BAC Information

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BAC

Clone NameB6Ng01-074I17
Chromosome3 (Build37)
Map Location 76,735,137 - 76,850,713
singlet/doubletdoublet
Overlap geneLOC100041635
Upstream geneGolph4, Fstl5, LOC100041625
Downstream geneDnmt3a-ps1, EG626461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074I17.bB6Ng01-074I17.g
ACCDH891361DH891362
length1,1631,167
definitionDH891361|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I17, 5' end.DH891362|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,849,532 - 76,850,713)(76,735,137 - 76,736,303)
sequence
gaattccagacaattttcataccttcgcaaaagaaatgcttgctttgaat
ttttcttttcttttctttctctctctctttttttaaacttacagttttgt
cttcaagaaaaggctttaatctcctttgtgttctcttgcgcctttggcta
agttctaatacaaagtgcttttaccaccccacagcctctggcctggagca
cagttgcaatgctgatggttgttcttaagaacttgcttttcttcacctct
ggaattctcagccgtcaagcgactgtgctttttcagtgacagatgaggta
ttcatttctgtcctttatttttacttggaaggaaaatgctttatttccca
tttactttaatgtatttctgaaggaggggtttttaggaagtaaaattttc
tggcattctaaaggctccccttgctgtgtgtgattctgggatacttcttt
cagtctttcctcttgtcacccaaactatgcctctgtttgctcacaagctt
ctccatacattttacaggacatcgttcattgtgaaacctacaaattgtag
tgctgagggaaagaatccatttttcaaaaaaataatttctgtcttctcct
cctaacttctataatgctacccaaaggatacaatttatccacttaaaatc
tatccccatcacaagatcaatccattgttgttctattttccttccccaaa
gaacacttcatcttggctgagatccacctcatgcttgtaaactcataaat
taccctgtggaacagataggagagattttccttctgacatcaaacatttg
gatgtgtttgtaatatactatgaagtagtttatacttagaatgccaatcc
tttttcaggaaagtggtgtaattaggaaaaaatcaatggttttcttatac
tcaaggaagaaagacataaagttgtccccagagagacttgtatgttaatt
cttaaccatgtgtgcataaaacacgagagagctcctttattagttcccag
ttagtttgtataagcactacactatatttgtacttcaaatatattgtcgc
taccaaatatttttctgttatattgataaaaatttcacagattattatgg
tcataacatgattatgtcatccccagggaaaaactttcttataatctttc
acgtaacattcct
gaattctttggttaaattacttagtggcaattctgtcacagcggtggtct
gaaatactgtctgggagtgaattgctctaagctcttcacaagctccccaa
aggaaaaacattctttactaaaatttaaagcctctcattaagatctccga
agaaaattattgacaaactgagagactctccagagtaagcaacaaattgt
gttttcttaacatcatgtcgaagccgtggttacacatattgaaacatgtg
catagaggcaataatgaaaacaaaagctgcttctttaggggattaattat
tcctctttgtatcatttttggtcacttaactggttttattatggatattg
tttgatgtgtatgcactcattttgatagtgtttttcaggcaaaagcatgc
aagttggcattctaaccatttgtgattggcacctgctccttcctcaacat
ctataggccctttattttttattttttattgaccctggtaaagtaaaagc
atttgaattgaatggataataatgagatttatatattacacatgtaagct
aattgatagtaatagtgttttactttaatattgtcacagagagcagttta
attgagattatgctatcttcaattttcagagggattatgtaaaaacctat
cttcaaaaagaatgaaatcatctccaaaaggagtgaaatttgtctgtttt
tcacaattgtgtcttagataaaaaatgtcctatagtctctagggtatgat
agcatacaaacaaatgtgtaatatatccttgatattaaaatatactccta
gattcgggagaaatttggagaaaaaaaatgctgtcttggtgagttttata
ccgtgatgggcagactagctaaattcaacagttgcagccatagagaaaca
tctttcagagatgaagcatacaatgtcttcagatatattgtttagagtga
caagtgatctaaaaacataaggtttagtggtttgtattactatactatga
tttaaagtgtacatgcttactgaagtaccagctgtcctggtattgagcca
atataacagaaaattataattgtttgaatataaatcatggatctattttc
ttgatcaaagcaagtatgggaaatctcaggcagtgagaattttaaagctc
ccctacacctttcgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76849532_76850713
seq2: B6Ng01-074I17.b_43_1205 (reverse)

seq1  AGGAA-GTTACGTGAAAGAGTAATAAGATAGTTTTTCTCCTTGTGATGGA  49
      ||||| ||||||||||||| | |||||| |||||||| ||| | ||| ||
seq2  AGGAATGTTACGTGAAAGA-TTATAAGAAAGTTTTTC-CCTGGGGAT-GA  47

seq1  CATAATCATAGTTATGGACCATAAATAATCTGTGAAATTTTTTATCAATT  99
      ||||||||| ||||| |||||| |||||||||||||| |||||||||| |
seq2  CATAATCAT-GTTAT-GACCAT-AATAATCTGTGAAA-TTTTTATCAA-T  92

seq1  ATAAACAGAAAAAATATTATGGTAGCGAACATATATTTGAAGTACAAATA  149
      || ||||| ||||||||| |||||||||  ||||||||||||||||||||
seq2  AT-AACAG-AAAAATATT-TGGTAGCGACAATATATTTGAAGTACAAATA  139

seq1  TTAGTGTAGTGCTTATATCAAAACTTACCTGGGAACTAATAAAGGAGCTC  199
       |||||||||||||||| ||||   || ||||||||||||||||||||||
seq2  -TAGTGTAGTGCTTATA-CAAA--CTAACTGGGAACTAATAAAGGAGCTC  185

seq1  TTCTCCGTGTTTTATTGCACACATGGTTAAGAATTAACATACAAGTTCTC  249
       ||| ||||||||| |||||||||||||||||||||||||||||| ||||
seq2  -TCT-CGTGTTTTA-TGCACACATGGTTAAGAATTAACATACAAG-TCTC  231

seq1  TCTGGGGACAACTTTATGTCTTTCTTCCTTGAGTATAAGAAAACCATTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGACAACTTTATGTCTTTCTTCCTTGAGTATAAGAAAACCATTGA  281

seq1  TTTTTTTCCTAATTACACCACTTTCCTGAAAAAGGATTGGCATTCTAAGT  349
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTTTCCTAATTACACCACTTTCCTGAAAAAGGATTGGCATTCTAAGT  330

seq1  ATAAACTACTTCATAGTATATTACAAACACATCCAAATGTTTGATGTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTACTTCATAGTATATTACAAACACATCCAAATGTTTGATGTCAG  380

seq1  AAGGAAAATCTCTCCTATCTGTTCCACAGGGTAATTTATGAGTTTACAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATCTCTCCTATCTGTTCCACAGGGTAATTTATGAGTTTACAAG  430

seq1  CATGAGGTGGATCTCAGCCAAGATGAAGTGTTCTTTGGGGAAGGAAAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGTGGATCTCAGCCAAGATGAAGTGTTCTTTGGGGAAGGAAAATA  480

seq1  GAACAACAATGGATTGATCTTGTGATGGGGATAGATTTTAAGTGGATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAATGGATTGATCTTGTGATGGGGATAGATTTTAAGTGGATAAA  530

seq1  TTGTATCCTTTGGGTAGCATTATAGAAGTTAGGAGGAGAAGACAGAAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCTTTGGGTAGCATTATAGAAGTTAGGAGGAGAAGACAGAAATT  580

seq1  ATTTTTTTGAAAAATGGATTCTTTCCCTCAGCACTACAATTTGTAGGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTGAAAAATGGATTCTTTCCCTCAGCACTACAATTTGTAGGTTT  630

seq1  CACAATGAACGATGTCCTGTAAAATGTATGGAGAAGCTTGTGAGCAAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAACGATGTCCTGTAAAATGTATGGAGAAGCTTGTGAGCAAACA  680

seq1  GAGGCATAGTTTGGGTGACAAGAGGAAAGACTGAAAGAAGTATCCCAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATAGTTTGGGTGACAAGAGGAAAGACTGAAAGAAGTATCCCAGAA  730

seq1  TCACACACAGCAAGGGGAGCCTTTAGAATGCCAGAAAATTTTACTTCCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACAGCAAGGGGAGCCTTTAGAATGCCAGAAAATTTTACTTCCTA  780

seq1  AAAACCCCTCCTTCAGAAATACATTAAAGTAAATGGGAAATAAAGCATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCCTCCTTCAGAAATACATTAAAGTAAATGGGAAATAAAGCATTT  830

seq1  TCCTTCCAAGTAAAAATAAAGGACAGAAATGAATACCTCATCTGTCACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAAGTAAAAATAAAGGACAGAAATGAATACCTCATCTGTCACTG  880

seq1  AAAAAGCACAGTCGCTTGACGGCTGAGAATTCCAGAGGTGAAGAAAAGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCACAGTCGCTTGACGGCTGAGAATTCCAGAGGTGAAGAAAAGCA  930

seq1  AGTTCTTAAGAACAACCATCAGCATTGCAACTGTGCTCCAGGCCAGAGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAAGAACAACCATCAGCATTGCAACTGTGCTCCAGGCCAGAGGC  980

seq1  TGTGGGGTGGTAAAAGCACTTTGTATTAGAACTTAGCCAAAGGCGCAAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTGGTAAAAGCACTTTGTATTAGAACTTAGCCAAAGGCGCAAGA  1030

seq1  GAACACAAAGGAGATTAAAGCCTTTTCTTGAAGACAAAACTGTAAGTTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAAGGAGATTAAAGCCTTTTCTTGAAGACAAAACTGTAAGTTTA  1080

seq1  AAAAAAGAGAGAGAGAAAGAAAAGAAAAGAAAAATTCAAAGCAAGCATTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAGAGAGAGAAAGAAAAGAAAAGAAAAATTCAAAGCAAGCATTT  1130

seq1  CTTTTGCGAAGGTATGAAAATTGTCTGGAATTC  1182
      |||||||||||||||||||||||||||||||||
seq2  CTTTTGCGAAGGTATGAAAATTGTCTGGAATTC  1163

seq1: chr3_76735137_76736303
seq2: B6Ng01-074I17.g_66_1232

seq1  GAATTCTTTGGTTAAATTACTTAGTGGCAATTCTGTCACAGCGGTGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTTAAATTACTTAGTGGCAATTCTGTCACAGCGGTGGTCT  50

seq1  GAAATACTGTCTGGGAGTGAATTGCTCTAAGCTCTTCACAAGCTCCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACTGTCTGGGAGTGAATTGCTCTAAGCTCTTCACAAGCTCCCCAA  100

seq1  AGGAAAAACATTCTTTACTAAAATTTAAAGCCTCTCATTAAGATCTCCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAACATTCTTTACTAAAATTTAAAGCCTCTCATTAAGATCTCCGA  150

seq1  AGAAAATTATTGACAAACTGAGAGACTCTCCAGAGTAAGCAACAAATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTATTGACAAACTGAGAGACTCTCCAGAGTAAGCAACAAATTGT  200

seq1  GTTTTCTTAACATCATGTCGAAGCCGTGGTTACACATATTGAAACATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTAACATCATGTCGAAGCCGTGGTTACACATATTGAAACATGTG  250

seq1  CATAGAGGCAATAATGAAAACAAAAGCTGCTTCTTTAGGGGATTAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGGCAATAATGAAAACAAAAGCTGCTTCTTTAGGGGATTAATTAT  300

seq1  TCCTCTTTGTATCATTTTTGGTCACTTAACTGGTTTTATTATGGATATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGTATCATTTTTGGTCACTTAACTGGTTTTATTATGGATATTG  350

seq1  TTTGATGTGTATGCACTCATTTTGATAGTGTTTTTCAGGCAAAAGCATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTGTATGCACTCATTTTGATAGTGTTTTTCAGGCAAAAGCATGC  400

seq1  AAGTTGGCATTCTAACCATTTGTGATTGGCACCTGCTCCTTCCTCAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGCATTCTAACCATTTGTGATTGGCACCTGCTCCTTCCTCAACAT  450

seq1  CTATAGGCCCTTTATTTTTTATTTTTTATTGACCCTGGTAAAGTAAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGCCCTTTATTTTTTATTTTTTATTGACCCTGGTAAAGTAAAAGC  500

seq1  ATTTGAATTGAATGGATAATAATGAGATTTATATATTACACATGTAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATTGAATGGATAATAATGAGATTTATATATTACACATGTAAGCT  550

seq1  AATTGATAGTAATAGTGTTTTACTTTAATATTGTCACAGAGAGCAGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATAGTAATAGTGTTTTACTTTAATATTGTCACAGAGAGCAGTTTA  600

seq1  ATTGAGATTATGCTATCTTCAATTTTCAGAGGGATTATGT-AAAACCTAT  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTGAGATTATGCTATCTTCAATTTTCAGAGGGATTATGTAAAAACCTAT  650

seq1  CTTCAAAAAGAATGAAATCATCTCCAAAAGGAGTGAAATTTGTCTGTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAAAGAATGAAATCATCTCCAAAAGGAGTGAAATTTGTCTGTTTT  700

seq1  TCACAATTGTGTCTTAGATAAAAAATGTCCTATAGTCTCTAGGGTATGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTGTGTCTTAGATAAAAAATGTCCTATAGTCTCTAGGGTATGAT  750

seq1  AGCATACAAACAAATGTGTAATATATCCTTGATATTAAAATATACTCCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACAAACAAATGTGTAATATATCCTTGATATTAAAATATACTCCTA  800

seq1  GATTCGGGAGAAATTTGGAGAAAAAAAATGCTGTCTTGGTGAGTTTTATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGGGAGAAATTTGGAGAAAAAAAATGCTGTCTTGGTGAGTTTTATA  850

seq1  CCGTGATGGGCAGACTAGCTAAATTCAACAGTTGCAGCCATAGAGAAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGATGGGCAGACTAGCTAAATTCAACAGTTGCAGCCATAGAGAAACA  900

seq1  TCTTTCAGAGATGAAGCATACAATGTCTTCAGATATATTGTTTAGAGTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGAGATGAAGCATACAATGTCTTCAGATATATTGTTTAGAGTGA  950

seq1  CAAGTGATCTAAAAACATAAGGTTTAGTGGTTTGTATTACTATACTATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATCTAAAAACATAAGGTTTAGTGGTTTGTATTACTATACTATGA  1000

seq1  TTTTAAAGTGTACATGCTTACTTGAAGTA-CAGCTGTCCTTGTATTTGAG  1048
       |||||||||||||||||||| ||||||| |||||||||| ||| |||||
seq2  -TTTAAAGTGTACATGCTTAC-TGAAGTACCAGCTGTCCTGGTA-TTGAG  1047

seq1  CCAATAT-ACAGAAAA-TATAATTGTTGAAATAT-AATCATGAATCATTT  1095
      ||||||| |||||||| ||||||||||  ||||| ||||||| |||  ||
seq2  CCAATATAACAGAAAATTATAATTGTTTGAATATAAATCATGGATCTATT  1097

seq1  GTCTTGATCAAAAGCAAGTATGGAAAATCTCAGTCATGTAGGATATTTTA  1145
       |||||||| ||||||||||||| ||||||||| || ||  || ||||||
seq2  TTCTTGATC-AAAGCAAGTATGGGAAATCTCAGGCA-GTGAGA-ATTTTA  1144

seq1  AAGCTCTCCTACA-CTTTCGAAA  1167
      |||||| |||||| |||||||||
seq2  AAGCTCCCCTACACCTTTCGAAA  1167