BAC Information

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BAC

Clone NameB6Ng01-074F04
Chromosome3 (Build37)
Map Location 130,510,298 - 130,682,528
singlet/doubletdoublet
Overlap geneLOC546811, LOC545568
Upstream geneRrh, Nola1, Cfi, Pla2g12a, Casp6, Ccdc109b, Sec24b, EG668844, EG668845, Col25a1, Agxt2l1, 2310008M10Rik, Rpl34
Downstream geneLef1, 6720418B01Rik, Hadh, Cyp2u1, Sgms2, LOC100043443, Papss1, Olfr375-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074F04.bB6Ng01-074F04.g
ACCDH891203DH891204
length3931,142
definitionDH891203|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F04, 5' end.DH891204|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,682,136 - 130,682,528)(130,510,298 - 130,511,450)
sequence
ttctgactccggtctgtgtattcaccatctccctgcaccaaagtctagtt
tggaaaatgactttagattggagttgtcaaggttctgaaccaggaagaca
caggcacagggcacccagccatgttctagttcccgtcaggggttacccca
ttctagtcctgttcttacttccggccttctcgcttgctcccctccctcat
gctcatagagcctgcacgccttacctttctatttttagtttattgagtgg
ttgctaagtgctttgcacttatatggggtcaattggaaatggagacattt
gtagaacccgaccattctaggaagatttaatcacaggttgtggtaaacac
tcacggagggctggaagactgtgggggatgaggtagggggttg
gaattcctcggtttgtgttttctttattgcttctgtttccattttcaggt
cttgaacagttttactcatttccttcacttgtttgattgtatttttctgt
atttctttaagggatttattcatttcctgtctaaaggcctctatcatcct
cataaggtaagatttaaggtcattttcttgtgctttggctatgttgcagt
atccaaggctagttggaaagctgggctttggtgatgccatattgccctgg
ctgttgttaattatgttcttatgttggcctctgggcatctgggctttggg
attattataggtcgaggtgctgatttctgagttcatctttgttagatgag
tgttttaaacatgcttcttgccttggtttttgtttttgttttccctctgg
ttttctggcctgagtagcctgggattccgatgaacagcaagtcttcaggt
atagtgcaatgtttccaatgtgtttttgttctgttttgtttatttttatt
gtattttttgtggccagcatgacctctgggggtttgggtgctgatgttgc
ctctggggttcctagaacaggtgtggcctccaggaaagcacaggtcttct
gccaatgttggtggccagaatatagggcccaagtgatggggtgcagttac
gtctgttaggtgtgccgtaaggggacttggcagacatagggaataaggtg
gggtcttacctggggtccctggtgctgatgtggcctttgggaaagcagca
acatatagggaatttgagaccagcctggggtacaccaggtgttactgact
agaagagctaggatgtaagactggtctaggtgagggtaactctctcctgg
aagtgtgatatcagagcatgggctttatcaaatatcactgttctcattta
atgcttggctctctttcttcccttacaaatctgtgtaagtgagcctcctg
gatggtatctctcaaggggccctacaggcttctgcttcccaggaggctaa
agccgccttcctagaaccttaggctacaagagagcaccgagagatgtaag
ttacttagtaacttctctcaatcaacttggtggagaaaagtcaagggaga
aaagggatgcaggtggtgggcctttaaatacaaattcatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_130682136_130682528
seq2: B6Ng01-074F04.b_55_447 (reverse)

seq1  CAACCCCCTACCTCATCCCCCACAGTCTTCCAGCCCTCCGTGAGTGTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCCTACCTCATCCCCCACAGTCTTCCAGCCCTCCGTGAGTGTTTA  50

seq1  CCACAACCTGTGATTAAATCTTCCTAGAATGGTCGGGTTCTACAAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACCTGTGATTAAATCTTCCTAGAATGGTCGGGTTCTACAAATGTC  100

seq1  TCCATTTCCAATTGACCCCATATAAGTGCAAAGCACTTAGCAACCACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCCAATTGACCCCATATAAGTGCAAAGCACTTAGCAACCACTCA  150

seq1  ATAAACTAAAAATAGAAAGGTAAGGCGTGCAGGCTCTATGAGCATGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTAAAAATAGAAAGGTAAGGCGTGCAGGCTCTATGAGCATGAGGG  200

seq1  AGGGGAGCAAGCGAGAAGGCCGGAAGTAAGAACAGGACTAGAATGGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGCAAGCGAGAAGGCCGGAAGTAAGAACAGGACTAGAATGGGGTA  250

seq1  ACCCCTGACGGGAACTAGAACATGGCTGGGTGCCCTGTGCCTGTGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGACGGGAACTAGAACATGGCTGGGTGCCCTGTGCCTGTGTCTTC  300

seq1  CTGGTTCAGAACCTTGACAACTCCAATCTAAAGTCATTTTCCAAACTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCAGAACCTTGACAACTCCAATCTAAAGTCATTTTCCAAACTAGA  350

seq1  CTTTGGTGCAGGGAGATGGTGAATACACAGACCGGAGTCAGAA  393
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGCAGGGAGATGGTGAATACACAGACCGGAGTCAGAA  393

seq1: chr3_130510298_130511450
seq2: B6Ng01-074F04.g_67_1208

seq1  GAATTCCTCGGTTTGTGTTTTCTTTATTGCTTCTGTTTCCATTTTCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGGTTTGTGTTTTCTTTATTGCTTCTGTTTCCATTTTCAGGT  50

seq1  CTTGAACAGTTTTACTCATTTCCTTCACTTGTTTGATTGTATTTTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACAGTTTTACTCATTTCCTTCACTTGTTTGATTGTATTTTTCTGT  100

seq1  ATTTCTTTAAGGGATTTATTCATTTCCTGTCTAAAGGCCTCTATCATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTAAGGGATTTATTCATTTCCTGTCTAAAGGCCTCTATCATCCT  150

seq1  CATAAGGTAAGATTTAAGGTCATTTTCTTGTGCTTTGGCTATGTTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTAAGATTTAAGGTCATTTTCTTGTGCTTTGGCTATGTTGCAGT  200

seq1  ATCCAAGGCTAGTTGGAAAGCTGGGCTTTGGTGATGCCATATTGCCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGGCTAGTTGGAAAGCTGGGCTTTGGTGATGCCATATTGCCCTGG  250

seq1  CTGTTGTTAATTATGTTCTTATGTTGGCCTCTGGGCATCTGGGCTTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTAATTATGTTCTTATGTTGGCCTCTGGGCATCTGGGCTTTGGG  300

seq1  ATTATTATAGGTCGAGGTGCTGATTTCTGAGTTCATCTTTGTTAGATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAGGTCGAGGTGCTGATTTCTGAGTTCATCTTTGTTAGATGAG  350

seq1  TGTTTTAAACATGCTTCTTGCCTTGGTTTTTGTTTTTGTTTTCCCTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAACATGCTTCTTGCCTTGGTTTTTGTTTTTGTTTTCCCTCTGG  400

seq1  TTTTCTGGCCTGAGTAGCCTGGGATTCCGATGAACAGCAAGTCTTCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGCCTGAGTAGCCTGGGATTCCGATGAACAGCAAGTCTTCAGGT  450

seq1  ATAGTGCAATGTTTCCAATGTGTTTTTGTTCTGTTTTGTTTATTTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCAATGTTTCCAATGTGTTTTTGTTCTGTTTTGTTTATTTTTATT  500

seq1  GTATTTTTTGTGGCCAGCATGACCTCTGGGGGTTTGGGTGCTGATGTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTTGTGGCCAGCATGACCTCTGGGGGTTTGGGTGCTGATGTTGC  550

seq1  CTCTGGGGTTCCTAGAACAGGTGTGGCCTCCAGGAAAGCACAGGTCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGTTCCTAGAACAGGTGTGGCCTCCAGGAAAGCACAGGTCTTCT  600

seq1  GCCAATGTTGGTGGCCAGAATATAGGGCCCAAGTGATGGGGTGCAGTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGTTGGTGGCCAGAATATAGGGCCCAAGTGATGGGGTGCAGTTAC  650

seq1  GTCTGTTAGGTGTGCCGTAAGGGGACTTGGCAGACATAGGGAATAAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTAGGTGTGCCGTAAGGGGACTTGGCAGACATAGGGAATAAGGTG  700

seq1  GGGTCTTACCTGGGGTCCCTGGTGCTGATGTGGCCTTTGGGAAAGCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTACCTGGGGTCCCTGGTGCTGATGTGGCCTTTGGGAAAGCAGCA  750

seq1  ACATATAGGGAATTTGAGACCAGCCTGGGGTACACCAGGTGTTACTGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGGGAATTTGAGACCAGCCTGGGGTACACCAGGTGTTACTGACT  800

seq1  AGAAGAGCTAGGATGTAAGACTGGTCTAAGGTGAGGGTAACTCTCTCCTG  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAAGAGCTAGGATGTAAGACTGGTCT-AGGTGAGGGTAACTCTCTCCTG  849

seq1  GAAGTGTGATATCAGAGCAATGGGCTTTATCAAATATCACTGTTCTCATT  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAGTGTGATATCAGAGC-ATGGGCTTTATCAAATATCACTGTTCTCATT  898

seq1  TAATGCTTGGCTCTCTTTCTTCCCTTACAAATCTGTGTATGTGAGCCTCC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAATGCTTGGCTCTCTTTCTTCCCTTACAAATCTGTGTAAGTGAGCCTCC  948

seq1  TGGATGGTATCTCTCAAGGGGCCCTACAAGGCTTCTGCTTCACAGGAGGC  1000
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  TGGATGGTATCTCTCAAGGGGCCCTAC-AGGCTTCTGCTTCCCAGGAGGC  997

seq1  TAAAGCCGCCTCCTTAGAACTCAGGGCTACAGAAGAGCACAGAGGAAGAT  1050
      ||||||||||| | ||||||    |||||||  ||||||| |||  ||||
seq2  TAAAGCCGCCTTCCTAGAACCTTAGGCTACAAGAGAGCACCGAG--AGAT  1045

seq1  GGTAGGTTACCTAGTTACTTC-CTCCATACCAACTGGGTGGAGAAAATGT  1099
       ||| ||||| |||| ||||| ||| ||  ||||| ||||||||||| ||
seq2  -GTAAGTTACTTAGTAACTTCTCTCAAT--CAACTTGGTGGAGAAAA-GT  1091

seq1  CAAAGGGAGAAAAGTGATGCAGTGTGTGTGCCTTTAAAATCACAAATTCA  1149
      | |||||||||||| |||||||   ||| |||||||||   |||||||||
seq2  C-AAGGGAGAAAAGGGATGCAGGTGGTGGGCCTTTAAA--TACAAATTCA  1138

seq1  TGTG  1153
      ||||
seq2  TGTG  1142