BAC Information

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BAC

Clone NameB6Ng01-070N18
Chromosome3 (Build37)
Map Location 84,948,602 - 84,949,702
singlet/doubletsinglet
Overlap genenone
Upstream geneMnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4, Tmem154, LOC624889, Fbxw7, Dear1
Downstream geneLOC100042237, LOC100042125, Pet112l, 9930021J17Rik, Glt28d2, LOC100042265, Gm1019, Sh3d19, Rps3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070N18.bB6Ng01-070N18.g
ACCDH888726DH888727
length1,2491,095
definitionDH888726|Mus musculus domesticus DNA, BAC clone: B6Ng01-070N18, 5' end.DH888727|Mus musculus domesticus DNA, BAC clone: B6Ng01-070N18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttgcaatgttaaaaaaatgtgcttgctatctttttctaagaa
tcaagggtctaggtcataggctgctgattaatggaataatcaaaagggaa
tctggcgtaatggctgaattgatatgtaaataaaagactgggcttttgat
ctgctagaaatgatattcagagtttttagaattgtatatatgagggagag
agagagagagagagagagacagagagagacagagagagagagaaagagaa
caatctggaaaactgtctcgagcagaacatagggcatcagcttgtagccc
atgatttgacttcaagattttttttctgctgctctcaaaaaccccttctc
tcaggaatgcaccccttcccccaacgctgaggctggtccttggcctggga
ccagctgcagggaggcaaatcaactttacatggggtgattcaaggttaca
taatttcagggaacaagggtatgtgtggggtagaaacatccaggatgggc
aaagttcattggctgggggcttagggtaccaaaatgtctcattagcatgg
ggaagcatttcaggaatctcaggtactagctgaatgggttcttattgggg
gaaaggaagttggacctgtaatcttaatcaaaggtaggtgacattctgca
ggtagaggtatagtgggagttgaactcccctcacaatgacagagaagaag
aacaagtcataccaatgaagggagttctccctattgcacctaattccata
gcactatctggacaatggtagactttgaccttaactatcagagttttccc
acattgcactggtatcagctgatctagaagatagtcaacaatcacaatgg
ttgtcctggtgtatgcatgaaggcataagatagaatacgagatgtagcac
gggggatacttgttactaaaatcagtagcttggtgataggatgtcttgtc
aaacagaccagtgaagaatgtttttcttacgcaacgcacgcatagcttta
ctttcttgcggctgacccatgaaaggactgcgatccagttattgctgaga
catctctacaggtgaggctgagcgatcgagatggctagtttactcatgcc
ttagctgtgtctagctaaagactaacaggatagctgcaccctctgactgc
atgtctggctcctgctcggctggtctccatagaaaacgtcataaggcaat
ggcacttatgtggctcgactatgttgaccctttgaaccgagcttcagga
gaattcaggaccaaggacagtggttcctgctctcagctgctcttccttca
gacacatgacctgctccaacaggagacatacagaccctatccttccttca
aaaacagtagctcagatgaacttgcaggaagggctgctttccgagtgatg
gtcttccttcattgtgtttaaccagaaaagaacacatccaaagccagggt
cggggccagtaaaagggggagttaattctacagatgcaacagcagatctg
ggaaacaggttcttgaggacctttgtcagagtctcacagccacggtgaca
gcccactgagcgtgtctctaaaatcagctcatcaaggcaataaagaccaa
caacacagcccatctggacacatctgggccaagtgatgtctcagcagtgg
gcatccaactctaggtcgtcctcaatgctaggaaacctctttttttcacg
ttctggagcaacatgggagcacaggcatctcctggaataatgtgctcttg
tgagatagaacagaagctagagaggatataaataccctgcaattctctta
aatgcccttatttatagaagtgaaagttggaaaccaggattcttgctgca
atacgaagaaagtagaaactaaataaaaatgaacatttagcatgttatgg
aagggtcagagctctcttagaaggtgctctttgcaaccacaaagaaagga
actgtgttccagtttactcccccaccttctcacacatgtgcacacatgtg
cacacatgcacacacatgcctgtattcttcagcatcctgaggtcaaagga
aaacaataagagattgcaaccgctaggtcacaacagttccctagatttat
cttctttattttatagtgttggggggtttcatgcacgtgcgtgtgtgtgt
acaggtacagtgcacatgtatgcactgggaggaggggtaaagtttgacct
cagaatccttcttcagtcttatctatctttattttttttttttgagccag
gtcttctcactggctggacctcaatatataggtagactctttggcagcaa
cttaagggatctatccatctctgtcttcccaagctgaaactaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84948602_84949702
seq2: B6Ng01-070N18.g_67_1161 (reverse)

seq1  TTTTAGTTTCAGCTTGGGGAAGACAGAGATGGATAGATCCCTAAGTTTGC  50
      ||||||||||||||| |||||||||||||||||||||||||| |  ||||
seq2  TTTTAGTTTCAGCTT-GGGAAGACAGAGATGGATAGATCCCTTAAGTTGC  49

seq1  TGGCCAAAGAGTCTACCCTATATATTGAGGTCCCAGCCAGTGAGAGACCC  100
      | ||||||||||||| ||||||||||||||| |||||||||||||   ||
seq2  T-GCCAAAGAGTCTA-CCTATATATTGAGGT-CCAGCCAGTGAGAAGACC  96

seq1  TGGCTCAAAAAAAAAAAATAAAGATAGATAAGACCTGAAGAAGGATTCTT  150
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  TGGCTCAAAAAAAAAAAATAAAGATAGATAAGA-CTGAAGAAGGATTC-T  144

seq1  GAGGTCAAACTTTACCCCTCCTCCCAGTGCATACATGTGCACTGTACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAAACTTTACCCCTCCTCCCAGTGCATACATGTGCACTGTACCTG  194

seq1  TACACACACACGCACGTGCATGAAACCCCCCAACACTATAAAATAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACGCACGTGCATGAAACCCCCCAACACTATAAAATAAAGAA  244

seq1  GATAAATCTAGGGAACTGTTGTGACCTAGCGGTTGCAATCTCTTATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTAGGGAACTGTTGTGACCTAGCGGTTGCAATCTCTTATTGTT  294

seq1  TTCCTTTGACCTCAGGATGCTGAAGAATACAGGCATGTGTGTGCATGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGACCTCAGGATGCTGAAGAATACAGGCATGTGTGTGCATGTGT  344

seq1  GCACATGTGTGCACATGTGTGAGAAGGTGGGGGAGTAAACTGGAACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTGTGCACATGTGTGAGAAGGTGGGGGAGTAAACTGGAACACAG  394

seq1  TTCCTTTCTTTGTGGTTGCAAAGAGCACCTTCTAAGAGAGCTCTGACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTTTGTGGTTGCAAAGAGCACCTTCTAAGAGAGCTCTGACCCT  444

seq1  TCCATAACATGCTAAATGTTCATTTTTATTTAGTTTCTACTTTCTTCGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAACATGCTAAATGTTCATTTTTATTTAGTTTCTACTTTCTTCGTA  494

seq1  TTGCAGCAAGAATCCTGGTTTCCAACTTTCACTTCTATAAATAAGGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCAAGAATCCTGGTTTCCAACTTTCACTTCTATAAATAAGGGCAT  544

seq1  TTAAGAGAATTGCAGGGTATTTATATCCTCTCTAGCTTCTGTTCTATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGAATTGCAGGGTATTTATATCCTCTCTAGCTTCTGTTCTATCTC  594

seq1  ACAAGAGCACATTATTCCAGGAGATGCCTGTGCTCCCATGTTGCTCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCACATTATTCCAGGAGATGCCTGTGCTCCCATGTTGCTCCAGA  644

seq1  ACGTGAAAAAAAGAGGTTTCCTAGCATTGAGGACGACCTAGAGTTGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAAAAAAAGAGGTTTCCTAGCATTGAGGACGACCTAGAGTTGGATG  694

seq1  CCCACTGCTGAGACATCACTTGGCCCAGATGTGTCCAGATGGGCTGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGCTGAGACATCACTTGGCCCAGATGTGTCCAGATGGGCTGTGTT  744

seq1  GTTGGTCTTTATTGCCTTGATGAGCTGATTTTAGAGACACGCTCAGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTCTTTATTGCCTTGATGAGCTGATTTTAGAGACACGCTCAGTGGG  794

seq1  CTGTCACCGTGGCTGTGAGACTCTGACAAAGGTCCTCAAGAACCTGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACCGTGGCTGTGAGACTCTGACAAAGGTCCTCAAGAACCTGTTTC  844

seq1  CCAGATCTGCTGTTGCATCTGTAGAATTAACTCCCCCTTTTACTGGCCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTGCTGTTGCATCTGTAGAATTAACTCCCCCTTTTACTGGCCCC  894

seq1  GACCCTGGCTTTGGATGTGTTCTTTTCTGGTTAAACACAATGAAGGAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGCTTTGGATGTGTTCTTTTCTGGTTAAACACAATGAAGGAAGA  944

seq1  CCATCACTCGGAAAGCAGCCCTTCCTGCAAGTTCATCTGAGCTACTGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTCGGAAAGCAGCCCTTCCTGCAAGTTCATCTGAGCTACTGTTT  994

seq1  TTGAAGGAAGGATAGGGTCTGTATGTCTCCTGTTGGAGCAGGTCATGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGAAGGATAGGGTCTGTATGTCTCCTGTTGGAGCAGGTCATGTGT  1044

seq1  CTGAAGGAAGAGCAGCTGAGAGCAGGAACCACTGTCCTTGGTCCTGAATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAAGAGCAGCTGAGAGCAGGAACCACTGTCCTTGGTCCTGAATT  1094

seq1  C  1101
      |
seq2  C  1095