BAC Information

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BAC

Clone NameB6Ng01-076G14
Chromosome3 (Build37)
Map Location 41,057,634 - 41,058,185
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076G14.bB6Ng01-076G14.g
ACCDH892685DH892686
length1,006734
definitionDH892685|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G14, 5' end.DH892686|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgattgagttacctcactaatgatgatatcctccagata
tatccatttgtccaagaatttcataagttcattgtttttaaaagctgagt
agtactccattgtgtaaatgtacaactttttctgtatccattcctctgtt
gagggacatctgggttctttccagctctggttattataaatgaggctgct
atgaacataggggagcatatgttcatatcaccagttggaacatcttctgg
gtatatgcccaggagaggtattgctggatcttccggtagtactatgtcca
acttactgaggaaacaccagactgacttccagagtggttgtaccagttta
caatcccaccagcaatggagaagtgttcctctttctccacatccttacca
gcatctgctgtcacctgagtttttgttcttagccattctgaatggtgtga
ggtggaatctcagggttgttttaatttgcatttccctgatgattaaggat
gttgaacattttttcaggtgtttctcagccatttggaattcctcagttga
gaactctttgtttagctctgtaccccatttttaatggggttatttgaatt
tctggagtccagcttcttcagctctttgtacatattggatattggtcctc
tatcagattttaggattggtaaaaaatcctttcccaatctgttggtggcc
tttttgtcttattgacaatgtcttttgccttacagaagctttgcaatttt
atgaggtcccatttgtcaattcttggtcttacaggacaagccattgctgt
tcattttaggaatttttcccctgtgcccatatctttgagaattttcccca
ctttctcctctactaatttcagtgtctctggttttatatggaggtctttt
gatccaattagagttgagctttgtacaaggagataagaattgcatcaatt
cgaattcttctacatgataaaccaccagtgtgccaccaccatttggtgga
aatgct
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttt
tcatatgctttctccgagtctaacgagattatcatgtggttttgtctttg
attatgtttatataatggattacgttgatggatttctgtatattaaacca
tccctgcatccctagaataaaacctacttggtcaggatggatgattgttt
tcatgtgttcttggattcatatagcgagaatttattgagtatttttgcat
caatattcataagggaaattggtctgaagttctctatctctgttggatct
ttctgtggtttagttatcagagtaattgtggctccatagaatgagttggg
tagagtaccttctacttctattttgtggaatagtttgtgcagaactggaa
ttagatcttctttgaaggtctggtagaactctctctccactaaacccatc
tggtcctgggctttttttggctgggagactattaatgactgcttctattt
ctttaggggatgtgggactgtgtatattgttaacttgaccctggtttaac
tttggtacgtggtatctgtctagaaatttgtttcattttgtccaggtttt
ccagttttgtttgagtatagcctttttgtagaaggatctgatggtgtttt
ggatttcttcaggatctattgttctgtctcccttttccttttttgatttt
gtttattaagatgctgttccctgtgccctctagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41057634_41058185
seq2: B6Ng01-076G14.g_244_803 (reverse)

seq1  ACTAGAGGGCACAGGG-ACAGCATCCTAACTAACAAAATC-AGAAATGAA  48
      |||||||||||||||| |||||||| |||  ||||||||| | ||| |||
seq2  ACTAGAGGGCACAGGGAACAGCATCTTAATAAACAAAATCAAAAAAGGAA  50

seq1  AAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATC  98
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  AAGGGAGACAGAACAATAGATCCTGAAGAAATCCAAAACACCATCAGATC  100

seq1  CTACTAC-AAAAGGCTATACTC-AACAAAACTGGAAAACCTGGACGAAAT  146
      || |||| |||||||||||||| |||||||||||||||||||||| ||||
seq2  CTTCTACAAAAAGGCTATACTCAAACAAAACTGGAAAACCTGGACAAAAT  150

seq1  G-GACAAATTTCTAGACAGATACCAGGTACCAAAGTTAAATCAGGATCAA  195
      |  |||||||||||||||||||||| |||||||||||||| |||| ||||
seq2  GAAACAAATTTCTAGACAGATACCACGTACCAAAGTTAAACCAGGGTCAA  200

seq1  GTTAACGATTTAAACAGTCGCATATCCCCTAAAGAAACAGAAGAAGTCAT  245
      |||||| || || |||||| || |||||||||||||| ||||| ||||||
seq2  GTTAACAATATACACAGTCCCACATCCCCTAAAGAAATAGAAGCAGTCAT  250

seq1  TAATAGTCTCCCAGCCAAAACAAACCCAGGACCAGATGGTTTTAGTG---  292
      |||||||||||||||||||| || ||||||||||||||| |||||||   
seq2  TAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGGAG  300

seq1  -CAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAA  341
        ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTCTACCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAA  350

seq1  ATTATTCCACAAAATAGAAGTAGAAGGTACTCTACCTAACTCATTCTATG  391
      | |||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTATTCCACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTCTATG  400

seq1  AAGCCACAATTACTCTGATACCTAAACCACAGAAAGATGCAACAAAGATA  441
       ||||||||||||||||||| ||||||||||||||||| ||||| |||||
seq2  GAGCCACAATTACTCTGATAACTAAACCACAGAAAGATCCAACAGAGATA  450

seq1  GAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATACTCAA  491
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAGAACTTCAGACCAATTTCCCTTATGAATATTGATGCAAAAATACTCAA  500

seq1  TAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAACCATCCATC  541
      | ||||||||||||   |||||||||||||||| ||| ||| ||||||||
seq2  T-AAATTCTCGCTATATGAATCCAAGAACACATGAAAACAATCATCCATC  549

seq1  CTGACCAAGTA  552
      |||||||||||
seq2  CTGACCAAGTA  560