BAC Information

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BAC

Clone NameB6Ng01-072D23
Chromosome3 (Build37)
Map Location 35,596,772 - 35,597,828
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041108, LOC665655, Ube2l3-ps1, LOC625963
Downstream geneAtp11b, LOC665667, Dcun1d1, Mccc1, BC050811, Acad9, D3Ertd254e, Gpr103, Anxa5, 1810062G17Rik, LOC665709, Exosc9, Ccna2, Bbs7, Trpc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072D23.bB6Ng01-072D23.g
ACCDH889717DH889718
length1,058202
definitionDH889717|Mus musculus domesticus DNA, BAC clone: B6Ng01-072D23, 5' end.DH889718|Mus musculus domesticus DNA, BAC clone: B6Ng01-072D23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaatagcaataaattcacaagctatagcttttgacctgcag
ttcccaagtgatcttgattttcctcaagagtgtggccattagcaatcaca
gattgtattataatcttgattacaggtactaactctgagatcccacatgt
ctgtgcatgcacacacgtgtgtgcaggttacagagtgactgcaaaagatt
agaggggttccaaggtcaaagaaacagagagctgacacggatgaaagact
ccctgtaagcctgttctacagagtgagttccaggacagccaaggctacac
agagaaaccctcaaaaaaaaaaaaaaaaaaaaaaaaagttggctgagatg
ctaaggaacccagcaggagaacagctggaggcaaccaaagctaagccagc
agtggttcaagatgagtgaaggagaagccaatttaaaggttttggatgca
ctagaaacaggtcattagagcatgtgggtccatttcagaaaatgggccct
gttaaggataaagtcccttgtaactgttacgtgttctcagcccatagacc
ttatgtcgtatgcattgtgtagcaagttcctctgagagaaaacattccat
tttggaagggtgcctattaagaaacaggatgttaaaagggaggtgaaacg
gtagtacattctaaggagaggtgaaacgccctatcctgcagggaagcacc
ttaagctcaggaagcaaacaattcagtggcttcaggaagttcctgaaact
gaaaggctagctggtgagaaaggctcagaccaactgagatgcctggaaaa
gacactctccaacatgcaccttgtgcagtgtgcaccaggtttccaatatt
catgagttcacccatactgaggtgacagctatatttgaatcatgtctact
cccataaaacacctctcacctatattgttataagtaaccccaataaagcc
ctgtggtttatgtctagtttaggtttccatgatcagagagacaccatgac
tagacactcttatatgggataacatttatgggggctgcttacagttcaga
aggttcag
cagactgcagaacacagaactcaagaaggctaacaaaccgatgggcccaa
gtgaggacgcctcaatcctacctgggagatgaaagcaaccacaggaggag
gggggaggaagtgagggagggacctgggtgggaaaggtgacagagagggg
aataggggaacttgatcatgttatgtgttttatttgcttttctttttttt
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_35596772_35597828
seq2: B6Ng01-072D23.b_43_1100

seq1  GAATTCATTGAATAGCAATAAATTCACAAGCTATAGCTTTTGACCTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAATAGCAATAAATTCACAAGCTATAGCTTTTGACCTGCAG  50

seq1  TTCCCAAGTGATCTTGATTTTCCTCAAGAGTGTGGCCATTAGCAATCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAGTGATCTTGATTTTCCTCAAGAGTGTGGCCATTAGCAATCACA  100

seq1  GATTGTATTATAATCTTGATTACAGGTACTAACTCTGAGATCCCACATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTATTATAATCTTGATTACAGGTACTAACTCTGAGATCCCACATGT  150

seq1  CTGTGCATGCACACACGTGTGTGCAGGTTACAGAGTGACTGCAAAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATGCACACACGTGTGTGCAGGTTACAGAGTGACTGCAAAAGATT  200

seq1  AGAGGGGTTCCAAGGTCAAAGAAACAGAGAGCTGACACGGATGAAAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGTTCCAAGGTCAAAGAAACAGAGAGCTGACACGGATGAAAGACT  250

seq1  CCCTGTAAGCCTGTTCTACAGAGTGAGTTCCAGGACAGCCAAGGCTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAAGCCTGTTCTACAGAGTGAGTTCCAGGACAGCCAAGGCTACAC  300

seq1  AGAGAAACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAGTTGGCTGAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAGTTGGCTGAGATG  350

seq1  CTAAGGAACCCAGCAGGAGAACAGCTGGAGGCAACCAAAGCTAAGCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAACCCAGCAGGAGAACAGCTGGAGGCAACCAAAGCTAAGCCAGC  400

seq1  AGTGGTTCAAGATGAGTGAAGGAGAAGCCAATTTAAAGGTTTTGGATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTCAAGATGAGTGAAGGAGAAGCCAATTTAAAGGTTTTGGATGCA  450

seq1  CTAGAAACAGGTCATTAGAGCATGTGGGTCCATTTCAGAAAATGGGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAACAGGTCATTAGAGCATGTGGGTCCATTTCAGAAAATGGGCCCT  500

seq1  GTTAAGGATAAAGTCCCTTGTAACTGTTACGTGTTCTCAGCCCATAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGATAAAGTCCCTTGTAACTGTTACGTGTTCTCAGCCCATAGACC  550

seq1  TTATGTCGTATGCATTGTGTAGCAAGTTCCTCTGAGAGAAAACATTCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCGTATGCATTGTGTAGCAAGTTCCTCTGAGAGAAAACATTCCAT  600

seq1  TTTGGAAGGGTGCCTATTAAGAAACAGGATGTTAAAAGGGAGGTGAAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGGGTGCCTATTAAGAAACAGGATGTTAAAAGGGAGGTGAAACG  650

seq1  GTAGTACATTCTAAGGAGAGGTGAAACGCCCTATCCTGCAGGGAAGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTACATTCTAAGGAGAGGTGAAACGCCCTATCCTGCAGGGAAGCACC  700

seq1  TTAAGCTCAGGAAGCAAACAATTCAGTGGCTTCAGGAAGTTCCTGAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCAGGAAGCAAACAATTCAGTGGCTTCAGGAAGTTCCTGAAACT  750

seq1  GAAAGGCTAGCTGGTGAGAAAGGCTCAGACCAACTGAGATGCCTGGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCTAGCTGGTGAGAAAGGCTCAGACCAACTGAGATGCCTGGAAAA  800

seq1  GACACTCTCCAACATGCACCTTGTGCAGTGTGCACCAGGTTTCCAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCTCCAACATGCACCTTGTGCAGTGTGCACCAGGTTTCCAATATT  850

seq1  CATGAGTTCACCCATACTGAGGTGACAGCTATATTTGAATCATGTCTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTCACCCATACTGAGGTGACAGCTATATTTGAATCATGTCTACT  900

seq1  CCCATAAAACACCTCTCACCTATATTGTTATAAGTAACCCCAATAAAGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAAACACCTCTCACCTATATTGTTATAAGTAACCCCAATAAAGCC  950

seq1  CTGTGGTTTATGTCTTAGTTTAGGTTTCCATTGATCAGAAGAGACACCAT  1000
      |||||||||||||| ||||||||||||||| ||||||| |||||||||||
seq2  CTGTGGTTTATGTC-TAGTTTAGGTTTCCA-TGATCAG-AGAGACACCAT  997

seq1  GACTAAGACAACTCTTATATGGGATAACATTTAATTGGGGCTGCCTTACA  1050
      |||| |||| |||||||||||||||||||||| || ||||||| ||||||
seq2  GACT-AGAC-ACTCTTATATGGGATAACATTT-ATGGGGGCTG-CTTACA  1043

seq1  GGTTCAG---------  1057
       ||||||         
seq2  -GTTCAGAAGGTTCAG  1058