MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-080I08
Chromosome	3 (Build37)
Map Location	8,245,670 - 8,245,943
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Pkia, LOC667807, 3110050N22Rik, Il7, LOC620822, LOC633072
Downstream gene	LOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52, LOC100041389, LOC667886, Zbtb10
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pkia (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18767 MGI:104747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	3110050N22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67306 MGI:1914556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16196 MGI:96561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620822 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC633072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC545500 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 156 ESTs, 5 Proteins pseudo : _no_value

name	LOC620966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 42 ESTs, 5 Proteins pseudo : _no_value

name	Stmn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20257 MGI:98241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hey1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15213 MGI:1341800
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Mrps28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66230 MGI:1913480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpd52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	LOC100041389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667886 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 2 Proteins pseudo : _no_value

name	Zbtb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229055 MGI:2139883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 119 ESTs, 1 Protein

name	Pkia (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865954 GeneID:18767 MGI:104747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase inhibitor, alpha transcript_id : NM_008862.3

name	3110050N22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637813 GeneID:67306 MGI:1914556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110050N22 gene transcript_id : NM_173181.3

name	Il7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372734 GeneID:16196 MGI:96561
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 7 transcript_id : NM_008371.3

name	Stmn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130361 GeneID:20257 MGI:98241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stathmin-like 2 transcript_id : NM_025285.2

name	Hey1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606331 GeneID:15213 MGI:1341800
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy/enhancer-of-split related with YRPW motif 1 transcript_id : NM_010423.2

name	LOC100039504 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250594 GeneID:100039504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039504 transcript_id : XM_001473019.1

name	Mrps28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981287 GeneID:66230 MGI:1913480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S28 transcript_id : NM_025434.2

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608203 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_009412.2

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608213 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025263.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608204 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025264.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608197 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025262.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608193 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025261.1

name	LOC100041389 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250619 GeneID:100041389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041389 transcript_id : XM_001476491.1

name	Zbtb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250597 GeneID:229055 MGI:2139883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 119 ESTs, 1 Protein product : zinc finger and BTB domain containing 10, transcript variant 1 transcript_id : XM_485202.5

name	Pkia (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679359 GeneID:18767 MGI:104747
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : protein kinase inhibitor, alpha protein_id : NP_032888.1

name	3110050N22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27502351 CCDS:CCDS17230.1 GeneID:67306 MGI:1914556
definition	codon_start : 1 product : hypothetical protein LOC67306 protein_id : NP_775273.1

name	Il7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680433 GeneID:16196 MGI:96561
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0008083 - growth factor activity [Evidence IDA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA]; GO:0005139 - interleukin-7 receptor binding [Evidence IEA] [Evidence ISS] GO_process : GO:0045453 - bone resorption [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS]; GO:0045582 - positive regulation of T cell differentiation [Evidence IDA] codon_start : 1 product : interleukin 7 protein_id : NP_032397.1

name	Stmn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384630 CCDS:CCDS17231.1 GeneID:20257 MGI:98241
definition	GO_component : GO:0030426 - growth cone [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : superiorcervical ganglia, neural specific 10 product : stathmin-like 2 protein_id : NP_079561.1

name	Hey1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606332 CCDS:CCDS17232.1 GeneID:15213 MGI:1341800
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IGI] codon_start : 1 note : Hairy/E(spl)-related with YRPW motif 1 product : hairy/enhancer-of-split related with YRPW motif 1 protein_id : NP_034553.2

name	LOC100039504 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250595 GeneID:100039504
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473069.1

name	Mrps28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981288 CCDS:CCDS17233.1 GeneID:66230 MGI:1913480
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial ribosomal protein S28 protein_id : NP_079710.2

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678407 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 5 is encoded by transcript variant 5 product : tumor protein D52 isoform 5 protein_id : NP_033438.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608214 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : tumor protein D52 isoform 3 protein_id : NP_001020434.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608205 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 4 is encoded by transcript variant 4 product : tumor protein D52 isoform 4 protein_id : NP_001020435.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608198 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : tumor protein D52 isoform 2 protein_id : NP_001020433.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608194 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : tumor protein D52 isoform 1 protein_id : NP_001020432.1

name	LOC100041389 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250620 GeneID:100041389
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476541.1

name	Zbtb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250598 GeneID:229055 MGI:2139883
definition	codon_start : 1 product : zinc finger and BTB domain containing 10 isoform 1 protein_id : XP_485202.5

name	LOC620822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620822
definition	number : 1 pseudo : _no_value

name	LOC620822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620822
definition	number : 2 pseudo : _no_value

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 1 pseudo : _no_value

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 2 pseudo : _no_value

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 3 pseudo : _no_value

name	LOC667807 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250592 GeneID:667807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to ubiquitin-like domain containing CTD phosphatase 1 pseudo : _no_value transcript_id : XR_030888.1

name	LOC545500 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250593 GeneID:545500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 156 ESTs, 5 Proteins product : similar to ubiquitin specific protease 1 pseudo : _no_value transcript_id : XR_030927.1

name	LOC620966 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250618 GeneID:620966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 42 ESTs, 5 Proteins product : similar to Expressed sequence AI840826 pseudo : _no_value transcript_id : XR_032665.1

name	LOC667886 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250596 GeneID:667886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_031014.1

clone name	MSMg01-499C07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-517D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408I08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-097O15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-080I08.b	B6Ng01-080I08.g
ACC	DH895637	DH895638
length	1,003	302
definition	DH895637\|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I08, 5' end.	DH895638\|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I08, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgcttcacaatgataggaagagccgacatcgaaggatcaaaaag cgacgtcgctatgaacgcttggccgccacaagccagttatccctgtggta acttttctgacacctcctgcttaaaacccaaaaggtcagaaggatcgtga ggccccgctttcacggtctgtattcgtactgaaaatcaagatcaagcgag cttttgcccttctgctccacgggaggtttctgtcctccctgagctcgcct taggacacctgcgttaccgtttgacaggtgtaccgccccagtcaaactcc ccacctggcactgtccccggagcgggtcgcgcccgcccgcacgcgcggga cggacgcttggcgccagaagcgagagcccctcggggctcgcccccccgcc tcaccgggtcagtgaaaaaacgatgagagtagtggtatttcaccggcggc ccgcgaggccggcgtgccccgaccccgacgcgaggacggggccgggcgcc gggggcctcccacttattctacacctctcatgtctcttcaccgtgccaga ctagagtcaagctcaacagggtcttctttccccgctgattccgccaagcc cgttcccttggctgtggtttcgctggatagtaggtagggacagtgggaat ctcgttcatccattcatgcgcgtcactaattagatgacgaggcatttggc taccttaagagagtcatagttactcccgccgtttacccgcgcttcattga atttcttcactttgacattcagagcactgggcagaaatcacatcgcgtca acacccgccgcgggccttcgcgatgctttttttaattaaacagtcggatt cccctggtccgcaccagttctaagtcggctgctaggcgccggccgaggcg aggcgccgcgcggaaaaccgcggcccggggggcggacccagcgggggatc accgacgcggagttcccccacacctctgggtagtccgctctcccctctca ctc	tctgaactcactgtcctttcaggtccacatttgctctggctctggcaact gactgaaccaaacaattaggctcatacctagaactttggaaatggtaatg gagttgataacacaccctaacagaaagaggaaggctccactcactagtac actttcactagaagcctcaccctgtcagcagtttaggaatttgtaaagcc aatctggacaatatttaaatggtttggaatttctacttcatgtttttttt ttttttttttttttttagacagggtttctctgtatagccctggctgtcct gg
quality values	Open. Hide. 61 47 37 47 55 38 38 31 61 61 55 49 27 49 32 52 55 61 59 61 59 52 61 59 59 52 61 39 43 36 12 26 23 18 32 18 35 43 59 52 61 59 49 59 52 59 59 59 59 44 59 59 59 59 59 61 59 49 59 61 59 61 61 61 61 59 61 61 59 61 61 59 52 59 52 59 59 49 59 59 61 61 61 61 61 61 61 61 61 61 61 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 59 55 59 59 61 59 59 61 61 59 61 61 59 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 59 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 59 59 59 61 61 59 59 61 59 52 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 55 61 52 61 55 55 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 55 61 50 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 50 50 61 53 61 61 52 61 61 61 61 53 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 36 61 61 61 47 61 61 50 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 52 53 61 47 42 40 52 61 40 61 45 61 61 61 61 61 50 61 61 53 61 42 61 50 57 47 57 57 53 52 53 53 50 57 53 53 53 53 38 53 57 57 57 53 53 50 34 53 57 53 34 53 53 53 22 47 57 52 53 53 53 53 53 42 47 53 47 47 53 53 40 45 53 43 50 53 50 45 53 53 57 45 30 33 57 57 53 43 33 52 42 52 53 53 34 36 37 21 57 30 52 24 34 53 45 37 50 52 57 38 38 57 53 57 57 53 50 50 41 33 15 57 57 41 33 57 53 39 53 50 57 52 36 42 28 34 53 50 40 53 23 57 43 52 53 53 50 36 42 53 57 53 53 41 42 29 53 53 52 28 14 57 21 38 30 37 40 52 57 38 35 42 31 40 53 18 26 42 37 37 28 40 53 40 53 44 36 42 11 25 25 23 53 53 53 40 33 53 33 45 40 57 25 15 57 28 33 33 29 37 32 37 13 17 40 40 11 7 5 7 9 24 43 5 12 30 20 51 30 32 28 31 29 44 14 25 31 14 48 37 51 51 34 29 26 29 30 39 30 29 28 28 30 30 29 18 18 15 15 28 35 22 12 10 11 23 29 28 28 30 17 28 28 19 34 19 29 48 33 34 24 17 30 18 43 27 26 21 14 43 16 30 12 28 27 32 27 28 28 30 29 23 30 36 41 41 20 22 21 27 29 24 14 22 14 27 29 29 36 24 39 8 13 24 33 22 38 25 5 27 20 28 28 28 29 18 31 7 11 7 14 14 9 16 17 6 26 17 5 14 7 10 8 8 5 10 17 19 10 16 22 6 17 14 10 12 10 16 18 6 11 8 4 13 19 8 8 10 15 12 16 9 19 12 8 7 5 14 8 8 6 5	Open. Hide. 39 38 31 26 30 26 28 44 43 35 59 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 43 36 36 13 36 32 24 24 41 52 45 49 36 36 36 36 33 35 35 36 43 39 29 35 59 50 35 49 43 27 36 43 34 43 49 41 52 36

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_8245670_8245943
seq2: B6Ng01-080I08.g_156_374 (reverse)

seq1  CCAGGACAGCCAAGGCTAAACAGAGAAACCCTGTCTCAAAAAAAAAAAAA  50
      |||||||||||| ||||| ||||||||||||||||| |||||||||||||
seq2  CCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTAAAAAAAAAAAAAA  50

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAACCAAACCAAACCAAA  100
      ||||||||||                                        
seq2  AAAAAAAAAA----------------------------------------  60

seq1  AAACCCAAAACACCAAAACCAAAATTTAGAAATATCAAGCCATGTAAATA  150
                         ||  |  |||||||  ||| |||| ||||||
seq2  -------------------CATGAAGTAGAAATTCCAAACCATTTAAATA  91

seq1  CTGTCCAGAATATTCTGTCCTTAGAAATCCTTGAA---GTAGCAGGGCAG  197
       ||||||||      || | ||| |||| | | ||    |  |||||   
seq2  TTGTCCAGA-----TTGGCTTTACAAATTCCTAAACTGCTGACAGGGTGA  136

seq1  GGCT--GGGTGAGAGTG----AATGAGTGGAGCCTTCCTCTTTCTGGTAG  241
      ||||    |||| ||||    | ||||||||||||||||||||||| |||
seq2  GGCTTCTAGTGAAAGTGTACTAGTGAGTGGAGCCTTCCTCTTTCTGTTAG  186

seq1  GGCATGTTAGCAACTCCATTACCATTTCCAAAG  274
      ||  ||||| |||||||||||||||||||||||
seq2  GGTGTGTTATCAACTCCATTACCATTTCCAAAG  219

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information