BAC Information

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BAC

Clone NameB6Ng01-081E19
Chromosome15 (Build37)3 (Build37)
Map Location 93,861,659 - 93,861,77026,967,110 - 26,968,150
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081E19.bB6Ng01-081E19.g
ACCDH896194DH896195
length4421,040
definitionDH896194|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E19, 5' end.DH896195|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(93,861,659 - 93,861,770)(26,967,110 - 26,968,150)
sequence
gaattctcaacagaggaaacacgaatggctgaaaatcacttaaagaaatg
ctcaaaatctttagtcatcagaggaatgccaatcaaaacaactctgaaac
tccatcttacaccagtcagattggctaagatcaaaagctgaagcaatagc
acatgctggcaaggatgtggaacagggggaacactcctccattgctagta
gagtgcaaacttgtaaaaccactctggaaatcaatctggtgatttctcag
aaaattggaaatttgaaaattggaaatttgaaaatttctcagaaaattgg
aaatttgaaaattgaagacccagctataccactcctgggaatatacccaa
aagatgttgcaccagatcataagggcacatgctccactatgttcatagca
gctttatagccagaaactagaaacaacccagatgtccctcaa
caaaagcacagactgagaaatgtaagcacacaaaaatattttttttcaag
tctttcctgactgaatgaaaatgcaagtgaccaactaggatgaactactg
tgacagacatattttctaaatagatgtctacagggcttgtagagatagag
agacaaagaccaagacttcatagtcaaaggtatgtgggtgaagactacca
acaagcacaaagtacaaaataatgtcagcataagaaaaatgttcaaattc
acttacaagttttcatcagatgctgaagctaggaagcaggtactgatctg
tcagtgatgctgtgaggacagacatttcctcctaagtttctggtaggagt
tcataagagttccactgtgttactttctcttcttgttgctgtgagaagat
acctgactaaaatggaggatggacagacaggcagacagacagaaggaggg
aaggaaggaaggttttgttttgtcttatagtttaaagagacacagtccat
cattatggtacagaggcatagctgttggagcataaaataactggtcacgt
tatgtcaggaagcagagaaataaatattgaattgatattcagcttccctt
ttttttttgcttgttaatatcagtaccccagcttatgtgattgttttgtt
catattcagggtcatgctccatattttgccaaatcttcctggatacactc
tgtagacacactcagaggtgtttccacgtgtctctaaatccagtcaagtt
gacagtggagatgattaaccactgggaagcaagttggtcagacgtaacac
aaggtatattcacctgcatgttaatttttggtatctactcagaagacttt
ctcaaagcacaataatagttgagtgaagttatgtgtcccagcatcatttg
taattgtaaggcattaggagctactaaactccgatgcatagactgtagtc
gaatagcttcaatgcatacaaaggggtgccacgtttctgttgagaagaat
tatgaagaccacaatgaacggagggaaatgtatgcaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93861659_93861770
seq2: B6Ng01-081E19.b_374_485 (reverse)

seq1  TTGAGGGACATCTCAGTTGTTTCCCGTTTCTGGCTATTACAAATAAAGCT  50
      |||||||||||||  ||||||||  ||||||||||       ||||||||
seq2  TTGAGGGACATCTGGGTTGTTTCTAGTTTCTGGCT-------ATAAAGCT  43

seq1  GCTATGAAAATA----AGCAAATTTCCTT---GTATGGTGGAGCATCTTT  93
      |||||||| |||    ||||  |  ||||    | ||||| | |||||||
seq2  GCTATGAACATAGTGGAGCATGTGCCCTTATGATCTGGTGCAACATCTTT  93

seq1  TGGGTATATGCCCAGGAGT  112
      ||||||||| |||||||||
seq2  TGGGTATATTCCCAGGAGT  112

seq1: chr3_26967110_26968150
seq2: B6Ng01-081E19.g_81_1120 (reverse)

seq1  AGATTGC-TTCATCTCCCTCCGTTCATTGTGGTCTTCATAATTCTTCTTC  49
      ||||||| | ||| ||||||||||||||||||||||||||||||||||  
seq2  AGATTGCATACATTTCCCTCCGTTCATTGTGGTCTTCATAATTCTTCTCA  50

seq1  ACAGGAACGTGGCACCCCTTTGTATGCATTGGAAGCTATTCGACTACAGT  99
      |||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACAGAAACGTGGCACCCCTTTGTATGCATT-GAAGCTATTCGACTACAGT  99

seq1  CCTATGCATCGGAGTTTAGTAGCTCCTAATGCCTTACAATTACAAATGAT  149
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTATGCATCGGAGTTTAGTAGCTCCTAATGCCTTACAATTACAAATGAT  148

seq1  GCTGGGACACATAACTTCACTCAACTATTATTGTGCTTTGAGAAAGTCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGACACATAACTTCACTCAACTATTATTGTGCTTTGAGAAAGTCTT  198

seq1  CTGAGTAGATACCAAAAATTAACATGCAGGTGAATATACCTTGTGTTACG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAGATACCAAAAATTAACATGCAGGTGAATATACCTTGTGTTACG  248

seq1  TCTGACCAACTTGCTTCCCAGTGGTTAATCATCTCCACTGTCAACTTGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCAACTTGCTTCCCAGTGGTTAATCATCTCCACTGTCAACTTGAC  298

seq1  TGGATTTAGAGACACGTGGAAACACCTCTGAGTGTGTCTACAGAGTGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTAGAGACACGTGGAAACACCTCTGAGTGTGTCTACAGAGTGTAT  348

seq1  CCAGGAAGATTTGGCAAAATATGGAGCATGACCCTGAATATGAACAAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGATTTGGCAAAATATGGAGCATGACCCTGAATATGAACAAAAC  398

seq1  AATCACATAAGCTGGGGTACTGATATTAACAAGCAAAAAAAAAAGGGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACATAAGCTGGGGTACTGATATTAACAAGCAAAAAAAAAAGGGAAG  448

seq1  CTGAATATCAATTCAATATTTATTTCTCTGCTTCCTGACATAACGTGACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATCAATTCAATATTTATTTCTCTGCTTCCTGACATAACGTGACC  498

seq1  AGTTATTTTATGCTCCAACAGCTATGCCTCTGTACCATAATGATGGACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTTATGCTCCAACAGCTATGCCTCTGTACCATAATGATGGACTG  548

seq1  TGTCTCTTTAAACTATAAGACAAAACAAAACCTTCCTTCCTTCCCTCCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTAAACTATAAGACAAAACAAAACCTTCCTTCCTTCCCTCCTT  598

seq1  CTGTCTGTCTGCCTGTCTGTCCATCCTCCATTTTAGTCAGGTATCTTCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGCCTGTCTGTCCATCCTCCATTTTAGTCAGGTATCTTCTC  648

seq1  ACAGCAACAAGAAGAGAAAGTAACACAGTGGAACTCTTATGAACTCCTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACAAGAAGAGAAAGTAACACAGTGGAACTCTTATGAACTCCTAC  698

seq1  CAGAAACTTAGGAGGAAATGTCTGTCCTCACAGCATCACTGACAGATCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACTTAGGAGGAAATGTCTGTCCTCACAGCATCACTGACAGATCAG  748

seq1  TACCTGCTTCCTAGCTTCAGCATCTGATGAAAACTTGTAAGTGAATTTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTTCCTAGCTTCAGCATCTGATGAAAACTTGTAAGTGAATTTGA  798

seq1  ACATTTTTCTTATGCTGACATTATTTTGTACTTTGTGCTTGTTGGTAGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTCTTATGCTGACATTATTTTGTACTTTGTGCTTGTTGGTAGTC  848

seq1  TTCACCCACATACCTTTGACTATGAAGTCTTGGTCTTTGTCTCTCTATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCACATACCTTTGACTATGAAGTCTTGGTCTTTGTCTCTCTATCT  898

seq1  CTACAAGCCCTGTAGACATCTATTTAGAAAATATGTCTGTCACAGTAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGCCCTGTAGACATCTATTTAGAAAATATGTCTGTCACAGTAGTT  948

seq1  CATCCTAGTTGGTCACTTGCATTTTCATTCAGTCAGGAAAGACTTGAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAGTTGGTCACTTGCATTTTCATTCAGTCAGGAAAGACTTGAAAA  998

seq1  AAAATATTTTTGTGTGCTTACATTTCTCAGTCTGTGCTTTTG  1041
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTTGTGTGCTTACATTTCTCAGTCTGTGCTTTTG  1040