BAC Information

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BAC

Clone NameB6Ng01-076I02
Chromosome3 (Build37)
Map Location 70,364,981 - 70,365,999
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik, Gm414, LOC100041384, LOC625868
Downstream geneLOC670542, EG625901, EG667377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076I02.bB6Ng01-076I02.g
ACCDH892754DH892755
length3011,031
definitionDH892754|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I02, 5' end.DH892755|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agcttttagaaataaggacaccctgagttttgcagacaaatagatggaac
tacaaaatatcatcccagtgaggtaacacagaccagaaaggtcttgcatg
gtatgtactcactaataagcagatattagaaaaaaaaaaaaagaatagaa
tacccaagatacagtccacagaactcaaaaaaggtcaacaagctgaaggg
atcaagtgaggatgcctcagtcctacctgggtggtagaagaaagcaatca
caagtcgggtgggaggaatctaggagggaaagtggattgtgggggagggg
a

gaattctctgctatttcttagggaagcaggcctagtttgctcataatgtt
attagaataattggtagttcttctaaatatttaaatcacccagtattaaa
agtaggtgtagtctcctgaggctgaaaatctgttgtgatatccaagaaaa
acgttttatgatttgctgtgcctacaagtgtgcatgaacatatatacaaa
attttacattttcagagactgcagaaagcataattacagactataatcat
gtccccccaatcccttatactataaaaattcaagcattgcacttattgat
tctgaatgcacatattccaagcctatatccaaccacaaactgttactgtt
aaaaataaaatggaaaacctcacaatttattgaaatagattctgaccaag
cattattaatgatttatcaatgcaaataatgaatatagtgatcaagcata
ggaatagtttacacagaaagtcatgagaaaaaggcatgtaaaatcatttc
tgtttacatttctatcaccatcctaaatatggtcaaagatagactttgca
gagaaggtggcttggggattttcttagtggatgagaaaaatctggccagg
taaagaaaagggtcattacagacagagggaaaaagtaagaggcccagtga
cccccggtgaactgggcacttgctgcagggggatactgatgcagttaagt
aagaaaagtgggcagagagctggccgtgaaggaaaggggcacctatatga
ggacctgctgtattgtgaagttcctggcatgccttttgtgcattttacaa
tgcttcataagattctctgtgtaggaaaaccatcctgaaacaggtgtggg
aaacagtgttaggactggaagaaggacaagtgtttgtcaggagaaagata
ttgaacagactctgtggtttaaagcaggtgcattccattgccaacctgta
acatacagaagatggaaatcctcacaggactagagcagtgaccaaatgca
gttatgttaatcagaaacttattacattgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_70364981_70365999
seq2: B6Ng01-076I02.g_70_1087 (reverse)

seq1  GTTTCTGGATAAACATCAACTGCATTTTGGTCACTGCTTCTTAGTCCTGT  50
      |||||| ||| ||||| ||||||| |||||||||||||   |||||||||
seq2  GTTTCT-GATTAACAT-AACTGCA-TTTGGTCACTGCT--CTAGTCCTGT  45

seq1  GAGGATTTCCATCTTCTGTATTGTTACAGGTTGGCAATGGAATGCACCTG  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGGATTTCCATCTTCTGTA-TGTTACAGGTTGGCAATGGAATGCACCTG  94

seq1  CTTTAAACCACAGAGTCTGTTTCAATATCTTTCTCCTGACAAACACTTGT  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTTAAACCACAGAGTCTG-TTCAATATCTTTCTCCTGACAAACACTTGT  143

seq1  CCTTCTTCCAGTCCTAACACTGTTT-CCACACCTGTTTCAGGATGGTTTT  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTTCTTCCAGTCCTAACACTGTTTCCCACACCTGTTTCAGGATGGTTTT  193

seq1  CCTACACAGAGAATC-TATGAAGCATTGTAAAATGCAC-AAAGGCATGCC  247
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  CCTACACAGAGAATCTTATGAAGCATTGTAAAATGCACAAAAGGCATGCC  243

seq1  AGGAACTTCACAATACAGCAGGTCCTCATATAGGTGCCCCTTTCCTTCAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTCACAATACAGCAGGTCCTCATATAGGTGCCCCTTTCCTTCAC  293

seq1  GGCCAGCTCTCTGCCCAC-TTTCTTACTTAACTGCATCAGTAT-CCCCTG  345
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  GGCCAGCTCTCTGCCCACTTTTCTTACTTAACTGCATCAGTATCCCCCTG  343

seq1  CAGCAAGTGCCCAGTTCACCGGGGGTCACTGGGCCTCTTACTTTTT-CCT  394
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGCAAGTGCCCAGTTCACCGGGGGTCACTGGGCCTCTTACTTTTTCCCT  393

seq1  CTGTCTGTAATGACCCTTTTCTTTACCTGGCCAGATTTTTCTCATCCACT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTAATGACCCTTTTCTTTACCTGGCCAGATTTTTCTCATCCACT  443

seq1  AAGAAAATCCCCAAGCCACCTTCTCTGCAAAGTCTATCTTTGACCATATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCCCCAAGCCACCTTCTCTGCAAAGTCTATCTTTGACCATATT  493

seq1  TAGGATGGTGATAGAAATGTAAACAGAAATGATTTTACATGCCTTTTTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGGTGATAGAAATGTAAACAGAAATGATTTTACATGCCTTTTTCT  543

seq1  CATGACTTTCTGTGTAAACTATTCCTATGCTTGATCACTATATTCATTAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTTCTGTGTAAACTATTCCTATGCTTGATCACTATATTCATTAT  593

seq1  TTGCATTGATAAATCATTAATAATGCTTGGTCAGAATCTATTTCAATAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTGATAAATCATTAATAATGCTTGGTCAGAATCTATTTCAATAAA  643

seq1  TTGTGAGGTTTTCCATTTTATTTTTAACAGTAACAGTTTGTGGTTGGATA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGGTTTTCCATTTTATTTTTAACAGTAACAGTTTGTGGTTGGATA  693

seq1  TAGGCTTGGAATATGTGCATTCAGAATCAATAAGTGCAATGCTTGAATTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTGGAATATGTGCATTCAGAATCAATAAGTGCAATGCTTGAATTT  743

seq1  TTATAGTATAAGGGATTGGGGGGACATGATTATAGTCTGTAATTATGCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTATAAGGGATTGGGGGGACATGATTATAGTCTGTAATTATGCTT  793

seq1  TCTGCAGTCTCTGAAAATGTAAAATTTTGTATATATGTTCATGCACACTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGTCTCTGAAAATGTAAAATTTTGTATATATGTTCATGCACACTT  843

seq1  GTAGGCACAGCAAATCATAAAACGTTTTTCTTGGATATCACAACAGATTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCACAGCAAATCATAAAACGTTTTTCTTGGATATCACAACAGATTT  893

seq1  TCAGCCTCAGGAGACTACACCTACTTTTAATACTGGGTGATTTAAATATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCAGGAGACTACACCTACTTTTAATACTGGGTGATTTAAATATT  943

seq1  TAGAAGAACTACCAATTATTCTAATAACATTATGAGCAAACTAGGCCTGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAACTACCAATTATTCTAATAACATTATGAGCAAACTAGGCCTGC  993

seq1  TTCCCTAAGAAATAGCAGAGAATTC  1019
      |||||||||||||||||||||||||
seq2  TTCCCTAAGAAATAGCAGAGAATTC  1018


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