BAC Information

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BAC

Clone NameB6Ng01-071B09
Chromosome3 (Build37)
Map Location 112,114,408 - 112,115,623
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668712, LOC625585, EG229746
Downstream geneLOC668717, Utp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071B09.g
ACCDH888888
length1,203
definitionDH888888|Mus musculus domesticus DNA, BAC clone: B6Ng01-071B09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataacgatgaagtcataagaacagagctgaggtgtattttccaa
acattggtgatatacctggggccccactatacagattttacttttaggtc
atacaattgttttagtcacctgagtgctttgggggaaaaaacaaacaaac
agtaaataatccaaggaaatgtactacagaaaatatggcaacccaataac
caacttagaccttaaattcaatgcatagaggcttacttttcattagcctt
tgtaaatatctacactctgacattagcacaattgattgctaatttagaat
tactgaagctatttaaaagaaaggctgattaaaacacatttgagaacaca
ctagctctttccatcttcctgatctccaagactattatgtcttttaaata
aaaataatcaactcagtcaccacttcaatttaattctggaggagtaaata
tttaataatttggtactgaatatagtctagagaggtttcaaaactagagt
accatttagttgatcaatacatgatgcttaattagtctaataaatgcatt
tcaaagtcatacattcattgttcttattttattaacatcactgttatctc
gaatggagtgctgcaatatgcacactttattctctacagccacttaggtt
ctcttcaatcacttaacattacaaaaacaatcataataattaaaaataat
acataactataatgtgttcttaattatattattctttattatcttgctag
aataaaatacaacattagtaatttttgaggatacagtttaccaattgacc
cattattttcagagatgtctcaggtttgtcatctccatttacattcctgt
tttcatattcctgtaaataggaatccctttatctttcttgggatttaaga
ggagagttaataatttcttttgatatattatgaatatctaacaatgtaat
attcagagttctcttttaacactacatagttgagaattaaattttgttta
tttttatattactttatttttttgtatactttacatttatagtaccatag
atcaaatcctgtttttctattatttttttatggaatatttattttattac
atttcaaagtttaccttttgtgccttaccctccaaacacctctatcccat
cctccctccactctgctctctttagtatccagcccaccaccgatctctgc
ctc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112114408_112115623
seq2: B6Ng01-071B09.g_66_1268

seq1  GAATTCATAACGATGAAGTCATAAGAACAGAGCTGAGGTGTATTTTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACGATGAAGTCATAAGAACAGAGCTGAGGTGTATTTTCCAA  50

seq1  ACATTGGTGATATACCTGGGGCCCCACTATACAGATTTTACTTTTAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGTGATATACCTGGGGCCCCACTATACAGATTTTACTTTTAGGTC  100

seq1  ATACAATTGTTTTAGTCACCTGAGTGCTTTGGGGGAAAAAACAAACAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTGTTTTAGTCACCTGAGTGCTTTGGGGGAAAAAACAAACAAAC  150

seq1  AGTAAATAATCCAAGGAAATGTACTACAGAAAATATGGCAACCCAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATAATCCAAGGAAATGTACTACAGAAAATATGGCAACCCAATAAC  200

seq1  CAACTTAGACCTTAAATTCAATGCATAGAGGCTTACTTTTCATTAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGACCTTAAATTCAATGCATAGAGGCTTACTTTTCATTAGCCTT  250

seq1  TGTAAATATCTACACTCTGACATTAGCACAATTGATTGCTAATTTAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATCTACACTCTGACATTAGCACAATTGATTGCTAATTTAGAAT  300

seq1  TACTGAAGCTATTTAAAAGAAAGGCTGATTAAAACACATTTGAGAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGCTATTTAAAAGAAAGGCTGATTAAAACACATTTGAGAACACA  350

seq1  CTAGCTCTTTCCATCTTCCTGATCTCCAAGACTATTATGTCTTTTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCTTTCCATCTTCCTGATCTCCAAGACTATTATGTCTTTTAAATA  400

seq1  AAAATAATCAACTCAGTCACCACTTCAATTTAATTCTGGAGGAGTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATCAACTCAGTCACCACTTCAATTTAATTCTGGAGGAGTAAATA  450

seq1  TTTAATAATTTGGTACTGAATATAGTCTAGAGAGGTTTCAAAACTAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAATTTGGTACTGAATATAGTCTAGAGAGGTTTCAAAACTAGAGT  500

seq1  ACCATTTAGTTGATCAATACATGATGCTTAATTAGTCTAATAAATGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTAGTTGATCAATACATGATGCTTAATTAGTCTAATAAATGCATT  550

seq1  TCAAAGTCATACATTCATTGTTCTTATTTTATTAACATCACTGTTATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCATACATTCATTGTTCTTATTTTATTAACATCACTGTTATCTC  600

seq1  GAATGGAGTGCTGCAATATGCACACTTTATTCTCTACAGCCACTTAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAGTGCTGCAATATGCACACTTTATTCTCTACAGCCACTTAGGTT  650

seq1  CTCTTCAATCACTTAACATTACAAAAACAATCATAATAATTAAAAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAATCACTTAACATTACAAAAACAATCATAATAATTAAAAATAAT  700

seq1  ACATAACTATAATGTGTTCTTAATTATATTATTCTTTATTATCTTGCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTATAATGTGTTCTTAATTATATTATTCTTTATTATCTTGCTAG  750

seq1  AATAAAATACAACATTAGTAATTTTTGAGGATACAGTTTACCAATTGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATACAACATTAGTAATTTTTGAGGATACAGTTTACCAATTGACC  800

seq1  CATTATTTTCAGAGATGTCTCAGGTTTGTCATCTCCATTTACATTCCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTCAGAGATGTCTCAGGTTTGTCATCTCCATTTACATTCCTGT  850

seq1  TTTCATATTCCTGTAAATAGGAATCCCTTTATCTTTCTTGGGATTTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTCCTGTAAATAGGAATCCCTTTATCTTTCTTGGGATTTAAGA  900

seq1  GGAGAGTTAATAATTTCTTTTGATATATTATGAATATCTAACAATGTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTAATAATTTCTTTTGATATATTATGAATATCTAACAATGTAAT  950

seq1  ATTCAGAGTTCTCTTTTAACACTACAATAGTTGAGAATTAAATTTTGTTT  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTCAGAGTTCTCTTTTAACACTAC-ATAGTTGAGAATTAAATTTTGTTT  999

seq1  TATTTTTTATATTACTTTA-TTTTTTGTATACTTTTACATTTATAGTACC  1049
         |||||||||||||||| |||||||||||| |||||||||||||||||
seq2  --ATTTTTATATTACTTTATTTTTTTGTATAC-TTTACATTTATAGTACC  1046

seq1  ATAGATCAAATCCTGTTTTTCTATTATTTTTTTATTGGATATTTTATTTA  1099
      ||||||||||||||||||||||||||||||||||| | ||| ||||||| 
seq2  ATAGATCAAATCCTGTTTTTCTATTATTTTTTTATGGAATA-TTTATTTT  1095

seq1  TTTACATTTCAAATGTTATACCTTTTTGTGCTTTACCCTCCAAAAACACT  1149
       |||||||||||| ||| |||| |||||||| |||||||||||| || ||
seq2  ATTACATTTCAAA-GTT-TACC-TTTTGTGCCTTACCCTCCAAACAC-CT  1141

seq1  CTATCCCATCCTTCCT-CACTCTGCT-TCTATAAGGGTGATCCCCAACCC  1197
      |||||||||||| ||| ||||||||| ||| ||   || ||  ||| |||
seq2  CTATCCCATCCTCCCTCCACTCTGCTCTCTTTA---GT-AT--CCAGCCC  1185

seq1  ACCCACCGACTCCTGCCTC  1216
      | |||||||   |||||||
seq2  A-CCACCGATCTCTGCCTC  1203


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