BAC Information

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BAC

Clone NameB6Ng01-082P08
Chromosome3 (Build37)
Map Location 105,895,321 - 105,896,236
singlet/doubletsinglet
Overlap genenone
Upstream gene1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129
Downstream geneChia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082P08.bB6Ng01-082P08.g
ACCDH897357DH897358
length9621,164
definitionDH897357|Mus musculus domesticus DNA, BAC clone: B6Ng01-082P08, 5' end.DH897358|Mus musculus domesticus DNA, BAC clone: B6Ng01-082P08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgttgcattactattttccttctgatagagataactcaaac
tgttagttgtcatattaaatatcattatattgccttgtatcattcaacac
tcattatgagaggcacagatctttaaagtgtgtgcatatataaatggagg
agccactctcttgtacatatagctatttaatagttattttaacaactttt
aggaatagatgctgggaagtgaaaataaaatctgagccatagactcagta
tgtgcaaaaagttttgcctatagcgaaaggtaacaggaatgaagaagctt
actgtaacatgcaggcagaaaaattgggttttcataaatccctttaagac
aagagaaaacaagaaaacagacaaatttagacatgtccagctttagacag
gcattctgattgttaaagttttatctacaaagtgttgataaataactggt
tagcctagtactcactacttaaacctagctaacctggacccttgcctagg
ccttcaaagctcaggaattacaaaaatgagataaaatgccagagatttta
gtccaactgaagattaaaaacccatgtgtaaatattctacaattattact
tgtagaattattattaatgtcttgattctttacaaacactttgtttaatt
cttcccccctcccccccaaaacagctttattaaagatacttttctttttt
ttttcttttttttttttccattttttattaggtatttaactcatttacat
ttccaatgctataccaaaagtcccccatatccacccacccccactcccct
gcccacccactccccctttttggccctggtattcccctgtactggggcat
ataaagtttgcaagtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatatatatgcagctagagtcaagagctccggggtactgg
ttagctcatatg
gaattccacataaaaacagagacactgaaacttagagaggagaagttggg
ggagagccttgaagatataggcacaggggaaaatttcctgaacagaccag
caaaggcttgtgctgtaagatcaagaatcgactaatgggacctcataaaa
ttgcaaagcttccgtaaggcaaaagacactgtcaataagacagaaaggcc
accaacagattgggaaaagatctttaccaatcctacatctgattgagggc
taatatccaatatatacaatatatacaaagaactcaagaagttaagactc
cagacaaccaaataaccctattaaaaatggggcacagggctaaacaaaga
attctcaactgaggaataacgaatggctgagaggcacctaaaaaatgctc
aatatccttagtcattagggaaatgcaaatcaaaacaaacctgagattcc
acctcataccagtcagaatggctaagatcaaaaactcaggtgacagcaga
tgctggcgaggatgtgaagaaagagcaacaatactccatttctgggtgat
tgcaagctggtacaaccactctggaaatcagtttggcagttcctcagaaa
attggacatagtactactggaagatccagcaatactacccagaagatgct
ccaacatgtaataaggacacatgctccactatgttcatagcagccttatt
tgtaatagccagaagctggaaagaacccagatgtccctcaatagaggaat
ggatacagaaaatgtggtccatttacacaatggagtactattcagctatt
aaaagcaatgaatttatgaaattctagggcaaatggatagatctggagga
tatcatcctgactgaggtaacccaattcacaaaaggacacacatgatttg
cactcactgataagtggatattactccagagctcagatatccaggataca
tttgcaaacacatgaaactcagaaggagacaaggtgttggatactcaatc
tctagaagggggagacaaatacccatggatgagtacagagaacaagtccg
gagcagaactgaggacggtcattcggaactgcccacctgggatcatctat
aagacccaattccgaacaattgggggatgcatagggctgcctgacaggac
tggatctaactgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_105895321_105896236
seq2: B6Ng01-082P08.b_85_1000 (reverse)

seq1  AGCTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAA  50

seq1  GATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAA  100

seq1  CTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGG  150

seq1  GTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCA  200

seq1  TTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGGAAAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGGAAAAAAAAAAA  250

seq1  AGAAAAAAAAAAGAAAAGTATCTTTAATAAAGCTGTTTTGGGGGGGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAAAAGAAAAGTATCTTTAATAAAGCTGTTTTGGGGGGGAGGG  300

seq1  GGGAAGAATTAAACAAAGTGTTTGTAAAGAATCAAGACATTAATAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAATTAAACAAAGTGTTTGTAAAGAATCAAGACATTAATAATAAT  350

seq1  TCTACAAGTAATAATTGTAGAATATTTACACATGGGTTTTTAATCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAGTAATAATTGTAGAATATTTACACATGGGTTTTTAATCTTCAG  400

seq1  TTGGACTAAAATCTCTGGCATTTTATCTCATTTTTGTAATTCCTGAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTAAAATCTCTGGCATTTTATCTCATTTTTGTAATTCCTGAGCTT  450

seq1  TGAAGGCCTAGGCAAGGGTCCAGGTTAGCTAGGTTTAAGTAGTGAGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCCTAGGCAAGGGTCCAGGTTAGCTAGGTTTAAGTAGTGAGTACT  500

seq1  AGGCTAACCAGTTATTTATCAACACTTTGTAGATAAAACTTTAACAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACCAGTTATTTATCAACACTTTGTAGATAAAACTTTAACAATCA  550

seq1  GAATGCCTGTCTAAAGCTGGACATGTCTAAATTTGTCTGTTTTCTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCTGTCTAAAGCTGGACATGTCTAAATTTGTCTGTTTTCTTGTTT  600

seq1  TCTCTTGTCTTAAAGGGATTTATGAAAACCCAATTTTTCTGCCTGCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTCTTAAAGGGATTTATGAAAACCCAATTTTTCTGCCTGCATGT  650

seq1  TACAGTAAGCTTCTTCATTCCTGTTACCTTTCGCTATAGGCAAAACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAGCTTCTTCATTCCTGTTACCTTTCGCTATAGGCAAAACTTTT  700

seq1  TGCACATACTGAGTCTATGGCTCAGATTTTATTTTCACTTCCCAGCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATACTGAGTCTATGGCTCAGATTTTATTTTCACTTCCCAGCATCT  750

seq1  ATTCCTAAAAGTTGTTAAAATAACTATTAAATAGCTATATGTACAAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAAAAGTTGTTAAAATAACTATTAAATAGCTATATGTACAAGAGA  800

seq1  GTGGCTCCTCCATTTATATATGCACACACTTTAAAGATCTGTGCCTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCCTCCATTTATATATGCACACACTTTAAAGATCTGTGCCTCTCA  850

seq1  TAATGAGTGTTGAATGATACAAGGCAATATAATGATATTTAATATGACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTGTTGAATGATACAAGGCAATATAATGATATTTAATATGACAA  900

seq1  CTAACAGTTTGAGTTA  916
      ||||||||||||||||
seq2  CTAACAGTTTGAGTTA  916