BAC Information

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BAC

Clone NameB6Ng01-080O05
Chromosome3 (Build37)
Map Location 19,141,625 - 19,142,799
singlet/doubletsinglet
Overlap genePde7a
Upstream geneCyp7b1, LOC622921, LOC100040153, Armc1, Mtfr1
Downstream geneDnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O05.bB6Ng01-080O05.g
ACCDH895900DH895901
length1,1561,054
definitionDH895900|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O05, 5' end.DH895901|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaacaattcaccatcaaatagtccatgtgctgcagtcttaaa
tcagattttaaaagtctggcagcgagttctactgggtacctggtgagcag
gcgaggcactcaagcctcaccgactcctgggaacaggcagtaagtaccat
ggctcagctgtagcagaaagctgtcatggtgactgaagagtccaaggtca
gggacttggagagcacagtaaacccacaccacactgtcactcaagtattt
gctgttcagggttgtttgtttgtttgttttgctattttgggacagggtct
ttctacatagctctggctgtcctcgaacacagagatctttctccctctac
ctcctgggtgctgggagattaaaggcatgcatggcttgctaaccatttct
ttcttttcttttgctgaattctggggtatttattgacaatctttaaatat
cattcaaacctagcagtaaagcagtcagctctgaggatgatacacactgt
agacaacaaacacatccaaagtccacggcacagaagtgtgcgcttttaaa
gtaaaggtttttattttgtatccctaagtttgctgtggtataagatgaag
aattaaacaccacaagtaatattagtgtgacacttgtgaaggttgaaagc
acagtgtcaggaaccagcaataacacacaggtcaacactctaaccgcgac
agcaggtcaacagttcccactgactgatctactaagcagggaatgattct
tttctttatattgtaatgaaacttcaaagaagacaccctgcagccagtct
atataactttagaaatctggcctgtaaaatttaaggaacaaataagttca
cgtacattaaaattcaagattatatgaaatcccatttgatcaaaaccaaa
cccatttcacttctatcttacttaagacatttcctgaaaagtctgtagaa
taaagtaaataattcttactaataccatttcggttaagattagctaaccc
tccatatcatctgactgaaaagatggccccccctcctgagctgtctgtat
ggactatggggcagcacatctgtattgagttcagaccccgtgtcttatac
agcactaaagcatcagatcaggccggctccatctccagcacccactagtg
ctagct
gaattcttgggatgaagcctacttgctcatagtgaatgatctttggatgt
gttcttggattcagtttgtgagaattttattgtgtatttttgcatcaata
ttcataagggaaattggtctggagttctctttctttgttgggtctttgag
tgggtcagtgtaacagtggcttcatagaaagaattgggtagtgttccttc
tgtttgtgctttgtggaattgttttagaactatttgtattaggtcttctt
tgaaagtctgatagaattctgctctaaaactgtctagtactgggcttttt
tggagggcgggggtagacttctaatgactacttctgtttctttaggagtt
atgggactgtttagatggtttatctgatcctgatttaattttggtaccta
gtatctttttagaaaattgtatatttcatctagattttctaggtttcttg
aatatagacttttgtagtaggatctgatgatttttaaattttctcatttt
cagttgttatgtctccctttacattcctgattttgttaatttggatattg
actctgtgccctctaattagtttggctaagaatttatctttttgttgatt
ttctcaaagaaacatctctagttttgttgattctttgtatagttttcttt
gcttctacttggttgctttcagccctgagtttgattatttcctgctgttt
actcctcttgggtgtatttgcttctttttgttctagagctttctagtgct
gtcaagctgctagtgtatgctctctccagtttcttttttggaggttctca
gagctatgagttttcctctagcactgctttcattgcatcccataagttgg
ggtatgttgtgccttcatttcattaaatttaaaaaattaaattgcttctt
tatttcttccttgaccaagtatcattgagtaggcatgttcagcttcatgt
gtatgtgagctttctgttgttttgttgctattgaagacagctttatcatg
gtgtctgacgagtgcatgggaataatcaatgtcctatatcggtggagttg
ttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_19141625_19142799
seq2: B6Ng01-080O05.b_47_1202

seq1  GAATTCTGAAACAATTCACCATCAAATAGTCCATGTGCTGCAGTCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAACAATTCACCATCAAATAGTCCATGTGCTGCAGTCTTAAA  50

seq1  TCAGATTTTAAAAGTCTGGCAGCGAGTTCTACTGGGTACCTGGTGAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTTAAAAGTCTGGCAGCGAGTTCTACTGGGTACCTGGTGAGCAG  100

seq1  GCGAGGCACTCAAGCCTCACCGACTCCTGGGAACAGGCAGTAAGTACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGCACTCAAGCCTCACCGACTCCTGGGAACAGGCAGTAAGTACCAT  150

seq1  GGCTCAGCTGTAGCAGAAAGCTGTCATGGTGACTGAAGAGTCCAAGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCTGTAGCAGAAAGCTGTCATGGTGACTGAAGAGTCCAAGGTCA  200

seq1  GGGACTTGGAGAGCACAGTAAACCCACACCACACTGTCACTCAAGTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTGGAGAGCACAGTAAACCCACACCACACTGTCACTCAAGTATTT  250

seq1  GCTGTTCAGGGTTGTTTGTTTGTTTGTTTTGCTATTTTGGGACAGGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCAGGGTTGTTTGTTTGTTTGTTTTGCTATTTTGGGACAGGGTCT  300

seq1  TTCTACATAGCTCTGGCTGTCCTCGAACACAGAGATCTTTCTCCCTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATAGCTCTGGCTGTCCTCGAACACAGAGATCTTTCTCCCTCTAC  350

seq1  CTCCTGGGTGCTGGGAGATTAAAGGCATGCATGGCTTGCTAACCATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGTGCTGGGAGATTAAAGGCATGCATGGCTTGCTAACCATTTCT  400

seq1  TTCTTTTCTTTTGCTGAATTCTGGGGTATTTATTGACAATCTTTAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTTTGCTGAATTCTGGGGTATTTATTGACAATCTTTAAATAT  450

seq1  CATTCAAACCTAGCAGTAAAGCAGTCAGCTCTGAGGATGATACACACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAACCTAGCAGTAAAGCAGTCAGCTCTGAGGATGATACACACTGT  500

seq1  AGACAACAAACACATCCAAAGTCCACGGCACAGAAGTGTGCGCTTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACAAACACATCCAAAGTCCACGGCACAGAAGTGTGCGCTTTTAAA  550

seq1  GTAAAGGTTTTTATTTTGTATCCCTAAGTTTGCTGTGGTATAAGATGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGTTTTTATTTTGTATCCCTAAGTTTGCTGTGGTATAAGATGAAG  600

seq1  AATTAAACACCACAAGTAATATTAGTGTGACACTTGTGAAGGTTGAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAACACCACAAGTAATATTAGTGTGACACTTGTGAAGGTTGAAAGC  650

seq1  ACAGTGTCAGGAACCAGCAATAACACACAGGTCAACACTCTAACCGCGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCAGGAACCAGCAATAACACACAGGTCAACACTCTAACCGCGAC  700

seq1  AGCAGGTCAACAGTTCCCACTGACTGATCTACTAAGCAGGGAATGATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCAACAGTTCCCACTGACTGATCTACTAAGCAGGGAATGATTCT  750

seq1  TTTCTTTATATTGTAATGAAACTTCAAAGAAGACACCCTGCAGCCAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATATTGTAATGAAACTTCAAAGAAGACACCCTGCAGCCAGTCT  800

seq1  ATATAACTTTAGAAATCTGGCCTGTAAAATTTAAGGAACAAATAAGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTTTAGAAATCTGGCCTGTAAAATTTAAGGAACAAATAAGTTCA  850

seq1  GGTACATTAAAATTCAAGATTATATGAAATCCCATTTGATCAAAACCAAA  900
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACATTAAAATTCAAGATTATATGAAATCCCATTTGATCAAAACCAAA  900

seq1  CCCATTTCACTTCTATCTTACTTAAGACATTTCCTGAAAAGTCTGTAAGA  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCATTTCACTTCTATCTTACTTAAGACATTTCCTGAAAAGTCTGT-AGA  949

seq1  ATAAAGTAAATAATTCTTACTAATACCATTTCGGTTAAGATTAGCTAAAC  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAAGTAAATAATTCTTACTAATACCATTTCGGTTAAGATTAGCT-AAC  998

seq1  CTTCAATATCATCTGACTGAAAAAGATGGCCCCACCTTCCTGAGCTGTCT  1050
      | || |||||||||||||| ||||||||||||| || |||||||||||||
seq2  CCTCCATATCATCTGACTG-AAAAGATGGCCCC-CCCTCCTGAGCTGTCT  1046

seq1  GTATGGAACTATGGGGCAAGCACATCTGTAGTGAGATACAGACCCCGGTG  1100
      |||||| |||||||||| |||||||||||| |||| | |||||||| |||
seq2  GTATGG-ACTATGGGGC-AGCACATCTGTATTGAG-TTCAGACCCC-GTG  1092

seq1  TCCTTATCAACAGCACTAAAGCATCAGATCAGGCCCGGGCTCACATTCTT  1150
      | |||||  ||||||||||||||||||||||||||  ||||| || ||| 
seq2  T-CTTAT--ACAGCACTAAAGCATCAGATCAGGCC--GGCTC-CA-TCT-  1134

seq1  CCCAGCACCCAACTCTGTGCTAGCT  1175
       ||||||||| |||  |||||||||
seq2  -CCAGCACCC-ACT-AGTGCTAGCT  1156