BAC Information

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BAC

Clone NameB6Ng01-082K23
Chromosome7 (Build37)3 (Build37)
Map Location 82,390,021 - 82,391,177100,220,465 - 100,220,693
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik, Sv2b
Downstream gene1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210, LOC434200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082K23.bB6Ng01-082K23.g
ACCDH897168DH897169
length1,149410
definitionDH897168|Mus musculus domesticus DNA, BAC clone: B6Ng01-082K23, 5' end.DH897169|Mus musculus domesticus DNA, BAC clone: B6Ng01-082K23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(82,390,021 - 82,391,177)(100,220,465 - 100,220,693)
sequence
gaattcaaataggcgagccaagaagaggactgtttccccgtgattaattt
acagcgaaggcaggttccagcatggaaagctgctctctagcttagaaatc
tcccaaggcctgatccattggccatccatctaactgtcgctgtaaggaac
actagcacacttcaaaacccagcactacatttgcgcctcacattaaagcc
gctgcacagcaggggctcaactaatatttgctgaacttgtgtgtacacac
atcgatatgcatgaattttaaaagctaactcaagaaacccaaaatggggc
agctttcatttccagtctctgaaataagattctgaaattggctttcattc
atgaagtttacctgaggtcactgctcaggacagggtcatgaacttgatct
ccctgaaagccagggagctcgtgggattctgaggcccccacattctgcag
ctggtcaaccccatcagctctcaaaggtatgtcagtgccaagaacagcat
ctctgtggcatcagccctgaagcaaacgcagaggaaacaattccaaaggt
ctattctgtatccaagcacccgtgtgactccttgattgtaagaatttcga
ctaagatttcttttcctgctacttgtaaaaaatgtcactcatgaggggaa
caaagtcacaagtctgctggatactaggtgaccccaagccaagctcagat
gccagaacagtcatgttcccagctcctgtagcattgtggcaaggaaggag
agaccagctatgaatatccaccatcacggagtgcatattccaagaacaag
atggacattacaaatacacagtccattaaaagcaatggggaatgaaccac
ttggagtgggtttacttaatctgtgtttttggatatgttcctagtaaagt
atcctttgacttgagatacctcagtgatcaataattagaaaatagttaag
atcaccataaaatttgactacatacaaatcagattaagtaatctagctaa
tcatgggacccctcccttcacttgagttcttcagtgattcccttgcctct
ctgttgttccgctgtcacatacctgtaggagtcagtattggggcagaaaa
tcctttaccttagttaaggatactcaataagggtagtttggataggagc
tggtagctgggagccgaggaataccacaaagtcacagtgcagcaaccctc
tcacaggagatttgttgggagagacacatcctgggagagtggctgcctct
gctcaagtgagaagcagcagggagctgagcaggaggcaggctttatatag
ggccctatataaagccttgggggtagggtggagttttccagggtggggat
tggtgggatttcaagacaagcccagggattggtggaacttggagctcagg
aattggtgggtttgggtaggttttcaaaaatgttcagaccttttacccta
tgatatctctcctctagcaatatgtatgttctgtatcctatatatctata
acctataccctatatgtctataacctataccctatatgtctataacctat
atcctatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82390021_82391177
seq2: B6Ng01-082K23.b_50_1198

seq1  GAATTCAAATAGGCGAGCCAAGAAGAGGACTGTTTCCCCGTGATTAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAGGCGAGCCAAGAAGAGGACTGTTTCCCCGTGATTAATTT  50

seq1  ACAGCGAAGGCAGGTTCCAGCATGGAAAGCTGCTCTCTAGCTTAGAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGAAGGCAGGTTCCAGCATGGAAAGCTGCTCTCTAGCTTAGAAATC  100

seq1  TCCCAAGGCCTGATCCATTGGCCATCCATCTAACTGTCGCTGTAAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGCCTGATCCATTGGCCATCCATCTAACTGTCGCTGTAAGGAAC  150

seq1  ACTAGCACACTTCAAAACCCAGCACTACATTTGCGCCTCACATTAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCACACTTCAAAACCCAGCACTACATTTGCGCCTCACATTAAAGCC  200

seq1  GCTGCACAGCAGGGGCTCAACTAATATTTGCTGAACTTGTGTGTACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACAGCAGGGGCTCAACTAATATTTGCTGAACTTGTGTGTACACAC  250

seq1  ATCGATATGCATGAATTTTAAAAGCTAACTCAAGAAACCCAAAATGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATATGCATGAATTTTAAAAGCTAACTCAAGAAACCCAAAATGGGGC  300

seq1  AGCTTTCATTTCCAGTCTCTGAAATAAGATTCTGAAATTGGCTTTCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCATTTCCAGTCTCTGAAATAAGATTCTGAAATTGGCTTTCATTC  350

seq1  ATGAAGTTTACCTGAGGTCACTGCTCAGGACAGGGTCATGAACTTGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTTACCTGAGGTCACTGCTCAGGACAGGGTCATGAACTTGATCT  400

seq1  CCCTGAAAGCCAGGGAGCTCGTGGGATTCTGAGGCCCCCACATTCTGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAAGCCAGGGAGCTCGTGGGATTCTGAGGCCCCCACATTCTGCAG  450

seq1  CTGGTCAACCCCATCAGCTCTCAAAGGTATGTCAGTGCCAAGAACAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAACCCCATCAGCTCTCAAAGGTATGTCAGTGCCAAGAACAGCAT  500

seq1  CTCTGTGGCATCAGCCCTGAAGCAAACGCAGAGGAAACAATTCCAAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGCATCAGCCCTGAAGCAAACGCAGAGGAAACAATTCCAAAGGT  550

seq1  CTATTCTGTATCCAAGCACCCGTGTGACTCCTTGATTGTAAGAATTTCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTGTATCCAAGCACCCGTGTGACTCCTTGATTGTAAGAATTTCGA  600

seq1  CTAAGATTTCTTTTCCTGCTACTTGTAAAAAATGTCACTCATGAGGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTTCTTTTCCTGCTACTTGTAAAAAATGTCACTCATGAGGGGAA  650

seq1  CAAAGTCACAAGTCTGCTGGATACTAGGTGACCCCAAGCCAAGCTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCACAAGTCTGCTGGATACTAGGTGACCCCAAGCCAAGCTCAGAT  700

seq1  GCCAGAACAGTCATGTTCCCAGCTCCTGTAGCATTGTGGCAAGGAAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACAGTCATGTTCCCAGCTCCTGTAGCATTGTGGCAAGGAAGGAG  750

seq1  AGACCAGCTATGAATATCCACCATCACGGAGTGCATATTCCAAGAACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGCTATGAATATCCACCATCACGGAGTGCATATTCCAAGAACAAG  800

seq1  ATGGACATTACAAATACACAGTCCATTAAAAGCAATGGGGAATGAACCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACATTACAAATACACAGTCCATTAAAAGCAATGGGGAATGAACCAC  850

seq1  TTGGAGTGGGTTTACTTAATCTGTGTTTTTGGATATGTTCCTAGTAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTGGGTTTACTTAATCTGTGTTTTTGGATATGTTCCTAGTAAAGT  900

seq1  ATCCTTTGACTTGAGATACCTCAGTGATCAATAATTAGAAAATAGTTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGACTTGAGATACCTCAGTGATCAATAATTAGAAAATAGTTAAG  950

seq1  ATCACCATAAAATTTGACTACATACAAATCAGGATTAAGTAATCTAGCTA  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCACCATAAAATTTGACTACATACAAATCA-GATTAAGTAATCTAGCTA  999

seq1  ATCATGGGACCACTCCCTTCACTTGAGTTCTTCAGGTGATTCCCTTTGCC  1050
      ||||||||||| |||||||||||||||||||||| ||||||||| |||||
seq2  ATCATGGGACCCCTCCCTTCACTTGAGTTCTTCA-GTGATTCCC-TTGCC  1047

seq1  TCTCTGTTG-TCCGCTGTCACAATACCCTGTAGGGAGTCAGTTATTGGGC  1099
      ||||||||| ||||||||||| ||| |||||| |||||||||  | ||||
seq2  TCTCTGTTGTTCCGCTGTCAC-ATA-CCTGTA-GGAGTCAGTATTGGGGC  1094

seq1  AGAAAATCCTTTAACCTTAGTTATAAAGATACTAATAAAGAGTAGTTTGG  1149
      |||||||||||| ||||||||  ||| |||||| |  ||| |||||||||
seq2  AGAAAATCCTTT-ACCTTAGT--TAAGGATACTCAATAAGGGTAGTTTGG  1141

seq1  ATAGGAGC  1157
      ||||||||
seq2  ATAGGAGC  1149

seq1: chr3_100220465_100220693
seq2: B6Ng01-082K23.g_81_285 (reverse)

seq1  GAAATCCCACCAATCCCTGGGCTCACTCCAAGCTCATGACTTGAAATCTC  50
      |||||||||||||||||      |||             || |||| |||
seq2  GAAATCCCACCAATCCC------CAC------------CCTGGAAAACTC  32

seq1  ATCAGTCCCATTCAGGAAATCTTCATTCTGGAAAACTCCTCCCCA-AGAA  99
        |  | ||    |||    ||| ||   ||         ||| | | ||
seq2  CACCCTACCCCCAAGG----CTTTATATAGG--------GCCCTATATAA  70

seq1  ACCCTATATAAGCCT--GTTCCCTGAGGCTTCTCGCCCAAGCAGAGGCAG  147
      | |||   |    ||  | ||||||  ||||||| |   |||||||||||
seq2  AGCCTGCCTCCTGCTCAGCTCCCTGCTGCTTCTCACTTGAGCAGAGGCAG  120

seq1  CTACCCTC-----TTGTGTCTCCCCCAGTAAATCTCTTGGGTGAGGTTTG  192
      | || |||      |||||||| ||||  ||||||| || | |||| |||
seq2  CCACTCTCCCAGGATGTGTCTCTCCCAACAAATCTCCTGTGAGAGGGTTG  170

seq1  TTGTGTGGTGTGACTTGGTGGTATTCCTCGGCTCCCA  229
         ||   |||||||| ||||||||||||||||||||
seq2  --CTGCACTGTGACTTTGTGGTATTCCTCGGCTCCCA  205