BAC Information

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BAC

Clone NameB6Ng01-077P21
Chromosome3 (Build37)
Map Location 120,061,616 - 120,062,733
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077P21.g
ACCDH893818
length1,097
definitionDH893818|Mus musculus domesticus DNA, BAC clone: B6Ng01-077P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacattcactgatgcaagacatgcctagttagtgcaggcaaagg
cagatcagtaggtacagtgcttactttataatcaatggacagaaatttga
tatccaacacccgcaataaaaccaaggttgtggaggaaccgacttcgagg
ttgtaatccaaacgctggatagatggaaacgggaagataatggaacttga
tggccagctagtctatttggcttgttagttccaggacaataagagactgt
ttcaaataaaggtgggtggcatatgaggaatgccatctgaaattgtctgc
tggctgctattcataatgcacacatgtgcatatgaacaggcctttgtgca
cctgcatacacattagcaaatgcatgtggacgtaccccaaacaaataaat
atcaattaccatttgtgcaaagcaacttgcttctattttcgctacaactc
taagatctgggtttgctaatacgtctccctttccataaagctataaaaag
gaaaagaaacttgttttaagtaaacaataaggcaggccggctagctatgg
tttgcagagagactacttgcagctttattgccaagagcactgcaagagtc
atggggacgttttggagataatggttaaattcacagactcagagacatct
caccgtggaagagacctgggaggtcatctaattcaaatacttcattttat
agatgaggagacaaaagcctagggaggtttggtagctaactgattgcaga
atctattctcagacccagtatttccatctcaacctcaaaggttatgttcc
tcaaaatccccgtggtaaaaacaaattacctcggagaacccttctgacct
tctgtgggaaatagagttcgggaaagtaagacagcgagtgaatctgagaa
aaattatcatgtggattatgttcactaacataaacaatgcaggggttcta
gacacaccggtgttgacaaattgactgaggttcatacacatttctatgca
ctctatagattcattatttcaattctctagctctctatgcacaactttaa
aaaaaaaaaaacactgtcatttgtctcctttgcaatatggctgcaac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120061616_120062733
seq2: B6Ng01-077P21.g_67_1163 (reverse)

seq1  GTTGCAGCTCATATTTGCAAAAGTGAAGACAAATGACAAGTTGTTTTTTT  50
      |||||||| |||| |||||||   | ||||||||||||    || |||||
seq2  GTTGCAGC-CATA-TTGCAAA---GGAGACAAATGACA----GTGTTTTT  41

seq1  TTTTTTTTAAAG-TGTGCCATAGGAGAAGCTAGAGAATTGGAAATAATGA  99
      |||||||||||| |||| |||| ||| |||||||||||| ||||||||||
seq2  TTTTTTTTAAAGTTGTG-CATA-GAG-AGCTAGAGAATT-GAAATAATGA  87

seq1  ATTCTATAGAGTGCATAAGAAATGTTGTATTGGACCCTTCAGTTCAAATT  149
      | |||||||||||||| ||||||| |||||  || || |||| ||||  |
seq2  A-TCTATAGAGTGCAT-AGAAATG-TGTAT--GAACC-TCAG-TCAA--T  128

seq1  TGGTCAACACCGGTGTGTCTAGAACCCCTGCATTGTTTTATGTTAGTGAA  199
      | ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGTCAACACCGGTGTGTCTAGAACCCCTGCATTG-TTTATGTTAGTGAA  177

seq1  CATAATCCACATGATAATTTTTCTCAGATTCACTCGCTGTCTTAC-TTCC  248
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATAATCCACATGATAATTTTTCTCAGATTCACTCGCTGTCTTACTTTCC  227

seq1  CGAACTCTATTTCCCACAGAAGGTCAGAA-GGTTCTCCGAGGTAATTTGT  297
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGAACTCTATTTCCCACAGAAGGTCAGAAGGGTTCTCCGAGGTAATTTGT  277

seq1  TTTTACCACGGGGATTTTGAGGAACATAACCTTTGAGGTTGAGATGGAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCACGGGGATTTTGAGGAACATAACCTTTGAGGTTGAGATGGAAA  327

seq1  TACTGGGTCTGAGAATAGATTCTGCAATCAGTTAGCTACCAAACCTCCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGTCTGAGAATAGATTCTGCAATCAGTTAGCTACCAAACCTCCCT  377

seq1  AGGCTTTTGTCTCCTCATCTATAAAATGAAGTATTTGAATTAGATGACCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGTCTCCTCATCTATAAAATGAAGTATTTGAATTAGATGACCT  427

seq1  CCCAGGTCTCTTCCACGGTGAGATGTCTCTGAGTCTGTGAATTTAACCAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTCTCTTCCACGGTGAGATGTCTCTGAGTCTGTGAATTTAACCAT  477

seq1  TATCTCCAAAACGTCCTTGTGACTCTTGCAGTGCTCTTGGCAATAAAGCT  547
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  TATCTCCAAAACGTCCCCATGACTCTTGCAGTGCTCTTGGCAATAAAGCT  527

seq1  GAAAGTAGTCTCTCTGCAAACCATAGCTAGCCGGCCTGCCTTATTGTTTA  597
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTAGTCTCTCTGCAAACCATAGCTAGCCGGCCTGCCTTATTGTTTA  577

seq1  CTTAAAACAAGTTTCTTTTCCTTTTTATAGCTTTATGGAAAGGGAGATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTAAAACAAGTTTCTTTTCCTTTTTATAGCTTTATGGAAAGGGAGACGT  627

seq1  ATTAGCAAACCCAGATCTTAGAGCTGTAGCGAAAATAGAAGCAAGTTGCT  697
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTAGCAAACCCAGATCTTAGAGTTGTAGCGAAAATAGAAGCAAGTTGCT  677

seq1  TTGCACAAATGGTAATTGATATTTATTTGTTTGGGGTATGTACACATGAA  747
      |||||||||||||||||||||||||||||||||||||| || |||||| |
seq2  TTGCACAAATGGTAATTGATATTTATTTGTTTGGGGTACGTCCACATGCA  727

seq1  TATGCTAATGTGTATGCAGGTGCACAAAGGGCAGTGCATATGCACATGTG  797
      | |||||||||||||||||||||||||||| | || ||||||||||||||
seq2  TTTGCTAATGTGTATGCAGGTGCACAAAGGCCTGTTCATATGCACATGTG  777

seq1  TGCATTATGAATAGCAGCCAGAAGACAATCTCAGATGGCATTCCTCATAT  847
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  TGCATTATGAATAGCAGCCAGCAGACAATTTCAGATGGCATTCCTCATAT  827

seq1  GCCACCCACCTTTATTTGAAACAGTCTCTTATTGTCCTGGAACTAACTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCCACCCACCTTTATTTGAAACAGTCTCTTATTGTCCTGGAACTAAC-AA  876

seq1  GCCAAATAGACTAGCTGGCCATCAAGTTCCACTATCTTCCTGTTTCCATC  947
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  GCCAAATAGACTAGCTGGCCATCAAGTTCCATTATCTTCCCGTTTCCATC  926

seq1  TATCCAGTGTTTGGATTACAACCACGAAGTCTGTTCCTCCACAACCTTGG  997
      ||||||| ||||||||||||||| ||||||| ||||||||||||||||||
seq2  TATCCAGCGTTTGGATTACAACCTCGAAGTCGGTTCCTCCACAACCTTGG  976

seq1  TTTTATTGTGGGTCTTGGATATCAAATTTCTGTCCTCTGATTATAAAGTA  1047
      |||||||| |||| |||||||||||||||||||||  |||||||||||||
seq2  TTTTATTGCGGGTGTTGGATATCAAATTTCTGTCCATTGATTATAAAGTA  1026

seq1  AGCACTGTACCTACTGATCTGCCTTTGCCTGCACTAACTAGGTATGTCTT  1097
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCACTGTACCTACTGATCTGCCTTTGCCTGCACTAACTAGGCATGTCTT  1076

seq1  GCTTCAGTGAATGTAGAATTC  1118
      || ||||||||||||||||||
seq2  GCATCAGTGAATGTAGAATTC  1097