BAC Information

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BAC

Clone NameB6Ng01-075K17
Chromosome3 (Build37)
Map Location 19,669,504 - 19,670,646
singlet/doubletsinglet
Overlap genenone
Upstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002
Downstream geneLOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965, LOC100040283, Cpb1, Agtr1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075K17.bB6Ng01-075K17.g
ACCDH892164DH892165
length1,1441,215
definitionDH892164|Mus musculus domesticus DNA, BAC clone: B6Ng01-075K17, 5' end.DH892165|Mus musculus domesticus DNA, BAC clone: B6Ng01-075K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatgtaaatacagtagagtattacttaggtagaaactcgtggt
gattttaaaagattggaaaataatctgaagaagagttgaataatgtgcat
tctaaagactagaacattttattgtatgttgtaaaattaggtaaaaactt
gtgtttgtgaaaactgagcattaaaacttcacagagaccaattctcattt
tctttaaaaaaaaaaaaaagttgtcttctatcacctctgattagttaata
aaagagctaatcaatcaattacttgggtagaacagaatagagtgggactt
ttaatcccaatgcaggggttagggggaacaaagagaggaaaagaggagta
gtagggagaccataggtaggaaacaggatgattccccatgaagtctttat
aagagaacagacctgagaacacatatggacccgagtaagctagggcaagg
ccagatggcaaataacggaacaccttgctgaataggatgttgcctagttg
ggttagaaaagatcagaaactgctctgctattactgcttacagtttgctc
atacaaatactaagtcactgtgtatttgggacctaaaatgtactggagtc
gaggggagaaacacccgataattatttgggagcaaaaggggcataagaaa
aactcccccagaattatatttacacggtcccattttgataaagagatgaa
gttgtttcttctgtctggagcatgtcaattcccagatgttgttccatggc
tcagtccctccagtcagtccagtgaagtgtcactttctctaaggagcttt
acgttagcaaccaatctaaaaatgtatcctaaacatagttttcctcactt
gatctttatagcatctatcactgtgtaaaggcatgtgttaatattttcct
ctcaaaaatataaactcaattgagtcgattctctcaaagactagaagcat
gctcatactgacagcaatttaataaatggtcaaatagcacaatatcatgc
ataagacatacagatttagtcaaatgaatcatttccccttaaacctgctg
gatttcaacataagtttgtatcatgagtcaattgtttggagaaactaaat
atgttgatgattatagatgatctaatgtttccttgaaaatactc
gaattcatggggtcattcctattcaaaccactacaggaattttggattag
aaaatcagttgaattatttaagtgggccttaatgggccatccttgtagga
tcatggaaaacagtggtgctgacagtaatttgaattgtgagggcctggat
caagaggtttcagaggtaaaaactctgttagtatgtggcctagaaaccat
tcttgtgatattttggtgaagaatgaggctttttgcccttgtctgaaaag
tctgcctgaggctaaagtcaagagttttggattacttctgttggcagaag
aaatctgaaaacagactattatagactccatcatgtggttattaattctc
cttcttatgaagatctataatgaaaaggagcaagctgaacaggaaaaaat
agaaaatttacaatttgaggagaaaagacacaccaggaaatacaatatag
ttaaatcttgtgttcaaggagaaaaacagattaaagaaatacataatgtt
aagtggattaaaggaagtggtgacctcagggcaagatcccacccagctaa
gcttccaacttgtgaaaggggactaaagaaaagcctgagccaggcatggt
ggtatacatctttaatgccagcactccaagggatctctgagttcaaagcc
tgccttggactacagagtgagtttcaggacatccaagcttaggcagtgaa
ggaaactatcaaaaccagaaaacaggtggagatacaatacaacaaggggg
ccacattccagtcccagcaaagagtaaaatttggcagctttgggtgcttg
gttttggcttagagttgatatagtgtctgcctatatccaacacaactcaa
acaccaggtcaatacagaaaaccaaaatttattgtaatcaagccatttat
taatccatcatggatgcagaacagattcaggagctgacatgcaactctga
accaaaatgttacagagctttgagactgaaacacaaacactgtcacttgt
cttagcactaccatttgatgtctgacttcattttactaagccgacaactc
cctctttaagcagcagtacttccaagaacatactgttacagtctcttcta
gaaaaacatagtaacccatacacaatgctatttccagggacgtagaacaa
attgaattgagttgtttggcgaatcactctccggtccaaattctactcag
tggattgataaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_19669504_19670646
seq2: B6Ng01-075K17.b_42_1185

seq1  GAATTCAAATGTAAATACAGTAGAGTATTACTTAGGTAGAAACTCGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTAAATACAGTAGAGTATTACTTAGGTAGAAACTCGTGGT  50

seq1  GATTTTAAAAGATTGGAAAATAATCTGAAGAAGAGTTGAATAATGTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAAAGATTGGAAAATAATCTGAAGAAGAGTTGAATAATGTGCAT  100

seq1  TCTAAAGACTAGAACATTTTATTGTATGTTGTAAAATTAGGTAAAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGACTAGAACATTTTATTGTATGTTGTAAAATTAGGTAAAAACTT  150

seq1  GTGTTTGTGAAAACTGAGCATTAAAACTTCACAGAGACCAATTCTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTGAAAACTGAGCATTAAAACTTCACAGAGACCAATTCTCATTT  200

seq1  TCTTTAAAAAAAAAAAAAAGTTGTCTTCTATCACCTCTGATTAGTTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAAAAAAAAAAAGTTGTCTTCTATCACCTCTGATTAGTTAATA  250

seq1  AAAGAGCTAATCAATCAATTACTTGGGTAGAACAGAATAGAGTGGGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTAATCAATCAATTACTTGGGTAGAACAGAATAGAGTGGGACTT  300

seq1  TTAATCCCAATGCAGGGGTTAGGGGGAACAAAGAGAGGAAAAGAGGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCAATGCAGGGGTTAGGGGGAACAAAGAGAGGAAAAGAGGAGTA  350

seq1  GTAGGGAGACCATAGGTAGGAAACAGGATGATTCCCCATGAAGTCTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAGACCATAGGTAGGAAACAGGATGATTCCCCATGAAGTCTTTAT  400

seq1  AAGAGAACAGACCTGAGAACACATATGGACCCGAGTAAGCTAGGGCAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACAGACCTGAGAACACATATGGACCCGAGTAAGCTAGGGCAAGG  450

seq1  CCAGATGGCAAATAACGGAACACCTTGCTGAATAGGATGTTGCCTAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGGCAAATAACGGAACACCTTGCTGAATAGGATGTTGCCTAGTTG  500

seq1  GGTTAGAAAAGATCAGAAACTGCTCTGCTATTACTGCTTACAGTTTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGAAAAGATCAGAAACTGCTCTGCTATTACTGCTTACAGTTTGCTC  550

seq1  ATACAAATACTAAGTCACTGTGTATTTGGGACCTAAAATGTACTGGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATACTAAGTCACTGTGTATTTGGGACCTAAAATGTACTGGAGTC  600

seq1  GAGGGGAGAAACACCCGATAATTATTTGGGAGCAAAAGGGGCATAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGAAACACCCGATAATTATTTGGGAGCAAAAGGGGCATAAGAAA  650

seq1  AACTCCCCCAGAATTATATTTACACGGTCCCATTTTGATAAAGAGATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCCAGAATTATATTTACACGGTCCCATTTTGATAAAGAGATGAA  700

seq1  GTTGTTTCTTCTGTCTGGAGCATGTCAATTCCCAGATGTTGTTCCATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTCTTCTGTCTGGAGCATGTCAATTCCCAGATGTTGTTCCATGGC  750

seq1  TCAGTCCCTCCAGTCAGTCCAGTGAAGTGTCACTTTCTCTAAGGAGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCTCCAGTCAGTCCAGTGAAGTGTCACTTTCTCTAAGGAGCTTT  800

seq1  ACGTTAGCAACCAATCTAAAAATGTATCCTAAACATAGTTTTCCTCACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTAGCAACCAATCTAAAAATGTATCCTAAACATAGTTTTCCTCACTT  850

seq1  GATCTTTATAGCATCTATCACTGTGT-AAGGCATGTGTTAATATTTTCCT  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GATCTTTATAGCATCTATCACTGTGTAAAGGCATGTGTTAATATTTTCCT  900

seq1  CTCAAAAATATAAACTCAATTGAGTCGATTCTCTCAAAGACTAGAAGCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAATATAAACTCAATTGAGTCGATTCTCTCAAAGACTAGAAGCAT  950

seq1  GCTCATACTGACAGCAATTTAATAAATGGTCAAATAGCACAATATCAATG  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCTCATACTGACAGCAATTTAATAAATGGTCAAATAGCACAATATC-ATG  999

seq1  CATAAGACATACAGATGTAGTCAAATGAATCATTTCCCCTTAAACCTGCT  1049
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CATAAGACATACAGATTTAGTCAAATGAATCATTTCCCCTTAAACCTGCT  1049

seq1  GGATTTCAACATAAGTTTGTATCATGAGTTCAATTGTTTGGAGAAACTTA  1099
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  GGATTTCAACATAAGTTTGTATCATGAG-TCAATTGTTTGGAGAAACTAA  1098

seq1  ATATGTTGATGATTATAGATGATCTAAATGTT--CTTG-AAATACTC  1143
      ||||||||||||||||||||||||| ||||||  |||| ||||||||
seq2  ATATGTTGATGATTATAGATGATCT-AATGTTTCCTTGAAAATACTC  1144