BAC Information

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BAC

Clone NameB6Ng01-075E23
Chromosome3 (Build37)
Map Location 111,725,865 - 111,726,943
singlet/doubletsinglet
Overlap geneLOC625585
Upstream geneLOC100043190, LOC668712
Downstream geneEG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075E23.bB6Ng01-075E23.g
ACCDH891903DH891904
length1,0981,074
definitionDH891903|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E23, 5' end.DH891904|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatagtgaatggttgagaagtacctgaaaaaaat
gttcaacacccttaatcataaggaaaatgtaaatcaaaacaactctgaga
ttccacctcataccagtgagaatggctaagatcaaaaaatcaggtgatag
cagatgctggcaaggatgtggtgaaagcgtaacggtcctccattgctggt
gggattgcaagctggtacaaccattcaggaaatcagtctggtgattcctc
agaatattggacaaagtactactggaggatccagcaatacctctcctggg
catatatccagaagatgttccaacttgtaataaggacacatgctccacta
tgttcaaagcagccttattcatgatagccaaatctggaaagaacccagat
gtcccttcagagaggaatagatacagaaaatgtggtacatttgcacagct
ttaattaaaaataagaatttatgaaattcttaggcaaatggatggatctg
gaggattatcatcctgagtgaggtaacccaattacaacagaactcacatg
actggcagttgtggtacatgcttttaatcccagcacttgggaggcagagg
cagatggatttctgagtttgaggccagcctggtctatctacagaaagagt
tccaggacatccagggctacacaaagagatcctgtctccacaatggaaga
gaggtattacacctggaaagaactaagatgatatgagctcactgataagt
agatatttgctcataaagttagaatacccaagataaaatttccaaaacac
atcaaactcaagaagaagggagaccaaactttggatacgtcattccttct
tgggaacaaaatacctatgcagggagttacagagacaaagtttggagctg
agacagaaggaaagaccatccagagactgctccaaacaggatccatccca
taaacagccaccaaacccagacattatgcacatgcagcagatttgcagaa
ggactctgataagctgtctctgtgagctatgcatgctgaaatacagaagt
gatgctacagtcattttagaatggaacacagccccaatgaaggaccta
gaattcccttctgcactgtatataaattcagtgctttccggactcgttat
tgcatgccagtagtggcttgtgatctgagtccatactcgacataataata
aaacgggctcgtttgcaaatttcaacagacatcaaaattcttggcctcat
ctgggtttcccacagactcagggcatggcaacatcacctctgttgaccaa
gtataactctttgcttctatatggcacacaaacttagagatccagacaat
cacaaataaaaatgcaaataattaccatctacaaatagagaaactccata
tgatatatatatctgagtctggattgtgttgtttaaaataattgtatcaa
atgatatgtttcattcatttcaataaaacaacctaattttattctgtttc
attactgaataaagctcagttgtttgttcttatacttaactgtcgttgtc
cattatcctgttgatgagtattgaagctggttttaaataaaacaaatgtg
gaaatgtctagatgtataccagatgaacataaaaacgaaaaaaaaattaa
atacaattaataataaacatgattctcattactattgtgaagccaagagg
caactgcagtcaaataaaaacaatgaaaacaatatctcattaacaaaaag
tacatggccatcagctaaggcatgtgttttcctaatgttatttaggagaa
gtcaagttttatggataaaaatcacaataaggaattgtggcaagttgatt
gttatacttgattttgctaatttatattatatttacttatatggatataa
tgttgaaaagtgaacagtagcctggtaagaactatggtgactggcaagaa
atcctctgaggaatccatttctctattggcatcagtatctctacaaggaa
gttaatgggtaattgaatcagttgtttcacattctcttccatcaggcctg
tttaaaatgtgcagaaattttatgtcccatcatcagtgcagagattctct
ttgggaaacattagataaaataaaaccaataacaaccaacaagaaagaaa
aaaagagttgctgtgagcaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111725865_111726943
seq2: B6Ng01-075E23.g_65_1138

seq1  GAATTCCCTTCTGCACTGTATATAAATTCAGTGCTTTCCGGACTCGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCTGCACTGTATATAAATTCAGTGCTTTCCGGACTCGTTAT  50

seq1  TGCATGCCAGTAGTGGCTTGTGATCTGAGTCCATACTCGACATAATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCAGTAGTGGCTTGTGATCTGAGTCCATACTCGACATAATAATA  100

seq1  AAACGGGCTCGTTTGCAAATTTCAACAGACATCAAAATTCTTGGCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGGCTCGTTTGCAAATTTCAACAGACATCAAAATTCTTGGCCTCAT  150

seq1  CTGGGTTTCCCACAGACTCAGGGCATGGCAACATCACCTCTGTTGACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTCCCACAGACTCAGGGCATGGCAACATCACCTCTGTTGACCAA  200

seq1  GTATAACTCTTTGCTTCTATATGGCACACAAACTTAGAGATCCAGACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACTCTTTGCTTCTATATGGCACACAAACTTAGAGATCCAGACAAT  250

seq1  CACAAATAAAAATGCAAATAATTACCATCTACAAATAGAGAAACTCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATAAAAATGCAAATAATTACCATCTACAAATAGAGAAACTCCATA  300

seq1  TGATATATATATCTGAGTCTGGATTGTGTTGTTTAAAATAATTGTATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATATATCTGAGTCTGGATTGTGTTGTTTAAAATAATTGTATCAA  350

seq1  ATGATATGTTTCATTCATTTCAATAAAACAACCTAATTTTATTCTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATGTTTCATTCATTTCAATAAAACAACCTAATTTTATTCTGTTTC  400

seq1  ATTACTGAATAAAGCTCAGTTGTTTGTTCTTATACTTAACTGTCGTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGAATAAAGCTCAGTTGTTTGTTCTTATACTTAACTGTCGTTGTC  450

seq1  CATTATCCTGTTGATGAGTATTGAAGCTGGTTTTAAATAAAACAAATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCCTGTTGATGAGTATTGAAGCTGGTTTTAAATAAAACAAATGTG  500

seq1  GAAATGTCTAGATGTATACCAGATGAACATAAAAACGAAAAAAAAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCTAGATGTATACCAGATGAACATAAAAACGAAAAAAAAATTAA  550

seq1  ATACAATTAATAATAAACATGATTCTCATTACTATTGTGAAGCCAAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTAATAATAAACATGATTCTCATTACTATTGTGAAGCCAAGAGG  600

seq1  CAACTGCAGTCAAATAAAAACAATGAAAACAATATCTCATTAACAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCAGTCAAATAAAAACAATGAAAACAATATCTCATTAACAAAAAG  650

seq1  TACATGGCCATCAGCTAAGGCATGTGTTTTCCTAATGTTATTTAGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGCCATCAGCTAAGGCATGTGTTTTCCTAATGTTATTTAGGAGAA  700

seq1  GTCAAGTTTTATGGATAAAAATCACAATAAGGAATTGTGGCAAGTTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTTTATGGATAAAAATCACAATAAGGAATTGTGGCAAGTTGATT  750

seq1  GTTATACTTGATTTTGCTAATTTATATTATATTTACTTATATGGATATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACTTGATTTTGCTAATTTATATTATATTTACTTATATGGATATAA  800

seq1  TGTTGAAAAGTGAACAGTAGCCTGGTAAGAACTATGGTGACTGGCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAAGTGAACAGTAGCCTGGTAAGAACTATGGTGACTGGCAAGAA  850

seq1  ATCCTCTGAGGAATCCATTTCTCTATTGGCATCAGTATCTCTACAAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGAGGAATCCATTTCTCTATTGGCATCAGTATCTCTACAAGGAA  900

seq1  GTTAATGGGTAATTGAATCAGTTGTTTCACATTCTCTTCCATCAGGCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGGGTAATTGAATCAGTTGTTTCACATTCTCTTCCATCAGGCCTG  950

seq1  TTTAAAATGTGCAGAAATTTAATGTCCCATCATCAGTGCAGGAGATTCTC  1000
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  TTTAAAATGTGCAGAAATTTTATGTCCCATCATCAGTGCA-GAGATTCTC  999

seq1  TTT-GGAAACATTAGATAAAAATAAAAACCAATAACAAAACAAACAAAGA  1049
      ||| |||||||||||||||||   ||||||||||||  ||| ||| ||||
seq2  TTTGGGAAACATTAGATAAAA--TAAAACCAATAAC--AACCAAC-AAGA  1044

seq1  AAGAAAAAAGAAGTAGCTGTGAGCAGAGCA  1079
      |||||||||  ||| |||||||||| ||||
seq2  AAGAAAAAAAGAGTTGCTGTGAGCAAAGCA  1074