BAC Information

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BAC

Clone NameB6Ng01-074P09
Chromosome3 (Build37)
Map Location 41,059,251 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074P09.bB6Ng01-074P09.g
ACCDH891666DH891667
length4991,234
definitionDH891666|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P09, 5' end.DH891667|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatattttaatggggttatttgatt
ttctggagtccaccttcttgagttctttctatatattggatattagtccc
atatctgatttaggataggtaaagatcctttcccaatatgttggtggtct
ttttgtcttattgatggtgtctattgccttgcagaagctttgcagtttta
tgaggtcccatttgtcaattctcaatcttacagcacaagccattagaagc
cattgctgttctgttcaggaatttttcctctgtgcccatatcttcgaggc
ttttccccactttctcctctataagtttcactgtctctggttttatatgg
agttccttgatccacttagatttgaccttagtacaaggagatagcagtgg
atcgattcgcattcttctacatgataactgccagttgtgccagcatttgt
tgaaaatgctgtctttttttccactgggatggtttttagctctcttgtc
gaattccataaaaacataaaactggaaactagaatatatatacaaagaac
gtataaggttttaaaaaatgacatgacacataatatgagtcaaaaaatat
gccacccttagagaaaactaatttttcatttgtaattggttatcaattgt
agattgcctctaggttagggatggggacgtgtgttcaattttcctggtac
tggcactcacctgggtcggacctgcgcaggtcctgtgtagatacctcagt
ctctgtgagttcatgtgtgcatcaatcctgtttatttagaggactttgtt
tccttatcatcatcaatcacccagagctcttaacaccttccccttgaatc
ttgaggggagggatttgatggaggcatcccttttaggttcagggttccaa
ggtctctttctctctgcacattatctagctgtggttgtctgtatttgttc
tcatctgatgcaggaaatcacttctctggtgatggctgagcaaggctcag
atctgactatagcagaatgtcattaggaatcattttattgctatgtttct
ttggcagaacagtagtatttggtttacctaaatccctgttctatctaata
tcaggttcttggaaacacaagcagtgtcaggtataggttccctcttttag
aactggctcaactcaaaccagatctttattggttactcccacaggctgtg
tgccgcagtaatcacaatatgtccttcaagcaagtaatcattgtagatcg
aaggctttgtaggtgggttggtgtttataattttcatttagtaccatgaa
gaatacctttccagtactctgaacattaattagaccatagttatatgtag
gcagcagcttgacttctctgtatttagtgagttctatagatgttgtcttc
agcataagaccataccagaagtttgtgaaaaacagccaatatccttggga
gtagcctatgttgtttgctgatcccaatgggaccctttgtcaacaattca
attatatgtaattcattcccagtcaggaagttcattgggtataagaaaat
attcagcttttgcctctgttcttcatgaatatttgctatttcatgaagat
tgccttccgaattcatatatttgtaaaggtttacatatataagttctata
tgaccctcgaaagctccgactgacctgctccagtacccgtagttctagac
tattgaacacttggtacatgagatgagtatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059251_41059737
seq2: B6Ng01-074P09.b_43_540 (reverse)

seq1  GACAAGGGAGCT-AAAACCAT-CCAGTGG-AAAAAAGACAGCATTTTCAA  47
      |||||| ||||| |||||||| ||||||| ||||||||||||||||||||
seq2  GACAAGAGAGCTAAAAACCATCCCAGTGGAAAAAAAGACAGCATTTTCAA  50

seq1  CAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTG  97
      ||||   |||||||||||||||  |||||||||||||||||||||||| |
seq2  CAAA---TGCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATCG  97

seq1  ATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAA  147
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAA  147

seq1  CGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAA  197
      | ||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCCATATAAAACCAGAGACAGTGAAACTTATAGAGGAGAAAGTGGGGAA  197

seq1  AAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGC--  245
      |||||| |||||||||| ||||| ||||||||||||| | ||||||||  
seq2  AAGCCTCGAAGATATGGGCACAGAGGAAAAATTCCTGAACAGAACAGCAA  247

seq1  --------AATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCT  287
              ||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGCTTCTAATGGCTTGTGCTGTAAGATTGAGAATTGACAAATGGGACCT  297

seq1  CATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAA  337
      ||| ||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  CATAAAACTGCAAAGCTTCTGCAAGGCAATAGACACCATCAATAAGACAA  347

seq1  AAAG-GCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  386
      ||||  |||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAGACCACCAACATATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  397

seq1  AGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAG  436
      | |||||||||||||||||||||  ||||||||||||||||||| |||||
seq2  ATGGGACTAATATCCAATATATAGAAAGAACTCAAGAAGGTGGACTCCAG  447

seq1  AAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAAT  486
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAATCAAATAACCCCATTAAAATATGGGGCTCAGAGCTAAACAAAGAAT  497

seq1  T  487
      |
seq2  T  498