BAC Information

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BAC

Clone NameB6Ng01-076M07
Chromosome3 (Build37)
Map Location 113,520,033 - 113,521,086
singlet/doubletsinglet
Overlap genenone
Upstream geneUtp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3
Downstream geneCol11a1, LOC100043220
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076M07.bB6Ng01-076M07.g
ACCDH892938DH892939
length1,0451,245
definitionDH892938|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M07, 5' end.DH892939|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattactttattgtaatttcctacttatattttgatgtagtttt
ggtaatttacttgaatgctccaggcataatttagcacagagcatagtatg
ggtccaacattcagtcacatcaatgcagagtttttaagactctcttagtg
aaaaactattcctgatttatataaaatttaaaagttaatacatctatggt
atctttgagatttgccaagctataaatcaacttaatatggtgatgcatac
aaatgatattactaacctagaaaatatgtatctatatatacacacaacct
attcccagtatttctcaatcttcagttgtgtcacactaaattattctgct
taaattagggagaaaaggaacagaaacactcattttctattacaagttct
agtattaagaatgttatggtgaataaaaacataatgttcttttttcttta
aattttttattttatacatttatgcctgactattcctaacattttatccc
ttccctttgcctccaacaattccatccatgctcctcccagactctgcaaa
ttcagctttctttaattatgtctctttctctctcgtacatacacacacac
acacactcacacacacacacacacacacacacacaaccttcttaatctat
gtagtattgttttacatgcatgtatgttgaggataactatgtatgtatca
cccatcatggggtcctcctagaaaagacatattctccttctatcaggagt
tattaatgacctttacaatttcacttaacagctggcccttgtgaaatttt
tccatccaacactgacatgttaacttgtgtagtcaattttcagtttgtgg
gtttttttcaacaatcacattgtgaaattttatagtggtagcttctctgt
tacatatagagtcactatcttatatacagcatgtaagactactactgaaa
tcccaactgaaatcaccaatagccaaataccaaagacctgcaaatgttga
aaggtacacatgcatgtcagcaaagaccagtggagggtatgcaag
gaattccaaataaaacaagtgacactgaaacttatagaggagaaagtagg
gaaaagcctggaagatatgggtacaggggaaatattcctgaatagaacag
caatggcttgtgctgtaagatcaagaatcgataaatgggatctcataaaa
ttgcaaagcttctgcaaagcaaaggacaccgtcaacaatggaatagaatt
gacccagaaatgaacccacacacctatggtcacttgatctttgacaaggg
agctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgct
tctaggtcttgctccttcgcctgcttgctgcgtgagactgagtaactgct
agatccttggatttccattcacagctgcgactgaacaattgttgggaatt
gggctgccgactgtaagtcatcaataaattcctttactatctagaaacta
tccataagttctgtgactctagagaaccctgactaatacagaagttgata
actggttgttatcatgtagaagaattcgaattgatccattcctatctcct
tgtactaaggtcaaatctaagtggatcaaggaacttcacataaaacaaga
gacactgaaacttatagaggagaaagtggggaaaagccttgaagatatgg
gcacagggaaaaattcctgaatagaacagcaatagcttgtgctgtaagat
cgagaattgacaaaagggacctcatgaaactccaaagcttctgcatgaca
aaggacaccgtcaataagacaaaaagaccaccaacagattgggaaaggat
ctttacctatcctaaatcagataggggactaatatcccacatatataaag
aactcaagaagtggacttcagaaaatcaaataacccattaaaaaactggg
gctcagaactgaacaagattctcacccgaggattaccgaatggcagagaa
gcacatgaaaaattgtcaacatcctttatcatcaggaaatgcaatttaaa
acaccctgagattccacctcaccagtcagaatgctagatcaaaaattcga
cagcagaatgcttggcaagatgtatagaaagggaacctccctccattggt
gtgttgatgcaagctgtaccaacacctgaaatacagtctggtggttcccg
aaatggacatatacatccgaagaatccgatctcctggccatattccagag
atagtcccactgtgaagaagagaacaaagtgtcgcacatgatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_113520033_113521086
seq2: B6Ng01-076M07.b_46_1090 (reverse)

seq1  CTTGCATACCCT-CACTGGTCTTTGCTGACAATGCATTGGTGTACCTTTC  49
      |||||||||||| ||||||||||||||||| ||||||  |||||||||||
seq2  CTTGCATACCCTCCACTGGTCTTTGCTGAC-ATGCAT--GTGTACCTTTC  47

seq1  AACATTTTGCAGGTCTTTGATAATCTTGGCTATTTGTGATTTCAGTTGTG  99
      |||| |||||||||||||| ||   ||||||||| ||||||||||||| |
seq2  AACA-TTTGCAGGTCTTTGGTA--TTTGGCTATTGGTGATTTCAGTTG-G  93

seq1  TATTTCTGTAGTAGTCTCTACATGCTGTATATAAGATAGTGACTTCTATA  149
       ||||| |||||||||| ||||||||||||||||||||||||| ||||||
seq2  GATTTCAGTAGTAGTCT-TACATGCTGTATATAAGATAGTGAC-TCTATA  141

seq1  TGTAACAGAGAAGCTACACCTATAAAATTTCAACAATGTGATTGTTGAAA  199
      |||||||||||||||||  |||||||||||| ||||||||||||||| ||
seq2  TGTAACAGAGAAGCTACCACTATAAAATTTC-ACAATGTGATTGTTG-AA  189

seq1  AAAAAACCACAAACTGAAAATTGACTACACAAGTTAACATGTCAGTGTTG  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCACAAACTGAAAATTGACTACACAAGTTAACATGTCAGTGTTG  239

seq1  GATGGAAAAATTTCACAAGGGCCAGCTGTTAAGTGAAATTGTTAAGGTCA  299
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATGGAAAAATTTCACAAGGGCCAGCTGTTAAGTGAAATTGTAAAGGTCA  289

seq1  TTAATAACTCCTGATAGAAGGAGAATATGTCTTTTCTAGGAGGACCCCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACTCCTGATAGAAGGAGAATATGTCTTTTCTAGGAGGACCCCAT  339

seq1  GATGGGTGATACATACATAGTTATCCTCAACATACATGCATGTAAAACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGATACATACATAGTTATCCTCAACATACATGCATGTAAAACAA  389

seq1  TACTACATAGATTAAGAAGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACATAGATTAAGAAGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGA  439

seq1  GTGTGTGTGTGTGTGTATGTACGAGAGAGAAAGAGACATAATTAAAG-AA  498
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTGTGTGTGTGTGTGTATGTACGAGAGAGAAAGAGACATAATTAAAGAAA  489

seq1  GCTGAATTTGCAGAGTCTGGGAGGAGCATGGATGGAATTGTTGGAGGCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATTTGCAGAGTCTGGGAGGAGCATGGATGGAATTGTTGGAGGCAA  539

seq1  AGGGAAGGGATAAAATGTTAGGAATAGTCAGGCATAAATGTATAAAATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGGGATAAAATGTTAGGAATAGTCAGGCATAAATGTATAAAATAA  589

seq1  AAAATTTAAAGAAAAAAGAACATTATGTTTTTATTCACCATAACATTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAAGAAAAAAGAACATTATGTTTTTATTCACCATAACATTCTT  639

seq1  AATACTAGAACTTGTAATAGAAAATGAGTGTTTCTGTTCCTTTTCTCCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAGAACTTGTAATAGAAAATGAGTGTTTCTGTTCCTTTTCTCCCT  689

seq1  AATTTAAGCAGAATAATTTAGTGTGACACAACTGAAGATTGAGAAATACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGCAGAATAATTTAGTGTGACACAACTGAAGATTGAGAAATACT  739

seq1  GGGAATAGGTTGTGTGTATATATAGATACATATTTTCTAGGTTAGTAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATAGGTTGTGTGTATATATAGATACATATTTTCTAGGTTAGTAATA  789

seq1  TCATTTGTATGCATCACCATATTAAGTTGATTTATAGCTTGGCAAATCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTATGCATCACCATATTAAGTTGATTTATAGCTTGGCAAATCTC  839

seq1  AAAGATACCATAGATGTATTAACTTTTAAATTTTATATAAATCAGGAATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACCATAGATGTATTAACTTTTAAATTTTATATAAATCAGGAATA  889

seq1  GTTTTTCACTAAGAGAGTCTTAAAAACTCTGCATTGATGTGACTGAATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCACTAAGAGAGTCTTAAAAACTCTGCATTGATGTGACTGAATGT  939

seq1  TGGACCCATACTATGCTCTGTGCTAAATTATGCCTGGAGCATTCAAGTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCATACTATGCTCTGTGCTAAATTATGCCTGGAGCATTCAAGTAA  989

seq1  ATTACCAAAACTACATCAAAATATAAGTAAGAAATTACAATAAAGTAATA  1048
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTACCAAAACTACATCAAAATATAAGTAGGAAATTACAATAAAGTAATA  1039

seq1  GAATTC  1054
      ||||||
seq2  GAATTC  1045