BAC Information

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BAC

Clone NameB6Ng01-073C09
Chromosome3 (Build37)
Map Location 118,512,133 - 118,513,230
singlet/doubletsinglet
Overlap geneDpyd
Upstream geneSnx7, LOC100043260
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073C09.bB6Ng01-073C09.g
ACCDH890366DH890367
length1,078544
definitionDH890366|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C09, 5' end.DH890367|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggagatttgatgggctccactaacatctcttgccatccttc
ctgcatactggatatgatatgctgattcagtctggtttctgatatttcaa
tgctgtcttcccagctgtgatagcttttcagctcctatttcacagaccag
agatacagttggggattacttaactgacaagtgtaacaatttcaattata
tgtttggagaagaggagaatgatcaccgacagggtcagtgtctctaatgg
tccactgggatacagactttagtcaggctccattttacctttcgtatagg
tccctactttgtgtctccaggtatcaatgtcaataaagatcatgtgccta
atagcccttgaaatgcctgattatccctatttcccttgtgcacagttgcc
tgggtaaatggccctcattccctatggggaaccagggtaattattgtagt
atttatttgccagggtactgcagagttctacctaggagcatggtgtcttt
cttgctcagcaggtttccactagggggaaaaaccgattcatgggtcaaag
agatggctctgtggtcagtggcacttaccactgaacctgacagtctgagt
cctatcccctggcccctcatggtcaaggagagaactgacttttaaaagtt
gtcctccatatatgtgacaccctcctccagtttctctccaaaaataagta
taatagtatttttacttaaataatttttgagaccaaccaaaatattgtga
cttacagacagagtgactactctgtctcattgatttcttcatgttgcatg
atcaacatcccctatggaaaccttatgtgttgtaaagatgttattgaaat
attacacttttgactttggctaaaatgagtctttcctactggaactgcat
gctaattgcattatgttgtgtggaatttcccacggaaaacttctctcact
tgacatttggatcctttgacttttgtttccctattatctgttgtcaaatt
aactcctatacaacagggctgtcaacataactagagagaagtttgaaact
ttagtaactttgattcattttttttttt

tactttctttatatattctagaaattagttgtttttcagatttatggctt
gcaaatatttcttgcagttagcctcactgtcctgtgtgttgttaccgtct
ctgtgttaaaagagtctctctggatgcatcgaacctcttccagtcttgcc
tacagtcttctgtctgtgaacatctactttccacatatttctttgggatg
tggatacaattttgttctgtttctaatttttcaatcataaaatggtcttg
aatttgttaaattattttctccatatactgagatgtccgtattttgcctg
ccattcagctcccatggttgtgacagatttgtttatttgaatatgctacc
ctttctatgaatcgtggtgatgacactcagattctgggcgcctctaagtc
ttttaatgataattatataatacttttaatatccctttacttttctagtt
aatacttcactgaagatttttatattcatgttcatgggtatgatgaccta
tagattcccctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118512133_118513230
seq2: B6Ng01-073C09.b_44_1121

seq1  GAATTCAATGGAGATTTGATGGGCTCCACTAACATCTCTTGCCATCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGAGATTTGATGGGCTCCACTAACATCTCTTGCCATCCTTC  50

seq1  CTGCATACTGGATATGATATGCTGATTCAGTCTGGTTTCTGATATTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATACTGGATATGATATGCTGATTCAGTCTGGTTTCTGATATTTCAA  100

seq1  TGCTGTCTTCCCAGCTGTGATAGCTTTTCAGCTCCTATTTCACAGACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTTCCCAGCTGTGATAGCTTTTCAGCTCCTATTTCACAGACCAG  150

seq1  AGATACAGTTGGGGATTACTTAACTGACAAGTGTAACAATTTCAATTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGTTGGGGATTACTTAACTGACAAGTGTAACAATTTCAATTATA  200

seq1  TGTTTGGAGAAGAGGAGAATGATCACCGACAGGGTCAGTGTCTCTAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGAGAAGAGGAGAATGATCACCGACAGGGTCAGTGTCTCTAATGG  250

seq1  TCCACTGGGATACAGACTTTAGTCAGGCTCCATTTTACCTTTCGTATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGGGATACAGACTTTAGTCAGGCTCCATTTTACCTTTCGTATAGG  300

seq1  TCCCTACTTTGTGTCTCCAGGTATCAATGTCAATAAAGATCATGTGCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACTTTGTGTCTCCAGGTATCAATGTCAATAAAGATCATGTGCCTA  350

seq1  ATAGCCCTTGAAATGCCTGATTATCCCTATTTCCCTTGTGCACAGTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTTGAAATGCCTGATTATCCCTATTTCCCTTGTGCACAGTTGCC  400

seq1  TGGGTAAATGGCCCTCATTCCCTATGGGGAACCAGGGTAATTATTGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAATGGCCCTCATTCCCTATGGGGAACCAGGGTAATTATTGTAGT  450

seq1  ATTTATTTGCCAGGGTACTGCAGAGTTCTACCTAGGAGCATGGTGTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGCCAGGGTACTGCAGAGTTCTACCTAGGAGCATGGTGTCTTT  500

seq1  CTTGCTCAGCAGGTTTCCACTAGGGGGAAAAACCGATTCATGGGTCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCAGCAGGTTTCCACTAGGGGGAAAAACCGATTCATGGGTCAAAG  550

seq1  AGATGGCTCTGTGGTCAGTGGCACTTACCACTGAACCTGACAGTCTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCTGTGGTCAGTGGCACTTACCACTGAACCTGACAGTCTGAGT  600

seq1  CCTATCCCCTGGCCCCTCATGGTCAAGGAGAGAACTGACTTTTAAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCCTGGCCCCTCATGGTCAAGGAGAGAACTGACTTTTAAAAGTT  650

seq1  GTCCTCCATATATGTGACACCCTCCTCCAGTTTCTCTCCAAAAATAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCATATATGTGACACCCTCCTCCAGTTTCTCTCCAAAAATAAGTA  700

seq1  TAATAGTATTTTTACTTAAATAATTTTTGAGACCAACCAAAATATTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTATTTTTACTTAAATAATTTTTGAGACCAACCAAAATATTGTGA  750

seq1  CTTACAGACAGAGTGACTACTCTGTCTCATTGATTTCTTCATGTTGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGACAGAGTGACTACTCTGTCTCATTGATTTCTTCATGTTGCATG  800

seq1  ATCAACATCCCCTATGGAAACCTTATGTGTTGTAAAGATGTTATTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATCCCCTATGGAAACCTTATGTGTTGTAAAGATGTTATTGAAAT  850

seq1  ATTACACTTTTGACTTTGGCTAAAATGAGTCTTTCCTACTGGAACTGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTTTTGACTTTGGCTAAAATGAGTCTTTCCTACTGGAACTGCAT  900

seq1  GCTAATTGCATTATGTTGTTGTGTAATTTCCCATGTAAATCTTCTCTCAC  950
      |||||||||||||||||| |||| ||||||||| | ||| ||||||||||
seq2  GCTAATTGCATTATGTTG-TGTGGAATTTCCCACGGAAAACTTCTCTCAC  949

seq1  TTGACATTTTGGATCCTTTTGACTTTTGTTTCCCTTATTATCTTGTTGTT  1000
      |||||| ||||||||| ||||||||||||||||| ||||||| ||||| |
seq2  TTGACA-TTTGGATCC-TTTGACTTTTGTTTCCC-TATTATC-TGTTG-T  994

seq1  CAAATATTATCTCAGATACTAAACAGTGCTTTCAACATAAACTAGGAGAG  1050
      |||  |||| |||  ||||  ||||| ||| ||||||| ||||| |||||
seq2  CAA--ATTAACTCCTATAC--AACAGGGCTGTCAACAT-AACTA-GAGAG  1038

seq1  AAGTTTTGAAAACTTTAGTTAACCTTTTTGAATTTCATTTTTTTTTTT  1098
      ||||||   ||||||||| ||||   |||||  |||||||||||||||
seq2  AAGTTT--GAAACTTTAG-TAAC---TTTGA--TTCATTTTTTTTTTT  1078


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