BAC Information

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BAC

Clone NameB6Ng01-079B06
Chromosome3 (Build37)
Map Location 119,725,382 - 119,726,222
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079B06.bB6Ng01-079B06.g
ACCDH894593DH894594
length8451,151
definitionDH894593|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B06, 5' end.DH894594|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgcctccaggcataaacctgtagatcccgtgctctctggaca
cagggaagctgtcggtaagcatggatatgtgcaaaatgccaacactggtg
agtacaagtagactgatcttgaattttaggtcaacctttgtaagactgcg
ttaatcagattcccttcttcatgacacagtactcaaggaagatcattttg
aaggataaaagtttgttttgacccacagcttcagcagtttcactgttttt
ggctaatgatgtgacagaaaaatgtgtcagtggaagacagagattgtgtt
caaaggcagaaaacaatgattcacttcttctaaatatctatccgtgctgt
actagttaccttttagtgctcggataaaacatcaaaaccaatacagttca
tggaagaaatttatcttgtgctcatagttgtagatggctacagtccataa
tgttaggcatcatagacataacatgcataaagacatgccatcaaagatag
gcatggtggataaagcagggagctgagagatcacatcttaaccatagaca
agaggcagaggaagagaaggagggagggaaggaggaaaggggagaaaaag
agagagggagagggagagggagagggagagaacgaactaggtacagggtg
aggctatgacatactttcctggattaaaaactgcattacctcaccaaata
gcatttgcaacttggggggtgaggtgttctaacccctaacccaatgggag
acattttatcatttaacccagcatacttttaccatagcactggatacatt
taataccccatgccatactagaatttttatctattttagaaacct
gaattctcacctgagaaacactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctta
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtatgaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgtgtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacg
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagatcaaagtgtggacactgtgccccttcttagaattggaaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagcagtctcttgtgaggctatgctggggcctagcaaac
acagaagtggatgctcacagtcagcttttggatggatcacaggctcccat
ggagagctagagacagtacccaggagctaagggatctgcaccttataggt
gaacacattatgactaccagtacccgagctcttgactgtagctgcatatg
tatcaaagatgctatcgcatcactggaaggaagcccattgacacgaaact
ttaatgtccagtacaggaatgcaagccaaaaaaggaaaggttggataggg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119725382_119726222
seq2: B6Ng01-079B06.b_46_890

seq1  GAATTCAATGCCTCCAGGCATAAACCTGTAGATCCCGTGCTCTCTGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCTCCAGGCATAAACCTGTAGATCCCGTGCTCTCTGGACA  50

seq1  CAGGGAAGCTGTCGGTAAGCATGGATATGTGCAAAATGCCAACACTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGCTGTCGGTAAGCATGGATATGTGCAAAATGCCAACACTGGTG  100

seq1  AGTACAAGTAGACTGATCTTGAATTTTAGGTCAACCTTTGTAAGACTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGTAGACTGATCTTGAATTTTAGGTCAACCTTTGTAAGACTGCG  150

seq1  TTAATCAGATTCCCTTCTTCATGACACAGTACTCAAGGAAGATCATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGATTCCCTTCTTCATGACACAGTACTCAAGGAAGATCATTTTG  200

seq1  AAGGATAAAAGTTTGTTTTGACCCACAGCTTCAGCAGTTTCACTGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAAAAGTTTGTTTTGACCCACAGCTTCAGCAGTTTCACTGTTTTT  250

seq1  GGCTAATGATGTGACAGAAAAATGTGTCAGTGGAAGACAGAGATTGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATGATGTGACAGAAAAATGTGTCAGTGGAAGACAGAGATTGTGTT  300

seq1  CAAAGGCAGAAAACAATGATTCACTTCTTCTAAATATCTATCCGTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCAGAAAACAATGATTCACTTCTTCTAAATATCTATCCGTGCTGT  350

seq1  ACTAGTTACCTTTTAGTGCTCGGATAAAACATCAAAACCAATACAGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTACCTTTTAGTGCTCGGATAAAACATCAAAACCAATACAGTTCA  400

seq1  TGGAAGAAATTTATCTTGTGCTCATAGTTGTAGATGGCTACAGTCCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAATTTATCTTGTGCTCATAGTTGTAGATGGCTACAGTCCATAA  450

seq1  TGTTAGGCATCATAGACATAACATGCATAAAGACATGCCATCAAAGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGCATCATAGACATAACATGCATAAAGACATGCCATCAAAGATAG  500

seq1  GCATGGTGGATAAAGCAGGGAGCTGAGAGATCACATCTTAACCATAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGGATAAAGCAGGGAGCTGAGAGATCACATCTTAACCATAGACA  550

seq1  AGAGGCAGAGGAAGAGAAGGAGGGAGGGAAGGAGGAAAGGGGAGAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGAGGAAGAGAAGGAGGGAGGGAAGGAGGAAAGGGGAGAAAAAG  600

seq1  AGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAACGAACTAGGTACAGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAACGAACTAGGTACAGGGTG  650

seq1  AGGCTATGACATAC-TTCCTGGATTAAAAACTGCATTACCTCACCAAATA  699
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGGCTATGACATACTTTCCTGGATTAAAAACTGCATTACCTCACCAAATA  700

seq1  GCA-TTGCAACTTGGGGGGTGAGGTGTTCTAACCCCTAACCCAATGGGAG  748
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGCAACTTGGGGGGTGAGGTGTTCTAACCCCTAACCCAATGGGAG  750

seq1  ACA-TTTATCATTTAACCCAGCATAC-TTTACCAAAGCACTGGAGACATT  796
      ||| |||||||||||||||||||||| ||||||| ||||||||| |||||
seq2  ACATTTTATCATTTAACCCAGCATACTTTTACCATAGCACTGGATACATT  800

seq1  TAATA-CCCAAGCCATAACAAGATTTTTATCAAATTTTAGAAACTT  841
      ||||| |||| ||||||  |  |||||||||  ||||||||||| |
seq2  TAATACCCCATGCCATACTAGAATTTTTATC-TATTTTAGAAACCT  845