BAC Information

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BAC

Clone NameB6Ng01-074E21
Chromosome3 (Build37)
Map Location 117,456,447 - 117,457,484
singlet/doubletsinglet
Overlap geneEG668759
Upstream geneAgl, LOC100043710, LOC100043250, Frrs1, Palmd, EG668749, 1700061I17Rik, LOC674908, D3Bwg0562e, 4833424O15Rik
Downstream geneSnx7, LOC100043260, Dpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074E21.bB6Ng01-074E21.g
ACCDH891189DH891190
length1,0921,042
definitionDH891189|Mus musculus domesticus DNA, BAC clone: B6Ng01-074E21, 5' end.DH891190|Mus musculus domesticus DNA, BAC clone: B6Ng01-074E21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tctgtcttattaacagtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcgatactcgatcttacagcacaagccattgctgttc
tgttcaggaattttccccctgtgcccatatcttcgaggtttttccccact
ttctcctctatacgcttcagtgtcactggttttatgtgaagttccttaat
ccacttagatttgaccttagtacaaggagatagtaatggatcaattcaca
ttcttctacatgataactgccagttgtgccagcaccatttgttgaaactg
ctgtcttttttcactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatttctgggtctttaattctattccattggtc
tatttgtctgtcgctataccagtaccatgcagtttttatcacaattgctc
tgcagtacagctttaggtcgggcatggtgattccaccagaggttctttta
tcattgagaagaatttttgctatcctaggttttttgttatttattccaga
tgaatttgcagattgccctttctaattctttgaagaattaagttggactt
ttgatggggattgcattgaatctgtagattgcttttggaaagatagccat
ttttactatattgattctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagttcttatca
tacagatctttcacttccttagttagagtcacgccaagtattttatacct
tgtataattttggtgactattgtgaagggtgttggtttccctaatttctt
tctcagcctgtttatcctttgtttagaggaagggccattggacttttgtt
gaatttatttttatatccagcttcttctactggagcctgttg
gaattcaggactgtactccctctgctccaagggtggcattttggtttaca
gacgtgttgagaaagctctgcttctgcaaattcatactggtaggagacat
gaatatttcaagatcatattcagattgtcttcgggggaaattgtaatctg
gatcccacagctgttgctaagtgaaccagtggggttgtttttcctttagc
taaaccagtagggggttcccaaaacctgtctctactgctagatactctct
gcatttttattactctctataacttcaacaactgtgtttgcaaatgcatg
gtttttaaaatccacttataaattatttatgtcttcatcaactaggaatc
atgcttattcatagattctgtgggggaaaataaagagtatttggacagta
ctagctttttaaaataattttgcaagagacaatgttaagaaggctaactt
ttctaaatagtgttagagggtctaggatggtttcataaaatgcactgtgc
aaacatgctcccaaatgttagaacaggatccctgttttaacctgcctcac
tttttttgtgtgatgctcctttaacacttgaatctagacctcaaggctga
caggtcctatggctgtgaggagttgtgagctatggaaggcagaacgcatc
atattttaagggagataattttctaaaattggacaggcaatgaagaacaa
atatttagtgccaaataaccactacgtacctgttaacaaaacacttattt
gcatatagtagggtctgcaaatatttgacagtctcttggtatttgggggt
tttgttttaaggaattctcgtgatttgtttgtttataatacttttgaatg
acacatgagcatggaggtatattagcaatatactggtatatgttataagt
atacctgccagcactttaatttttcatagtacttgctttagggagagata
gacacaatgaagcattggccctaaatgatagtctcatataagctgaagaa
gagacaattggacttttcagctaaggcttattcattttgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117456447_117457484
seq2: B6Ng01-074E21.g_68_1109 (reverse)

seq1  GGTCAAAATG-ATAAGACTATAGCTGAAAAGTCCAA-TGTCTCTTC-TCA  47
      | |||||||| ||||| || |||||||||||||||| ||||||||| |||
seq2  GTTCAAAATGAATAAGCCT-TAGCTGAAAAGTCCAATTGTCTCTTCTTCA  49

seq1  GCTTATATTGAGACTATCA-TTAGGG-CAATGCTTCA-TGTGTCTATCTC  94
      ||||||| ||||||||||| |||||| |||||||||| ||||||||||||
seq2  GCTTATA-TGAGACTATCATTTAGGGCCAATGCTTCATTGTGTCTATCTC  98

seq1  TTCCTAAAGCAAGTACTATG-AAAATTAAAGTGGCTGGCAGGTATACTTA  143
      | |||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  TCCCTAAAGCAAGTACTATGAAAAATTAAAGT-GCTGGCAGGTATACTTA  147

seq1  TAACATATACCAGTATATTGCTAATATACCTCCATGCTCATGTGTCATTC  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATACCAGTATATTGCTAATATACCTCCATGCTCATGTGTCATTC  197

seq1  AAAAGTATTATAAACAAACAAATCACGAGAATTCCTTAAAACAAAACCCC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATTATAAACAAACAAATCACGAGAATTCCTTAAAACAAAACCCC  247

seq1  CAAATACCAAGAGACTGTCAAATATTTGCAGACCCTACTATATGCAAATA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACCAAGAGACTGTCAAATATTTGCAGACCCTACTATATGCAAATA  297

seq1  AGTGTTTTGTTAACAGGTACGTAGTGGTTATTTGGCACTAAATATTTGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTGTTAACAGGTACGTAGTGGTTATTTGGCACTAAATATTTGTT  347

seq1  CTTCATTGCCTGTCCAATTTTAGAAAATTATCTCCCTTAAAATATGATGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGCCTGTCCAATTTTAGAAAATTATCTCCCTTAAAATATGATGC  397

seq1  GTTCTGCCTTCCATAGCTCACAACTCCTCACAGCCATAGGACCTGTCAGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCCTTCCATAGCTCACAACTCCTCACAGCCATAGGACCTGTCAGC  447

seq1  CTTGAGGTCTAGATTCAAGTGTTAAAGGAGCATCACACAAAAAAAGTGAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTCTAGATTCAAGTGTTAAAGGAGCATCACACAAAAAAAGTGAG  497

seq1  GCAGGTTAAAACAGGGATCCTGTTCTAACATTTGGGAGCATGTTTGCACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTAAAACAGGGATCCTGTTCTAACATTTGGGAGCATGTTTGCACA  547

seq1  GTGCATTTTATGAAACCATCCTAGACCCTCTAACACTATTTAGAAAAGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTTATGAAACCATCCTAGACCCTCTAACACTATTTAGAAAAGTT  597

seq1  AGCCTTCTTAACATTGTCTCTTGCAAAATTATTTTAAAAAGCTAGTACTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTAACATTGTCTCTTGCAAAATTATTTTAAAAAGCTAGTACTG  647

seq1  TCCAAATACTCTTTATTTTCCCCCACAGAATCTATGAATAAGCATGATTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATACTCTTTATTTTCCCCCACAGAATCTATGAATAAGCATGATTC  697

seq1  CTAGTTGATGAAGACATAAATAATTTATAAGTGGATTTTAAAAACCATGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGATGAAGACATAAATAATTTATAAGTGGATTTTAAAAACCATGC  747

seq1  ATTTGCAAACACAGTTGTTGAAGTTATAGAGAGTAATAAAAATGCAGAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAAACACAGTTGTTGAAGTTATAGAGAGTAATAAAAATGCAGAGA  797

seq1  GTATCTAGCAGTAGAGACAGGTTTTGGGAACCCCCTACTGGTTTAGCTAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAGCAGTAGAGACAGGTTTTGGGAACCCCCTACTGGTTTAGCTAA  847

seq1  AGGAAAAACAACCCCACTGGTTCACTTAGCAACAGCTGTGGGATCCAGAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAACAACCCCACTGGTTCACTTAGCAACAGCTGTGGGATCCAGAT  897

seq1  TACAATTTCCCCCGAAGACAATCTGAATATGATCTTGAAATATTCATGTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTCCCCCGAAGACAATCTGAATATGATCTTGAAATATTCATGTC  947

seq1  TCCTACCAGTATGAATTTGCAGAAGCAGAGCTTTCTCAACACGTCTGTAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCAGTATGAATTTGCAGAAGCAGAGCTTTCTCAACACGTCTGTAA  997

seq1  ACCAAAATGCCACCCTTGGAGCAGAGGGAGTACAGTCCTGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATGCCACCCTTGGAGCAGAGGGAGTACAGTCCTGAATTC  1042