BAC Information

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BAC

Clone NameB6Ng01-078G06
Chromosome3 (Build37)
Map Location 28,012,534 - 28,013,606
singlet/doubletsinglet
Overlap genePld1
Upstream geneEct2, Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b, E030011K20Rik
Downstream geneTnik, Slc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527, 6130401L20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078G06.bB6Ng01-078G06.g
ACCDH894102DH894103
length1,137446
definitionDH894102|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G06, 5' end.DH894103|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagactgggctggtcttgaactcacagagtcctgcctc
tgcctcttcattgctgagattaaaggcacataccatcacactcagtgggt
cctatagtttttaaaactaacaaatcctctaaaaccttataaaaattata
tttcctaaagttccttagcatgaaatttcccacttttagttgtacaattc
aggcctgggactaaggttcagtggcagagtacccactttgtgtgtacaag
gctttctatccaatctcagaagtacaaataaataaagactatgattcagt
agatggatttttttgatggttttgtttattttgttattttggttatttgt
ttgagaaaaggtctcaccatgtagaccaggctaccttccaattctacaag
acccatctccctctacctcccaagtgctgactcaaagtcaagtactgcca
cataccacagatttttttgtttgttcgtttgaggcagatttttgagattt
atttttcatatatcccaagttgtccttgcacacgctgtatatctaaggat
aaccttggatgaccttgagtggggatgacctgtctatctaaggatgacct
tggatgaccttaagtggggatgacctgtctatctaaggatgaccttgggt
gaccttgagtggggtggcctatctaaggatgaccttggatgaccttgagt
ggggatgacctgtctatctaaggatgaccttgggtgaccttgagtgcgga
tgacctatctaaggatgaccttggatgaccttgagtggggatgacctgtc
tgtctaaggatgaccttcctctccctcttctgaatgcttagattacagat
gtgcaccactgtacttggtctgtgttctgaatgtttggatttttaagaag
tatattcacagtgctatgtagccatcaccatgacctaattttaagacatt
tcttttctctccccatgcccactactggcatccaattctacctactctct
cagacttagcatcaccataaaactttcttttttgttgctatggattcacc
ggagtaaagaaatttcttaaaatgcaaccggtataacatgtgcctcttgt
gcttgcttctcagttaggccagtactacatgatcatc
attctgctaacctgggtctttttgattggggaattgagtccattgatgtt
gagagatattaatgaccagtgattgttctttcctgttattttgatatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgttttccttgtttttgctggaatgg
agttacttatttcttgtgttttcttggatatagtcttccttgggctggag
ttttccttctagtattttttttttttttggaagactggatttgtggatag
atattgttcacatttggacttatcttgaaatatcttcttttctccttcta
ttatgattgaaagttttgctgggtatagtagattaggttggcatctgcat
ttttttttcagaggtttttgagatatctgttcaggtccttttaaatttta
gagtctcagatgagaaatcaggtggaattctcatattctgccttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_28012534_28013606
seq2: B6Ng01-078G06.b_120_1183 (reverse)

seq1  GATGAATCATGTAGGTACTGGCCTAACTGAAGGAAGCCAGGCACAAGAGG  50
      |||| |||||||| ||||||||||||||||  |||| || ||||||||||
seq2  GATG-ATCATGTA-GTACTGGCCTAACTGA--GAAG-CAAGCACAAGAGG  45

seq1  CCACATGTTATA-CGGTTGCATTTTTATGAAATATCTTTACT-CGGTGAA  98
       ||||||||||| |||||||| ||||| ||||| |||||||| |||||||
seq2  -CACATGTTATACCGGTTGCA-TTTTAAGAAATTTCTTTACTCCGGTGAA  93

seq1  TCCATAGCAAC-AGAAAGAAAGTTTTATGGTGATTGCTAAGGTCTGAGGA  147
      ||||||||||| | ||||||||||||||||||| |||||| |||||| ||
seq2  TCCATAGCAACAAAAAAGAAAGTTTTATGGTGA-TGCTAA-GTCTGA-GA  140

seq1  GAGTAGGTAGAATTGGATGCCAAGTAGGTGGGCATGGGGAGAGAAAAGAA  197
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  GAGTAGGTAGAATTGGATGCC-AGTA-GTGGGCATGGGGAGAGAAAAGAA  188

seq1  ATGTCTTAAAATTAGGTCATGGTGATGGCTACATAGCACTGTGAATATAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAAAATTAGGTCATGGTGATGGCTACATAGCACTGTGAATATAC  238

seq1  TTCTTAAAAATCCAAACATTCAGAACACAGACCAAGTACAGTGGTGCACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAAAATCCAAACATTCAGAACACAGACCAAGTACAGTGGTGCACA  288

seq1  TCTGTAATCTAAGCATTCAGAAGAGGGAGAGGAAGGTCATCCTTAGACAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATCTAAGCATTCAGAAGAGGGAGAGGAAGGTCATCCTTAGACAG  338

seq1  ACAGGTCATCCCCACTCAAGGTCATCCAAGGTCATCCTTAGATAGGTCAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCATCCCCACTCAAGGTCATCCAAGGTCATCCTTAGATAGGTCAT  388

seq1  CCGCACTCAAGGTCACCCAAGGTCATCCTTAGATAGACAGGTCATCCCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCACTCAAGGTCACCCAAGGTCATCCTTAGATAGACAGGTCATCCCCA  438

seq1  CTCAAGGTCATCCAAGGTCATCCTTAGATAGGCCACCCCACTCAAGGTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGTCATCCAAGGTCATCCTTAGATAGGCCACCCCACTCAAGGTCA  488

seq1  CCCAAGGTCATCCTTAGATAGACAGGTCATCCCCACTTAAGGTCATCCAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGTCATCCTTAGATAGACAGGTCATCCCCACTTAAGGTCATCCAA  538

seq1  GGTCATCCTTAGATAGACAGGTCATCCCCACTCAAGGTCATCCAAGGTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCCTTAGATAGACAGGTCATCCCCACTCAAGGTCATCCAAGGTTA  588

seq1  TCCTTAGATATACAGCGTGTGCAAGGACAACTTGGGATATATGAAAAATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGATATACAGCGTGTGCAAGGACAACTTGGGATATATGAAAAATA  638

seq1  AATCTCAAAAATCTGCCTCAAACGAACAAACAAAAAAATCTGTGGTATGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAAAAATCTGCCTCAAACGAACAAACAAAAAAATCTGTGGTATGT  688

seq1  GGCAGTACTTGACTTTGAGTCAGCACTTGGGAGGTAGAGGGAGATGGGTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTACTTGACTTTGAGTCAGCACTTGGGAGGTAGAGGGAGATGGGTC  738

seq1  TTGTAGAATTGGAAGGTAGCCTGGTCTACATGGTGAGACCTTTTCTCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAATTGGAAGGTAGCCTGGTCTACATGGTGAGACCTTTTCTCAAA  788

seq1  CAAATAACCAAAATAACAAAATAAACAAAACCATCAAAAAAATCCATCTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACCAAAATAACAAAATAAACAAAACCATCAAAAAAATCCATCTA  838

seq1  CTGAATCATAGTCTTTATTTATTTGTACTTCTGAGATTGGATAGAAAGCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCATAGTCTTTATTTATTTGTACTTCTGAGATTGGATAGAAAGCC  888

seq1  TTGTACACACAAAGTGGGTACTCTGCCACTGAACCTTAGTCCCAGGCCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACACACAAAGTGGGTACTCTGCCACTGAACCTTAGTCCCAGGCCTG  938

seq1  AATTGTACAACTAAAAGTGGGAAATTTCATGCTAAGGAACTTTAGGAAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACAACTAAAAGTGGGAAATTTCATGCTAAGGAACTTTAGGAAAT  988

seq1  ATAATTTTTATAAGGTTTTAGAGGATTTGTTAGTTTTAAAAACTATAGGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTATAAGGTTTTAGAGGATTTGTTAGTTTTAAAAACTATAGGA  1038

seq1  CCCACTGAGTGTGATGGTATGTGCCT  1073
      ||||||||||||||||||||||||||
seq2  CCCACTGAGTGTGATGGTATGTGCCT  1064