BAC Information

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BAC

Clone NameB6Ng01-080D10
Chromosome3 (Build37)
Map Location 59,700,848 - 59,808,576
singlet/doubletdoublet
Overlap geneC130079G13Rik, LOC676914
Upstream geneLOC100040416, Gpr171, P2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803
Downstream geneAadacl2, Aadac, Sucnr1, LOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080D10.bB6Ng01-080D10.g
ACCDH895414DH895415
length1,050823
definitionDH895414|Mus musculus domesticus DNA, BAC clone: B6Ng01-080D10, 5' end.DH895415|Mus musculus domesticus DNA, BAC clone: B6Ng01-080D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,807,519 - 59,808,576)(59,700,848 - 59,701,671)
sequence
gaattctcaactgaggaatacagaatggctgagaagcccctaaaaaaatg
ttcaacatcctttgtaattagggaattgcaaatcaaaacaaccctgagat
tctacctcacaccagtcagaaggactaagaaaagaatctcaggtgacagc
agaagctggcaaggatgtggagaaagaggaatgaagccctttcattgctg
gtgggattgtaagctggtacaaccactatgaagattagtttggcagttct
tcacaggattggacataatactacctgagctataccactcctggacatat
acccagaagatgcttcaatatgtaataaggatacctggccactgtgttca
tagtagccttatatacctttttgttattatgcaatatttaatctctcttc
tctaaattctatgttgatactttattttgaattaacccattttttaaact
aggatttatttttttgaagagatgatttgctcaataagatccactaagtc
aaaatagtagacatcaaggcccacattacttgaattaccaatatgctcac
tttattatatatcttgcaatcttttttcgtgaattgccaaagcataactt
aagataatctaccatttaaagaaagctactaaaagcaataatcaatacta
tattacacacataagagtaactgttctgtaagaacttatgtccatctttt
caaataagttataaaaaggtgaactatgtccttgtaacacctgaggattt
agtgcttttcacatatacaacttcaataaaatttttctgtaagtaatgaa
caacctctatagttggtcaataaatgcctaatggaatgagtagggagtca
ctcacatcaaaaagtaataatggaattcagattctaagataaagggcagt
ctttgatacaaagcaaaagagaacacatctaagtcaaagaatgttactgc
tttcacctgatagtgcaaatttatgcacacaaatgatagagagagctgtg
ggagaaagatggatatgtttgaaaacagtgactttggagaggttataaaa

gaattcattcctctgtgtttatagggcttgaacctcactgagatattggg
ttatgtgttgtcttctcggtttgaacctaactcaccctcgatctcttcca
ccaaagtagcccccacccccaccccaactagttctgtcttgtgattttga
gagtcaaccagacacacattaaatcaatccatgaaaacatttcttaggtt
ttgtttccttttacatttataattttctctgattctgttgacataaattt
tactagcatgcccttcatgccttcatatctatgtttttcctaaaaccatc
aaatgaattaattttatagtttcttgacattctttcctataaaggaaaaa
tatgatttccgatgctagacagtttaaaaccttttataaaaaattttctt
tcttactgattagaattttgaccttgaaaccttgagggtaaagagagcta
atctgaccagatgggaaggggagggaggataagatccattggatttcata
tgagttctatacacttcagaggagacagggtaggaagaacattccaaagt
aacctaatgttttaaatattgagttgatgcttttaggatgcacatgtgag
attgttccgttcaactggtttgcagcatccctaatttttcttccatttat
gatccataccctagtagttccccaaattgtagaatgacttttgatcctga
tgttccagtgttcagatggacatcaaagcagagttgcattatgattgcaa
catgagagaaatagagtgccaggaaaggtttctgcccaacaagttatgag
gaaggtgggagagctctcacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59807519_59808576
seq2: B6Ng01-080D10.b_47_1096 (reverse)

seq1  TTTTATAACCTCTCCAAAGTCACCTGTTTTCAAACATTATCCATCTTTTC  50
      |||||||||||||||||||||| ||||||||||||| |||||||| ||||
seq2  TTTTATAACCTCTCCAAAGTCA-CTGTTTTCAAACA-TATCCATC-TTTC  47

seq1  TCCCACAGCTTCTCTCTTATCATTTGTGTGCATAAATTTGCACTATCAGG  100
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  TCCCACAGC-TCTCTC-TATCATTTGTGTGCATAAATTTGCACTATCAGG  95

seq1  TGAAAGCAGTAACATTTCTTTGACCTTAGATGTGTTCTCTTTTGCTTTGT  150
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  TGAAAGCAGTAACA-TTCTTTGA-CTTAGATGTGTTCTCTTTTGCTTTGT  143

seq1  ATCAAAGACTGCCCTTTATCTTAGAATCTGAATTCCATTATTACTTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGACTGCCCTTTATCTTAGAATCTGAATTCCATTATTACTTTTTG  193

seq1  ATGTGAGTGACTCCCTACTCATTCCATTAGGCATTTATTGACCAACTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGTGACTCCCTACTCATTCCATTAGGCATTTATTGACCAACTATA  243

seq1  GAGGTTGTTCATTAACTTACAGAAAAATTTTATTGAAGTTGTATATGTGA  300
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTTCATT-ACTTACAGAAAAATTTTATTGAAGTTGTATATGTGA  292

seq1  AAAGCACTAAATCCTCAGGTGTTACAAGGACATAGTTCACCTTTTTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTAAATCCTCAGGTGTTACAAGGACATAGTTCACCTTTTTATAA  342

seq1  CTTATTTGAAAAGATGGACATAAGTTCTTACAGAACAGTTACTCTTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTGAAAAGATGGACATAAGTTCTTACAGAACAGTTACTCTTATGT  392

seq1  GTGTAATATAGTATTGATTATTGCTTTTAGTAGCTTTCTTTAAATGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATATAGTATTGATTATTGCTTTTAGTAGCTTTCTTTAAATGGTAG  442

seq1  ATTATCTTAAGTTATGCTTTGGCAATTCACGAAAAAAGATTGCAAGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTAAGTTATGCTTTGGCAATTCACGAAAAAAGATTGCAAGATAT  492

seq1  ATAATAAAGTGAGCATATTGGTAATTCAAGTAATGTGGGCCTTGATGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAGTGAGCATATTGGTAATTCAAGTAATGTGGGCCTTGATGTCT  542

seq1  ACTATTTTGACTTAGTGGATCTTATTGAGCAAATCATCTCTTCAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTGACTTAGTGGATCTTATTGAGCAAATCATCTCTTCAAAAAAA  592

seq1  TAAATCCTAGTTTAAAAAATGGGTTAATTCAAAATAAAGTATCAACATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTAGTTTAAAAAATGGGTTAATTCAAAATAAAGTATCAACATAG  642

seq1  AATTTAGAGAAGAGAGATTAAATATTGCATAATAACAAAAAGGTATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAGAAGAGAGATTAAATATTGCATAATAACAAAAAGGTATATAA  692

seq1  GGCTACTATGAACACAGTGGCCAGGTATCCTTATTACATATTGAAGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTATGAACACAGTGGCCAGGTATCCTTATTACATATTGAAGCATC  742

seq1  TTCTGGGTATATGTCCAGGAGTGGTATAGCTCAGGTAGTATTATGTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTATATGTCCAGGAGTGGTATAGCTCAGGTAGTATTATGTCCAA  792

seq1  TCCTGTGAAGAACTGCCAAACTAATCTTCATAGTGGTTGTACCAGCTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGAAGAACTGCCAAACTAATCTTCATAGTGGTTGTACCAGCTTAC  842

seq1  AATCCCACCAGCAATGAAAGGGCTTCATTCCTCTTTCTCCACATCCTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCACCAGCAATGAAAGGGCTTCATTCCTCTTTCTCCACATCCTTGC  892

seq1  CAGCTTCTGCTGTCACCTGAGATTCTTTTCTTAGTCCTTCTGACTGGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTGCTGTCACCTGAGATTCTTTTCTTAGTCCTTCTGACTGGTGT  942

seq1  GAGGTAGAATCTCAGGGTTGTTTTGATTTGCAATTCCCTAATTACAAAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGAATCTCAGGGTTGTTTTGATTTGCAATTCCCTAATTACAAAGG  992

seq1  ATGTTGAACATTTTTTTAGGGGCTTCTCAGCCATTCTGTATTCCTCAGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAACATTTTTTTAGGGGCTTCTCAGCCATTCTGTATTCCTCAGTT  1042

seq1  GAGAATTC  1058
      ||||||||
seq2  GAGAATTC  1050

seq1: chr3_59700848_59701671
seq2: B6Ng01-080D10.g_69_891

seq1  GAATTCATTCCTCTGTGTTTATAGGGCTTGAACCTCACTGAGATATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCTCTGTGTTTATAGGGCTTGAACCTCACTGAGATATTGGG  50

seq1  TTATGTGTTGTCTTCTCGGTTTGAACCTAACTCACCCTCGATCTCTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTTGTCTTCTCGGTTTGAACCTAACTCACCCTCGATCTCTTCCA  100

seq1  CCAAAGTAGCCCCCACCCCCACCCCAACTAGTTCTGTCTTGTGATTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTAGCCCCCACCCCCACCCCAACTAGTTCTGTCTTGTGATTTTGA  150

seq1  GAGTCAACCAGACACACATTAAATCAATCCATGAAAACATTTCTTAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAACCAGACACACATTAAATCAATCCATGAAAACATTTCTTAGGTT  200

seq1  TTGTTTCCTTTTACATTTATAATTTTCTCTGATTCTGTTGACATAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCTTTTACATTTATAATTTTCTCTGATTCTGTTGACATAAATTT  250

seq1  TACTAGCATGCCCTTCATGCCTTCATATCTATGTTTTTCCTAAAACCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCATGCCCTTCATGCCTTCATATCTATGTTTTTCCTAAAACCATC  300

seq1  AAATGAATTAATTTTATAGTTTCTTGACATTCTTTCCTATAAAGGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTAATTTTATAGTTTCTTGACATTCTTTCCTATAAAGGAAAAA  350

seq1  TATGATTTCCGATGCTAGACAGTTTAAAACCTTTTATAAAAAATTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTCCGATGCTAGACAGTTTAAAACCTTTTATAAAAAATTTTCTT  400

seq1  TCTTACTGATTAGAATTTTGACCTTGAAACCTTGAGGGTAAAGAGAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTGATTAGAATTTTGACCTTGAAACCTTGAGGGTAAAGAGAGCTA  450

seq1  ATCTGACCAGATGGGAAGGGGAGGGAGGATAAGATCCATTGGATTTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACCAGATGGGAAGGGGAGGGAGGATAAGATCCATTGGATTTCATA  500

seq1  TGAGTTCTATACACTTCAGAGGAGACAGGGTAGGAAGAACATTCCAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTATACACTTCAGAGGAGACAGGGTAGGAAGAACATTCCAAAGT  550

seq1  AACCTAATGTTTTAAATATTGAGTTGATGCTTTTAGGATGCACATGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAATGTTTTAAATATTGAGTTGATGCTTTTAGGATGCACATGTGAG  600

seq1  ATTGTTCCGTTCAACTGGTTTGCAGCATCCCTAA-TTTTCTTCCATTTAT  649
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTGTTCCGTTCAACTGGTTTGCAGCATCCCTAATTTTTCTTCCATTTAT  650

seq1  GATCCATACCCTAGTAGTTCCCCAAATTGTAGAATGACTTTTGATCCTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATACCCTAGTAGTTCCCCAAATTGTAGAATGACTTTTGATCCTGA  700

seq1  TGTTCCAGTGTTCAGATGGACATCAAAGCAGAGTTGCATTATGATTGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGTGTTCAGATGGACATCAAAGCAGAGTTGCATTATGATTGCAA  750

seq1  CATGAGAGAAATAAGAGTGCCAGGAAAGGTTTCTGCCCAACAAGTTAATG  799
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  CATGAGAGAAAT-AGAGTGCCAGGAAAGGTTTCTGCCCAACAAGTT-ATG  798

seq1  AGGAAGGTGGGAGAGCCCTCACCTG  824
      |||||||||||||||| ||||||||
seq2  AGGAAGGTGGGAGAGCTCTCACCTG  823