BAC Information

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BAC

Clone NameB6Ng01-075E12
Chromosome3 (Build37)
Map Location 64,477,938 - 64,478,940
singlet/doubletsinglet
Overlap genenone
Upstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918
Downstream gene4933425M15Rik, LOC670110, Kcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075E12.bB6Ng01-075E12.g
ACCDH891881DH891882
length1,004447
definitionDH891881|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E12, 5' end.DH891882|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgcctctgttctcttagacacctttcattcctgtgtatgtac
accacatatgcacataaatttaaaaaaatttattggtgccatgcaaacct
ggaagaatcttagcatcttgacataaaaggtaatctgtcaaattctttct
atttcatttccaaatgaacaaattgctagaaactaccatagcatactccc
attgacatcctaggatgttggtctatctattcctatgcacctgcaaattt
cactaagtttttaggtctcagaccagaactggccagggacatactgcttc
tacaccttaaactatacttctgtttccaattagggctgtattcatatgat
tagggtactaaatatttcaagatatttctgttaggaaaagataattccaa
aggcactttcatttatttaaaaaaaatcaagttccacattacatttatta
taataattatcatttgttctaaaactccatttataaggagtcatatagtt
tgtcacaagtaggttatatttatagagaaaagaagacaggatcaatagcc
ttgtttgatatttcctttcagctttctaggacatgtggtctgtgttaaac
atctaatgccaccatgtggcaagaaattgccatagatgtggaaattagta
aaaatgtccatatttcaatgaaaatacttgaaagaacaaactttgggaca
tttatgactactggctgtaatattctactgagtgataaagagtaatcatt
tcttttttttttttactttttttaattttttaggtattttgttcatttac
attccaatgctatcccaaagtccaccataccctccccccccccaactcct
ctacacacccactcccattttcttggccctggtgttccctgtacctaagc
ctataaaagttttcaagaaccatgggcctctctttcaatgatggccgaat
aggccaccttctgctacaatatgcagctaaaacccaactttgtgggggta
ctgg
acggtttatgcacacaaatgagtaattggcctctttcttctactggctat
tctttaaatttaagtactgcttggttttatttgaaaggaccagtattcag
cacaagacacccaagacctagttctcaagcacagggagatttatttgtcc
catagggacaaagggtagggaataagagacaatggcaggagacagaggat
agggaaagggaggagggaaaggaggcaggagaggaggggtatatttatcc
cagagggacaaaggattgtctcaagaaagagaggaggcagatgtggccca
tgggaaaatgcaggttattaaaggtaaaaggggaagcccatattaggatg
aattggttttattggatatgttaattagagtacccaaaagggagcttttg
gttattggacttcaatactttaatagctggatcttagtagccagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64477938_64478940
seq2: B6Ng01-075E12.b_39_1042

seq1  GAATTCAATGCCTCTGTTCTCTTAGACACC-TACATTCCTGTGTATGTAC  49
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  GAATTCAATGCCTCTGTTCTCTTAGACACCTTTCATTCCTGTGTATGTAC  50

seq1  ACCACATATGCACATAAATTTAAAAAAATTTATTGGTGCCATGCAAACCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATATGCACATAAATTTAAAAAAATTTATTGGTGCCATGCAAACCT  100

seq1  GGAAGAATCTTAGCATCTTGACATAAAAGGTAATCTGTCAAATTCTTTCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATCTTAGCATCTTGACATAAAAGGTAATCTGTCAAATTCTTTCT  150

seq1  ATTTCATTTCCAAATGAACAAATTGCTAGAAACTACCATAGCATACTCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTCCAAATGAACAAATTGCTAGAAACTACCATAGCATACTCCC  200

seq1  ATTGACATCCTAGGATGTTGGTCTATCTATTCCTATGCACCTGCAAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACATCCTAGGATGTTGGTCTATCTATTCCTATGCACCTGCAAATTT  250

seq1  CACTAAGTTTTTAGGTCTCAGACCAGAACTGGCCAGGGACATACTGCTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGTTTTTAGGTCTCAGACCAGAACTGGCCAGGGACATACTGCTTC  300

seq1  TACACCTTAAACTATACTTCTGTTTCCAATTAGGGCTGTATTCATATGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTTAAACTATACTTCTGTTTCCAATTAGGGCTGTATTCATATGAT  350

seq1  TAGGGTACTAAATATTTCAAGATATTTCTGTTAGGAAAAGATAATTCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTACTAAATATTTCAAGATATTTCTGTTAGGAAAAGATAATTCCAA  400

seq1  AGGCACTTTCATTTATTTAAAAAAAATCAAGTTCCACATTACATTTATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTTTCATTTATTTAAAAAAAATCAAGTTCCACATTACATTTATTA  450

seq1  TAATAATTATCATTTGTTCTAAAACTCCATTTATAAGGAGTCATATAGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTATCATTTGTTCTAAAACTCCATTTATAAGGAGTCATATAGTT  500

seq1  TGTCACAAGTAGGTTATATTTATAGAGAAAAGAAGACAGGATCAATAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAAGTAGGTTATATTTATAGAGAAAAGAAGACAGGATCAATAGCC  550

seq1  TTGTTTGATATTTCCTTTCAGCTTTCTAGGACATGTGGTCTGTGTTAAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGATATTTCCTTTCAGCTTTCTAGGACATGTGGTCTGTGTTAAAC  600

seq1  ATCTAATGCCACCATGTGGCAAGAAATTGCCATAGATGTGGAAATTAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGCCACCATGTGGCAAGAAATTGCCATAGATGTGGAAATTAGTA  650

seq1  AAAATGTCCATATTTCAATGAAAATACTTGAAAGAACAAACTTTGGGACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCCATATTTCAATGAAAATACTTGAAAGAACAAACTTTGGGACA  700

seq1  TTTATGACTACTGGCTGTAATATTCTACTGAGTGATAAAGAGTAATCATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACTACTGGCTGTAATATTCTACTGAGTGATAAAGAGTAATCATT  750

seq1  TCTTTTTTTTTTTTAC-TTTTTTAATTTTTTAGGTATTTTGTTCATTTAC  798
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTACTTTTTTTAATTTTTTAGGTATTTTGTTCATTTAC  800

seq1  ATTTCCAATGCTATCCCAAAGTCCACCATACCCTCCCCCCCCCCAACTCC  848
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTCCAATGCTATCCCAAAGTCCACCATACCCTCCCCCCCCCCAACTCC  849

seq1  TCTACACACCCACTCCCA-TTTCTTGGCCCTGGTGTTCCCCTGTACTGAA  897
      |||||||||||||||||| |||||||||||||||||| ||||||||  ||
seq2  TCTACACACCCACTCCCATTTTCTTGGCCCTGGTGTT-CCCTGTACCTAA  898

seq1  GCATAT-AAAGTTTGCAAGACCAGTGGGCCTCTCTTTCCAATGATGGCCG  946
      || ||| ||||||| ||||| |  ||||||||||||| ||||||||||||
seq2  GCCTATAAAAGTTTTCAAGAACCATGGGCCTCTCTTT-CAATGATGGCCG  947

seq1  AATAGGCCATCTTCTGCTAC-ATATGCAGCTAGAGACACGAGCTCTG-GG  994
      ||||||||| |||||||||| ||||||||||| | || | | || || ||
seq2  AATAGGCCACCTTCTGCTACAATATGCAGCTA-AAAC-CCAACTTTGTGG  995

seq1  GGGTACTGG  1003
      |||||||||
seq2  GGGTACTGG  1004