactcaccccacccccagatctcccagggactaaaccaccacc
agagtacacatggagggacccatggctccagccacatatgtagtagagga
tggcattgtctggcatcaatgggaggagaagcccttggtctgtgaaagct
cgatgccccagtgtaggggaactgaggtggggtggaaggagtggtggttg
gatcaggtacaccctcatagaggcagacggggatttgattgggggtttcc
gggatggggacaggtaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_9202172_9202758
seq2: B6Ng01-070J10.b_47_633 (reverse)

seq1  CCTTCCCTCCCCTCCATGTCCTCCGGTCAAGGATATGGGTGGTTTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTCCCCTCCATGTCCTCCGGTCAAGGATATGGGTGGTTTCTGGT  50

seq1  GCTGTCTCTGGATTTGAGCTCTGTGACTAAAACTCTCAGGCTAGAACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCTGGATTTGAGCTCTGTGACTAAAACTCTCAGGCTAGAACCCT  100

seq1  GACTCTTCCAGGAAGTTACAGTTCAAGCATTTTAACAAGATTCCTGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTCCAGGAAGTTACAGTTCAAGCATTTTAACAAGATTCCTGCTAC  150

seq1  CTGGTACAGTACAAAGATCACTTGCTTGCCAAAAATACGAATTGGTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACAGTACAAAGATCACTTGCTTGCCAAAAATACGAATTGGTGCAC  200

seq1  TAGGAGACACCATCTTGCATTTCTGTGGTTTAGAAAGCCAAAGGTTCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGACACCATCTTGCATTTCTGTGGTTTAGAAAGCCAAAGGTTCGTT  250

seq1  TCTAATTTGAACATTTTTGCTGTTTGCATCAAGGAAACAAATACGTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTGAACATTTTTGCTGTTTGCATCAAGGAAACAAATACGTATCT  300

seq1  TTAATTTGACTCACTTCAGGGATAAGACCCTTGGGATTTCAACTGTCCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGACTCACTTCAGGGATAAGACCCTTGGGATTTCAACTGTCCCG  350

seq1  AGGCTCAGTGCAGTACTCTGGAACAGCCCAGTGAAATGGCTCACGGCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGTGCAGTACTCTGGAACAGCCCAGTGAAATGGCTCACGGCGTG  400

seq1  GTCTGGTTCCGGCTCAACTAGAAAACCCTGAAATACAGGAAAAGGTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTTCCGGCTCAACTAGAAAACCCTGAAATACAGGAAAAGGTACAT  450

seq1  TGCTGTAAGTTTCTCTGAGTGGGACGAAGGTACAATCTAGTTGTGAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAAGTTTCTCTGAGTGGGACGAAGGTACAATCTAGTTGTGAGGAC  500

seq1  TCTGTTACTAGAACGGTGAAAACGATAGGTCAACCCACCAATTGGAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACTAGAACGGTGAAAACGATAGGTCAACCCACCAATTGGAAGCA  550

seq1  TTCCCTCTTCAGTGCCTGCTTCACCTACCCTGAATTC  587
      |||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTCAGTGCCTGCTTCACCTACCCTGAATTC  587

seq1: chr3_9150458_9150884
seq2: B6Ng01-070J10.g_68_494

seq1  GAATTCACGCAGTAGGAGACAGAGAACCTGGTCTCACATTGTCCTCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGCAGTAGGAGACAGAGAACCTGGTCTCACATTGTCCTCTGAC  50

seq1  TTCCATGTGTGTGTCATGGCATGAATACATAAATGTAACAATAAATGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTGTGTGTCATGGCATGAATACATAAATGTAACAATAAATGTGA  100

seq1  ACAGTAAGATTATGCCCAAGGGGTTTGCAACCCCATGGGAAGAACAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGATTATGCCCAAGGGGTTTGCAACCCCATGGGAAGAACAACAA  150

seq1  TATCAACCAACCAGACTCACCCCACCCCCAGATCTCCCAGGGACTAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACCAACCAGACTCACCCCACCCCCAGATCTCCCAGGGACTAAACC  200

seq1  ACCACCAGAGTACACATGGAGGGACCCATGGCTCCAGCCACATATGTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGAGTACACATGGAGGGACCCATGGCTCCAGCCACATATGTAGT  250

seq1  AGAGGATGGCATTGTCTGGCATCAATGGGAGGAGAAGCCCTTGGTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGGCATTGTCTGGCATCAATGGGAGGAGAAGCCCTTGGTCTGTG  300

seq1  AAAGCTCGATGCCCCAGTGTAGGGGAACTGAGGTGGGGTGGAAGGAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCGATGCCCCAGTGTAGGGGAACTGAGGTGGGGTGGAAGGAGTGG  350

seq1  TGGTTGGATCAGGAACACCCTCATAGAGGCAGAGGGGGATAGGATAGGGG  400
      ||||||||||||| ||||||||||||||||||| ||||||  ||| ||||
seq2  TGGTTGGATCAGGTACACCCTCATAGAGGCAGACGGGGATTTGATTGGGG  400

seq1  GTTTCCGGGATGGGGACAGGAAAGGGG  427
      |||||||||||||||||||| ||||||
seq2  GTTTCCGGGATGGGGACAGGTAAGGGG  427