BAC Information

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BAC

Clone NameB6Ng01-077E02
Chromosome3 (Build37)
Map Location 38,673,144 - 38,674,263
singlet/doubletsinglet
Overlap genenone
Upstream gene4930556A17Rik, LOC665811, EG665821, LOC100041366, LOC100040785, LOC665838, Ankrd50, LOC100041378, LOC665855, LOC100040824
Downstream geneFat4, LOC100041432, LOC100040853, LOC100041443
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077E02.bB6Ng01-077E02.g
ACCDH893281DH893282
length1,1351,102
definitionDH893281|Mus musculus domesticus DNA, BAC clone: B6Ng01-077E02, 5' end.DH893282|Mus musculus domesticus DNA, BAC clone: B6Ng01-077E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgcctcaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaattcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccacataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctagagaaagtagccatgagctaaaggatctgcaccctatag
tgacacatatgagctaccagtacccgagctctgactctagctgcatatat
atcaaagatgctagtagcatcactgaagagagccatgactgcaactttat
atgccagtacaggaacccagcaaaggatgggtggc
gaattcacatctaactgaccctgtgagattcatacagcaactaaaaaagg
caatgtatcaaggaggatgaatagtgctgccagtgcacccagctattaat
tgctaaaccatgttttaatcctgtctttaagctctgtcctggactcagag
gagcagggagtgatgctgttaacaagagccagtggatgtgggtcctgcct
ctgtgcgggttaggatgaccgcatccattactagggctttgggtggatgg
tgtcacagtagaagtgaggtaattttgttatttgtgctgttctttgaggg
tctgaagtcatgctcgctctctagtgatgcttcttcctgacaaggttttc
ccaaggctacatttttccccggtgaaaatgaaatcaaacgcatataagtg
tatctatatcactccaaggttaaatgtcctgtaacacagtcttgattttt
ttccataaaaatcataaacagttcatggatacgaccatgaagagctgaga
caatcattgagtattttgtcttagacttcagctttgtatgggcaagattt
cttgtttctgtgacaaaattcctatcagaagtatcttaaaaggggaacag
agttgtgtgggctctgtttgaagggatacagtccatcgcaggaggaagct
atggtggtgaggggtacaagatgactcatcacactgagtccacaatcagg
aatcaagaagggaacaatggcttcaacttgctctgtctttttcattgggt
ctcgcttcccaagactttgggatggtgccacccatattcaatgtgacact
ttcttactccagtttctctggaaaaacctttatagatacacgcaatggtg
tgtcctgagtgattacaaagttagtcactttaacaatgagacaacacaca
ctctgcacacatgagctgcttagggatgtggaatgtcattggttttcagg
tcttttctaggtttaagaggtagttgtctatctgcagttttcaaacttgt
accattcactttacatgagagtaaactgaatactattcttcagattgata
tggacatggtcactggtcatgacttcagattgcagaatgtctttccaaat
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_38673144_38674263
seq2: B6Ng01-077E02.g_68_1169 (reverse)

seq1  ATATTT-GAAAGACATTCTGCAATCTGAAGTCCATGACCAGTGACCATGT  49
      |||||| |||||||||||||||||||||||| ||||||||||||||||| 
seq2  ATATTTGGAAAGACATTCTGCAATCTGAAGT-CATGACCAGTGACCATG-  48

seq1  TCCATGTCAATCTGAAGGATATGTATTCAGGTTTTACTTCTTCATGTTAA  99
      ||||| ||||||||||| ||| ||||||||  ||||||   ||||| |||
seq2  TCCATATCAATCTGAAGAATA-GTATTCAG--TTTACT--CTCATG-TAA  92

seq1  AGTGAATGGGTACAAGGTTTGAAAAACTGCAGATTAGACAACCTTACCTC  149
      ||||||| ||||||| ||||| ||||||||||| ||||||||  ||||||
seq2  AGTGAAT-GGTACAA-GTTTG-AAAACTGCAGA-TAGACAAC--TACCTC  136

seq1  TTAAAACCTTAAGAAAAGACCCTGAAAACCAATGGACATTCCACATCCCT  199
      || ||||||  |||||||| ||||||||||||| ||||||||||||||||
seq2  TT-AAACCT--AGAAAAGA-CCTGAAAACCAAT-GACATTCCACATCCCT  181

seq1  AAAGCAGCTCATGTGTGCAGAGTGTGTGTTGTCTCATTGTTAAAGTGACT  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAGCAGCTCATGTGTGCAGAGTGTGTGTTGTCTCATTGTTAAAGTGACT  230

seq1  AACTTTGTAATCACTCAGGACACACCATTGCGTGTATCTAT-AAGGTTTT  298
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACTTTGTAATCACTCAGGACACACCATTGCGTGTATCTATAAAGGTTTT  280

seq1  TCCAGAGAAACTGGAGTAAGAAAGTGTCACATTGAATATGGGTGGCACCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAAACTGGAGTAAGAAAGTGTCACATTGAATATGGGTGGCACCA  330

seq1  TCCCAAAGTCTTGGGAAGCGAGACCCAATGAAAAAGACAGAGCAAGTTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGTCTTGGGAAGCGAGACCCAATGAAAAAGACAGAGCAAGTTGA  380

seq1  AGCCATTGTTCCCTTCTTGATTCCTGATTGTGGACTCAGTGTGATGAGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGTTCCCTTCTTGATTCCTGATTGTGGACTCAGTGTGATGAGTC  430

seq1  ATCTTGTACCCCTCACCACCATAGCTTCCTCCTGCGATGGACTGTATCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTACCCCTCACCACCATAGCTTCCTCCTGCGATGGACTGTATCCC  480

seq1  TTCAAACAGAGCCCACACAACTCTGTTCCCCTTTTAAGATACTTCTGATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAGAGCCCACACAACTCTGTTCCCCTTTTAAGATACTTCTGATA  530

seq1  GGAATTTTGTCACAGAAACAAGAAATCTTGCCCATACAAAGCTGAAGTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTGTCACAGAAACAAGAAATCTTGCCCATACAAAGCTGAAGTCT  580

seq1  AAGACAAAATACTCAATGATTGTCTCAGCTCTTCATGGTCGTATCCATGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAATACTCAATGATTGTCTCAGCTCTTCATGGTCGTATCCATGA  630

seq1  ACTGTTTATGATTTTTATGGAAAAAAATCAAGACTGTGTTACAGGACATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTATGATTTTTATGGAAAAAAATCAAGACTGTGTTACAGGACATT  680

seq1  TAACCTTGGAGTGATATAGATACACTTATATGCGTTTGATTTCATTTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGGAGTGATATAGATACACTTATATGCGTTTGATTTCATTTTCA  730

seq1  CCGGGGAAAAATGTAGCCTTGGGAAAACCTTGTCAGGAAGAAGCATCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGAAAAATGTAGCCTTGGGAAAACCTTGTCAGGAAGAAGCATCACT  780

seq1  AGAGAGCGAGCATGACTTCAGACCCTCAAAGAACAGCACAAATAACAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCGAGCATGACTTCAGACCCTCAAAGAACAGCACAAATAACAAAA  830

seq1  TTACCTCACTTCTACTGTGACACCATCCACCCAAAGCCCTAGTAATGGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCACTTCTACTGTGACACCATCCACCCAAAGCCCTAGTAATGGAT  880

seq1  GCGGTCATCCTAACCCGCACAGAGGCAGGACCCACATCCACTGGCTCTTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCATCCTAACCCGCACAGAGGCAGGACCCACATCCACTGGCTCTTG  930

seq1  TTAACAGCATCACTCCCTGCTCCTCTGAGTCCAGGACAGAGCTTAAAGAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCATCACTCCCTGCTCCTCTGAGTCCAGGACAGAGCTTAAAGAC  980

seq1  AGGATTAAAACATGGTTTAGCAATTAATAGCTGGGTGCACTGGCAGCACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAAACATGGTTTAGCAATTAATAGCTGGGTGCACTGGCAGCACT  1030

seq1  ATTCATCCTCCTTGATACATTGCCTTTTTTAGTTGCTGTATGAATCTCAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCTCCTTGATACATTGCCTTTTTTAGTTGCTGTATGAATCTCAC  1080

seq1  AGGGTCAGTTAGATGTGAATTC  1120
      ||||||||||||||||||||||
seq2  AGGGTCAGTTAGATGTGAATTC  1102