BAC Information

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BAC

Clone NameB6Ng01-081A10
Chromosome3 (Build37)15 (Build37)
Map Location 79,442,451 - 79,442,99130,541,107 - 30,541,390
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik
Downstream geneRxfp1, Tmem144, 1110032E23Rik, EG626797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081A10.bB6Ng01-081A10.g
ACCDH895996DH895997
length996284
definitionDH895996|Mus musculus domesticus DNA, BAC clone: B6Ng01-081A10, 5' end.DH895997|Mus musculus domesticus DNA, BAC clone: B6Ng01-081A10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(79,442,451 - 79,442,991)(30,541,107 - 30,541,390)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaatttgctccttctaattcgttgaagaattgagttggatttt
taatggggattgcattgaatctgtagattgctttttggcaagatagccat
ttttacatgttggtcctgccaatccatgagcatgggagatctttccatct
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatcttttcactccttcgtagagtcacgccgagatatcttatatattt
gtggctatgagaagggtgttgttaccctaattcttctcaacctgtt
tctgcattgggaagctgggtgaccactactgtggtttagagtaggggtgg
ataagagtagttgctatttgctaatggctgtgatgcccccagcaaggtat
tccaagtgttacccctctacgtctcagcgaaaatacctccgtactccgtg
agtaaacagaaggttaaactcgtgttttcttgtttcctgtgactgtgtat
gagtctgagtaaatcttgattctggagggtgtgtgtgcctttgtatatga
agctatgaaggggtgatgtgtgtgtgtggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79442451_79442991
seq2: B6Ng01-081A10.b_509_1044 (reverse)

seq1  AACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGCCACA  50
      |||||| ||||||   |||||||| ||||||||||||||| |||||||||
seq2  AACAGGTTGAGAA--GAATTAGGGTAACAACACCCTTCTC-ATAGCCACA  47

seq1  AATAATATAAAATATCTCGGCGTGACTCTAACGAAGGAAGTG-AAAGATC  99
      ||| |||||| |||||||||||||||||| ||||||| |||| |||||||
seq2  AAT-ATATAAGATATCTCGGCGTGACTCT-ACGAAGG-AGTGAAAAGATC  94

seq1  TGTATGATAAAAACTTCAAGTCCCTGAAGAAAGAAATTAAAGAAGATCTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATAAAAACTTCAAGTCCCTGAAGAAAGAAATTAAAGAAGATCTC  144

seq1  AGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAACATTGT  199
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AG-AGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAACA-TGT  192

seq1  AAAAATGGCTATCTTGCC-AAAAGCAATCTACAGATTCAATGCAATCCCC  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAAATGGCTATCTTGCCAAAAAGCAATCTACAGATTCAATGCAATCCCC  242

seq1  ATTAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGC-AATTTGCA  297
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTAAAAATCCAACTCAATTCTTCAACGAATTAGAAGGAGCAAATTTGCA  292

seq1  AATTCATCTGGAATAACAAAAAACCGAGGATAGCAAAAACTCTTCTCAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATCTGGAATAACAAAAAACCGAGGATAGCAAAAACTCTTCTCAAG  342

seq1  GATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTA  392

seq1  CAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAG  442

seq1  TGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTAT  492

seq1  GGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAA  541
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAA  536

seq1: chr15_30541107_30541390
seq2: B6Ng01-081A10.g_77_360 (reverse)

seq1  CCCCCCCACACACACACATCACCCCTTCATAGCTTCATATACAAAGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCACACACACACATCACCCCTTCATAGCTTCATATACAAAGGCAC  50

seq1  ACACACCCTCCAGAATCAAGATTTACTCAGACTCATACACAGTCACAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCTCCAGAATCAAGATTTACTCAGACTCATACACAGTCACAGGA  100

seq1  AACAAGAAAACACGAGTTTAACCTTCTGTTTACTCACGGAGTACGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAAACACGAGTTTAACCTTCTGTTTACTCACGGAGTACGGAGGT  150

seq1  ATTTTCGCTGAGACGTAGAGGGGTAACACTTGGAATACCTTGCTGGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCGCTGAGACGTAGAGGGGTAACACTTGGAATACCTTGCTGGGGGC  200

seq1  ATCACAGCCATTAGCAAATAGCAACTACTCTTATCCACCCCTACTCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCCATTAGCAAATAGCAACTACTCTTATCCACCCCTACTCTAAA  250

seq1  CCACAGTAGTGGTCACCCAGCTTCCCAATGCAGA  284
      ||||||||||||||||||||||||||||||||||
seq2  CCACAGTAGTGGTCACCCAGCTTCCCAATGCAGA  284