BAC Information

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BAC

Clone NameB6Ng01-079N14
Chromosome3 (Build37)
Map Location 6,764,827 - 6,765,851
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041165, LOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
Downstream geneEG667801, Pkia, LOC667807, 3110050N22Rik, Il7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079N14.bB6Ng01-079N14.g
ACCDH895143DH895144
length1,0191,234
definitionDH895143|Mus musculus domesticus DNA, BAC clone: B6Ng01-079N14, 5' end.DH895144|Mus musculus domesticus DNA, BAC clone: B6Ng01-079N14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatttcaaactattttaatattccaccacacccccatcagaat
ggccattatgaggaatttaaatgacaagttcaggcataaatacaggaaaa
gttgaaaccttggacacagtgatattttataatatatgggtacaaatttg
aaatatgttgctttgttttttaacttgtagtacatgtacaaatcccagat
tatatatattggttaagggggtcactaattgagagataggagaccataga
atgtaactgaaattaaataaagaaaaaacattcaagtaagtcacatgttg
atggtagaaaaacagggaagtagggaaagaattcacaataatgaaggatt
tggttttaaatatcataactccagttagaaaaattttacttcactagtta
taataatgttctctatcagaatagagatgcaatgatattgtttgtgtggt
tgtgctgtttaccaagcttaaattacaaaggaaaatactctggaaaattt
taaattaaaatataacaattgctctcaagatatccttatatagataggac
tttctcctcatgtttttttcacagacaagcgaaaatcaagcatataaatt
tctcaattattgtaataataatattattattaattaaaatatttaatcct
taaaaatgattgtcccattaaaaatgtttaaaagaaactctaaaacacag
tgagacacacctttatgtccaatagccaggaggcagatgcaggtgaattc
tatgactttaagaccagccttgtcacatagccaagtcctatcctaaccag
ggatacacaggaaaatccttctcaaattaaataagtattttttatttatt
aaataaaaataaatgataaattgataaataaatgaaaaaaattacatcta
ttactaaattttagtgagtttaaaattctgtattgcaataaaggtaaaac
attttattataattaataacaaagttgaaaaatatgtatagctttctcac
catatcctgtctatttcac
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgattgtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
ctttagatgtgttgtcaagctgctagtatgtgctcttctcccgtttttct
tgaggcactcatagctatgagtttccctcttagaaatgctttcattgtgt
cccaaaggtttgggtacgttgtggcttcatttcataaactctaaaagtct
ttatttccttctttattcttcttgacaggattcattgaagagaagggttg
ttcagtttcatgtgatggtggcttcgtattatttgttatgaagatagctt
atggcagtggatctgaggaactggtcatcaattgaacttgtgaggctgaa
ttggactcattatgtggccaacttggaagaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6764827_6765851
seq2: B6Ng01-079N14.b_46_1064

seq1  GAATTCAGATTTCAAACTATTTTAATATTCCACCACACCCCCATCAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTTCAAACTATTTTAATATTCCACCACACCCCCATCAGAAT  50

seq1  GGCCATTATGAGGAATTTAAATGACAAGTTCAGGCATAAATACAGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTATGAGGAATTTAAATGACAAGTTCAGGCATAAATACAGGAAAA  100

seq1  GTTGAAACCTTGGACACAGTGATATTTTATAATATATGGGTACAAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAACCTTGGACACAGTGATATTTTATAATATATGGGTACAAATTTG  150

seq1  AAATATGTTGCTTTGTTTTTTAACTTGTAGTACATGTACAAATCCCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTTGCTTTGTTTTTTAACTTGTAGTACATGTACAAATCCCAGAT  200

seq1  TATATATATTGGTTAAGGGGGTCACTAATTGAGAGATAGGAGACCATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATTGGTTAAGGGGGTCACTAATTGAGAGATAGGAGACCATAGA  250

seq1  ATGTAACTGAAATTAAATAAAGAAAAAACATTCAAGTAAGTCACATGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACTGAAATTAAATAAAGAAAAAACATTCAAGTAAGTCACATGTTG  300

seq1  ATGGTAGAAAAACAGGGAAGTAGGGAAAGAATTCACAATAATGAAGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGAAAAACAGGGAAGTAGGGAAAGAATTCACAATAATGAAGGATT  350

seq1  TGGTTTTAAATATCATAACTCCAGTTAGAAAAATTTTACTTCACTAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAAATATCATAACTCCAGTTAGAAAAATTTTACTTCACTAGTTA  400

seq1  TAATAATGTTCTCTATCAGAATAGAGATGCAATGATATTGTTTGTGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGTTCTCTATCAGAATAGAGATGCAATGATATTGTTTGTGTGGT  450

seq1  TGTGCTGTTTACCAAGCTTAAATTACAAAGGAAAATACTCTGGAAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTTTACCAAGCTTAAATTACAAAGGAAAATACTCTGGAAAATTT  500

seq1  TAAATTAAAATATAACAATTGCTCTCAAGATATCCTTATATAGATAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAAATATAACAATTGCTCTCAAGATATCCTTATATAGATAGGAC  550

seq1  TTTCTCCTCATGTTTTTTTCACAGACAAGCGAAAATCAAGCATATAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCATGTTTTTTTCACAGACAAGCGAAAATCAAGCATATAAATT  600

seq1  TCTCAATTATTGTAATAATAATATTATTATTAATTAAAATATTTAATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTATTGTAATAATAATATTATTATTAATTAAAATATTTAATCCT  650

seq1  TAAAAATGATTGTCCCATTAAAAATGTTTAAAAGAAACTCTAAAACACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGATTGTCCCATTAAAAATGTTTAAAAGAAACTCTAAAACACAG  700

seq1  TGAGACACACCTTTATGTCCAATAGCCAGGAGGCAGATGCAGGTGAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACACACCTTTATGTCCAATAGCCAGGAGGCAGATGCAGGTGAATTC  750

seq1  TATGACTTTAAGACCAGCCTTGTCACATAGCCAAGTCCTATCCTAACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTTAAGACCAGCCTTGTCACATAGCCAAGTCCTATCCTAACCAG  800

seq1  GGATACACAGGAAAATCCTTCTCAAATTAAATAAGTATTTTTTATTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACACAGGAAAATCCTTCTCAAATTAAATAAGTATTTTTTATTTATT  850

seq1  AAATAAAAATAAATGATAAATTGATAAATAAATGAAAAAAATTACATCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAATAAATGATAAATTGATAAATAAATGAAAAAAATTACATCTA  900

seq1  TTACTAAATTTTAGTGAGTTTAAAATTCTGTATTGCAATAAAGGTAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTACTAAATTTTAGTGAGTTTAAAATTCTGTATTGCAATAAAGGT-AAAA  949

seq1  CATTTTATTATAATTAATAACAAAGGTTGAAAAATATGTTATAGCTTTCT  1000
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  CATTTTATTATAATTAATAACAAA-GTTGAAAAATATG-TATAGCTTTCT  997

seq1  CACCATATCCTGTTCTTAATTTCAC  1025
      |||||||||||| |||  |||||||
seq2  CACCATATCCTG-TCT--ATTTCAC  1019