BAC Information

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BAC

Clone NameB6Ng01-078G03
Chromosome3 (Build37)
Map Location 50,632,772 - 50,633,710
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
Downstream geneCcrn4l, Elf2, A630062H14, 4930583H14Rik, LOC669130, Ndufc1, Narg1, Rab33b, Setd7, LOC100039684, Mgst2, Maml3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078G03.bB6Ng01-078G03.g
ACCDH894096DH894097
length1,0381,150
definitionDH894096|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G03, 5' end.DH894097|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgtttgtggtttgaatgagaatggccccccataggctaatag
attttgtgcaatacttggtcaccagagagtgacattatttaaaaggatga
agaaatttggtcttgctggaggaagtgtgccactgggggtgggcataaag
gtttcaaaaagtccattccaagcccagagtctctgtcttcctgatggctt
tgaattcaggtatagaactcattctcccagccatgatgacaatagcctaa
acttctgaaacttaaagacagccccaattaaatgcttttttttataagag
ttgtcatggtcatggtgtctcttcacagtaatgtaacactgactaagacc
atggagcatgcttataatcccagagcttaggatgagaagacagaacctca
gaagttcatggttgtccttggctggactacaagacacccagaaggtctac
agagatggctcagtggataagaggaggtcgtgttctggctgagggcccaa
attcagttcttatcatcctcttcagtcagcttgcacccacctggaactcc
acttcaagggcccctctggcctctgcagctgtctttactcctgtaaacag
atcatcacacaggcagatacagaaatacgcacacactcacgtgcacatgc
acacatacacacacacacacacacacacacacagaggggaaagggagagg
agaaaactacaagtaaaataaatcttaaaacaattattaacaaaacctag
gatacccaagatataagatacaatttgctaaacacatgaaactcaagaaa
aaatgaagactgaagtatggacactatgcccctccttagaagtgggaaca
aaacaccccatggaaggagttacagagacaaagtttggagctgagacgaa
aggatggaccatgtagagactgccatatccagggatccaccccataacca
gcttctaaacgctgacaccattgcatatactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgctagc
gaattcattcactaccttcaaggctggccttcagggtcctactttggcta
gctagactctacgttctaagagtttcacaacctcctcaaagaaccactag
gtgggaaccaaatcttccaacgcacaggaaaacatttctgactcaaaccg
tagcaaagactggtcagtcagcacctttgacacttcatctgtttgagaac
tctggcttgtgcctggaacgtcacactaatgctgtacctgtggttcatgt
ccatgactgtagatgtaaagagaaatggcagtagagatgagaatggaaat
tcccaggctggggctggaaagatggctttgtgggtaagagtgcttgctgt
acaagcgtgaggacctgagtgtgaatctcagcattcacgtgaaaacctgg
gtacagctacacacacacagaaccccagcactttgggtgtgtgtgtgcag
acagaagcatcctggagcttgctaactatcagcctagctccaggctcaga
gattgtggtctcatgggaataaggtagagagtgacagtagggcatttagc
atcctcctctggcctctgcaggtgcataggacacacactacacatattct
acatatttgctggaggccagctccagacctctggttctttcttgaagata
gcagaagggaaagagcattggtggagacaagacttgttcttgtgagagat
tagggatgctttcataataacatatacccatcttgactttaagttactat
gaggccagatgctgcacgcctctggacctacaacacatgtctctaacagc
acatacagggaggcaggtaaaggatttatttgtttcactcccttctctgg
ccaagcagcctgaagtcctttactgacttggctggtttactctgtaagcc
agaaaagaaagaagtcgctcacacagaaaacacacacactggatgaagca
gaacatacattcatacacacacacttcttaccaggcctagccatctgtct
catcagctgaaaaaagagttcatgcattgcttacatactacccacccacc
acccatatggctttcatactatcatgtaaacagtcacatacactgaatgg
atggatggaatgaatgggatggagtggtagggataggtgttgtggtgtgt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_50632772_50633710
seq2: B6Ng01-078G03.b_45_984

seq1  GAATTCAGTGTTTGTGGTTTGAATGAGAATGGCCCCCCATAGGCTAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTTGTGGTTTGAATGAGAATGGCCCCCCATAGGCTAATAG  50

seq1  ATTTTGTGCAATACTTGGTCACCAGAGAGTGACATTATTTAAAAGGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGCAATACTTGGTCACCAGAGAGTGACATTATTTAAAAGGATGA  100

seq1  AGAAATTTGGTCTTGCTGGAGGAAGTGTGCCACTGGGGGTGGGCATAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTGGTCTTGCTGGAGGAAGTGTGCCACTGGGGGTGGGCATAAAG  150

seq1  GTTTCAAAAAGTCCATTCCAAGCCCAGAGTCTCTGTCTTCCTGATGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAAAAGTCCATTCCAAGCCCAGAGTCTCTGTCTTCCTGATGGCTT  200

seq1  TGAATTCAGGTATAGAACTCATTCTCCCAGCCATGATGACAATAGCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAGGTATAGAACTCATTCTCCCAGCCATGATGACAATAGCCTAA  250

seq1  ACTTCTGAAACTTAAAGACAGCCCCAATTAAATGCTTTTTTTTATAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGAAACTTAAAGACAGCCCCAATTAAATGCTTTTTTTTATAAGAG  300

seq1  TTGTCATGGTCATGGTGTCTCTTCACAGTAATGTAACACTGACTAAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATGGTCATGGTGTCTCTTCACAGTAATGTAACACTGACTAAGACC  350

seq1  ATGGAGCATGCTTATAATCCCAGAGCTTAGGATGAGAAGACAGAACCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCATGCTTATAATCCCAGAGCTTAGGATGAGAAGACAGAACCTCA  400

seq1  GAAGTTCATGGTTGTCCTTGGCTGGACTACAAGACACCCAGAAGGTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCATGGTTGTCCTTGGCTGGACTACAAGACACCCAGAAGGTCTAC  450

seq1  AGAGATGGCTCAGTGGATAAGAGGAGGTCGTGTTCTGGCTGAGGGCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGCTCAGTGGATAAGAGGAGGTCGTGTTCTGGCTGAGGGCCCAA  500

seq1  ATTCAGTTCTTATCATCCTCTTCAGTCAGCTTGCACCCACCTGGAACTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTCTTATCATCCTCTTCAGTCAGCTTGCACCCACCTGGAACTCC  550

seq1  ACTTCAAGGGCCCCTCTGGCCTCTGCAGCTGTCTTTACTCCTGTAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAGGGCCCCTCTGGCCTCTGCAGCTGTCTTTACTCCTGTAAACAG  600

seq1  ATCATCACACAGGCAGATACAGAAATACGCACACACTCACGTGCACATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACACAGGCAGATACAGAAATACGCACACACTCACGTGCACATGC  650

seq1  ACACATACACACACACACACACACACACACACAGAGGGGAAAGGGAGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACACACACACACACACACACAGAGGGGAAAGGGAGAGG  700

seq1  AGAAAACTACAAGTAAAATAAATCTTAAAACAATTATTAACAAAACCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTACAAGTAAAATAAATCTTAAAACAATTATTAACAAAACCTAG  750

seq1  GATACCCAAGATATAAGATACAATTTGCTAAACACATGAAACTCAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCAAGATATAAGATACAATTTGCTAAACACATGAAACTCAAGAAA  800

seq1  AAATGAAGACTGAAGTATGGACACTATGCCCCTCCTTAGAAGTGGGAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGACTGAAGTATGGACACTATGCCCCTCCTTAGAAGTGGGAACA  850

seq1  AAACA-CCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAA  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAA  900

seq1  AGGATGGACCATGTAGAGACTGCCATATCCAGGGATCCAC  939
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGACCATGTAGAGACTGCCATATCCAGGGATCCAC  940