BAC Information

Click to search

BAC

Clone NameB6Ng01-083A02
Chromosome3 (Build37)
Map Location 74,660,051 - 74,795,133
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667425, LOC619764, LOC667434, LOC100041551, EG667459
Downstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1, Golph4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083A02.bB6Ng01-083A02.g
ACCDH897390DH897391
length1,0601,069
definitionDH897390|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A02, 5' end.DH897391|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,794,072 - 74,795,133)(74,660,051 - 74,661,145)
sequence
gaattcatatagatttgtagtacttgtagtgaaatatggctattggcaga
gactcactaatattttatacatctatacctgtaaaaacatcttattgtat
ggttattgctacaagcattctactgttagaagcattgtgatagaatccac
acatgtagttttctaggctatatgtgttcaatctcatcatgtgtatgcat
ttctgtttatctatccataatcttccaggagtgagtttgccagcatacaa
tatcatatcattgtactcttccatgcccaggaactctactacttgactct
gctcactttcctctatagttgccatgatttgcatcataatggcagaaaat
agtcaacttcatgtccttggggtcagtgtagaatagatggaaaaaagtga
atcattcaaacaaatccaatgttttattctctctctctctctctctctct
ctctctctctctctctctctctctctctctttcttcctttctttctttct
ttcttcagggttctatattgaatggacagcctcatacataataagcaagt
agtctgtcattgggaacctctaagtgttgcagttgtgacatactttgctt
ttccctcagatgtccatcacaggactgaatcatactttttggagaaatga
cctgcccatgggtgttactgctcatgcttctttacctgtcttccatgctg
ccatatgttcttcaaggaagtgtttgctgaagagcaacatttcatcttag
tgtttccttttccattttttctttttttttctttcaaccttttctttatc
tccctcttcttctgcttctgttatgttttgagagaatctagcaaaatcaa
agtaaatatacagtttagattgttatgtacaatattattaaattactttt
tcagaaagctgacatctacatacatccttcccaacagactttattttcac
ttttgaaataaattaaagcctagccaatactcttgaatgcttgtgtgaca
aagataacttcttggaggtctgatagaaaccgagaatgttttgaagtttc
tatgtcatta
gaattctagtgattagacatcttcatgcacagataacagctttttcatca
cctgacatttagtatatcccagtaacaaatttagagaaaatatgaacacc
atcttcaaaatccctatttatttgaaacacaaactctttgaatcttaata
ctaagtatacattttttggtattatctccagctcatgtagggctttttca
gttctattgtctcctaaagtcaattgcttatcaaacaatatcttgatttc
tggaaaattaacttttacattgatattgttgaaggtaagaattaaattaa
attctgagatgttacaagtataacctacttttctacactatattttttga
cacaaaataacaaaaatagaaacaatatcttcattactagacgcaaataa
cattaatggcagcaatatcttcattactagtcaatattcaagaccatcca
cagtgcaccatgcccaaaacaattctacatgtgtcttcatcctacaaaaa
actagtttctagtagtattacaaatatatgcaatatatattctggtaaca
caataagtgaaactcatagagttttgatgtgtgtcagtcactgttagcag
ctttacacagataaaactcattaccccataaagttgatattataggtctt
tctccagttttcttttcaaattacactgtttgaggaacagttatattcaa
agtctgctattttctccacaatctctctaaataagcagagcgtgaagtag
aaactccaaacgtctctgcagtactaaacatgaatcacatgcagttctaa
aactgaaaggacaaatgataatggatatttattgtttagaatttaaaaaa
aaggaactcttccacatcactgtaaaatagtaatttattattgaggcttt
tcttttaaacctcataacattattttttaataagctacataaatctactt
atagtattagtatatacacaaaaatataaatcagtggtttaaatatattt
ttatcacacatagctataatagactcatctagtattcatactgataatat
agaaaagtgatcatgcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74794072_74795133
seq2: B6Ng01-083A02.b_46_1105 (reverse)

seq1  TAATGACATAGGTAACTTC-AAACAATCTCTGTTTCTATCAGACCTCCAA  49
      |||||||||| | |||||| ||||| |||| |||||||||||||||||||
seq2  TAATGACATA-GAAACTTCAAAACATTCTCGGTTTCTATCAGACCTCCAA  49

seq1  G-AGTTATCTTTGTCACAC-AGCATTCAAGAGTATTTGGCTAGGCTTTAA  97
      | ||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  GAAGTTATCTTTGTCACACAAGCATTCAAGAGTA-TTGGCTAGGCTTTAA  98

seq1  TTTAATTTTCAAAAGTGAAAATAAAAGTCTGTTGGGAAGGATGTATGTAG  147
      ||||  |||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTA--TTTCAAAAGTGAAAAT-AAAGTCTGTTGGGAAGGATGTATGTAG  145

seq1  ATGTCAGCTTTCTG-AAAAGTAATTTAATAATATTGTACATAACAATCTA  196
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGTCAGCTTTCTGAAAAAGTAATTTAATAATATTGTACATAACAATCTA  195

seq1  AACTGTATATTTACTTTGATTTTGCTTAGATTCTCTCAAAACATAACAGA  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACTGTATATTTACTTTGATTTTGC-TAGATTCTCTCAAAACATAACAGA  244

seq1  AGCAGAAGAAGAGGGAGATAAAGAAAAGGTTGAAAGAAAAAAAAAGAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGAAGAGGGAGATAAAGAAAAGGTTGAAAGAAAAAAAAAGAAAA  294

seq1  AATGGAAAAGGAAACACTAAGATGAAATGTTGCTCTTCAGCAAACACTTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAAGGAAACACTAAGATGAAATGTTGCTCTTCAGCAAACACTTC  344

seq1  CTTGAAGAACATATGGCAGCATGGAAGACAGGTAAAGAAGCATGAGCAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAACATATGGCAGCATGGAAGACAGGTAAAGAAGCATGAGCAGT  394

seq1  AACACCCATGGGCAGGTCATTTCTCCAAAAAGTATGATTCAGTCCTGTGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCATGGGCAGGTCATTTCTCCAAAAAGTATGATTCAGTCCTGTGA  444

seq1  TGGACATCTGAGGGAAAAGCAAAGTATGTCACAACTGCAACACTTAGAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATCTGAGGGAAAAGCAAAGTATGTCACAACTGCAACACTTAGAGG  494

seq1  TTCCCAATGACAGACTACTTGCTTATTATGTATGAGGCTGTCCATTCAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATGACAGACTACTTGCTTATTATGTATGAGGCTGTCCATTCAAT  544

seq1  ATAGAACCCTGAAGAAAGAAAGAAAGAAAGGAAGAAAGAGAGAGAGAGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACCCTGAAGAAAGAAAGAAAGAAAGGAAGAAAGAGAGAGAGAGAG  594

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAAAACATTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAAAACATTG  644

seq1  GATTTGTTTGAATGATTCACTTTTTTCCATCTATTCTACACTGACCCCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTTGAATGATTCACTTTTTTCCATCTATTCTACACTGACCCCAA  694

seq1  GGACATGAAGTTGACTATTTTCTGCCATTATGATGCAAATCATGGCAACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGAAGTTGACTATTTTCTGCCATTATGATGCAAATCATGGCAACT  744

seq1  ATAGAGGAAAGTGAGCAGAGTCAAGTAGTAGAGTTCCTGGGCATGGAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGAAAGTGAGCAGAGTCAAGTAGTAGAGTTCCTGGGCATGGAAGA  794

seq1  GTACAATGATATGATATTGTATGCTGGCAAACTCACTCCTGGAAGATTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATGATATGATATTGTATGCTGGCAAACTCACTCCTGGAAGATTAT  844

seq1  GGATAGATAAACAGAAATGCATACACATGATGAGATTGAACACATATAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATAAACAGAAATGCATACACATGATGAGATTGAACACATATAGC  894

seq1  CTAGAAAACTACATGTGTGGATTCTATCACAATGCTTCTAACAGTAGAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAACTACATGTGTGGATTCTATCACAATGCTTCTAACAGTAGAAT  944

seq1  GCTTGTAGCAATAACCATACAATAAGATGTTTTTACAGGTATAGATGTAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAGCAATAACCATACAATAAGATGTTTTTACAGGTATAGATGTAT  994

seq1  AAAATATTAGTGAGTCTCTGCCAATAGCCATATTTCACTACAAGTACTAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAGTGAGTCTCTGCCAATAGCCATATTTCACTACAAGTACTAC  1044

seq1  AAATCTATATGAATTC  1062
      ||||||||||||||||
seq2  AAATCTATATGAATTC  1060

seq1: chr3_74660051_74661145
seq2: B6Ng01-083A02.g_67_1135

seq1  GAATTCTAGTGATTAGACATCTTCATGCACAGATAACAGCTTTTTCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGATTAGACATCTTCATGCACAGATAACAGCTTTTTCATCA  50

seq1  CCTGACATTTAGTATATCCCAGTAACAAATTTAGAGAAAATATGAACACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATTTAGTATATCCCAGTAACAAATTTAGAGAAAATATGAACACC  100

seq1  ATCTTCAAAATCCCTATTTATTTGAAACACAAACTCTTTGAATCTTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAAAATCCCTATTTATTTGAAACACAAACTCTTTGAATCTTAATA  150

seq1  CTAAGTATACATTTTTTGGTATTATCTCCAGCTCATGTAGGGCTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATACATTTTTTGGTATTATCTCCAGCTCATGTAGGGCTTTTTCA  200

seq1  GTTCTATTGTCTCCTAAAGTCAATTGCTTATCAAACAATATCTTGATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATTGTCTCCTAAAGTCAATTGCTTATCAAACAATATCTTGATTTC  250

seq1  TGGAAAATTAACTTTTACATTGATATTGTTGAAGGTAAGAATTAAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATTAACTTTTACATTGATATTGTTGAAGGTAAGAATTAAATTAA  300

seq1  ATTCTGAGATGTTACAAGTATAACCTACTTTTCTACACTATATTTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGATGTTACAAGTATAACCTACTTTTCTACACTATATTTTTTGA  350

seq1  CACAAAATAACAAAAATAGAAACAATATCTTCATTACTAGACGCAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATAACAAAAATAGAAACAATATCTTCATTACTAGACGCAAATAA  400

seq1  CATTAATGGCAGCAATATCTTCATTACTAGTCAATATTCAAGACCATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATGGCAGCAATATCTTCATTACTAGTCAATATTCAAGACCATCCA  450

seq1  CAGTGCACCATGCCCAAAACAATTCTACATGTGTCTTCATCCTACAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACCATGCCCAAAACAATTCTACATGTGTCTTCATCCTACAAAAA  500

seq1  ACTAGTTTCTAGTAGTATTACAAATATATGCAATATATATTCTGGTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTCTAGTAGTATTACAAATATATGCAATATATATTCTGGTAACA  550

seq1  CAATAAGTGAAACTCATAGAGTTTTGATGTGTGTCAGTCACTGTTAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGTGAAACTCATAGAGTTTTGATGTGTGTCAGTCACTGTTAGCAG  600

seq1  CTTTACACAGATAAAACTCATTACCCCATAAAGTTGATATTATAGGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACAGATAAAACTCATTACCCCATAAAGTTGATATTATAGGTCTT  650

seq1  TCTCCAGTTTTCTTTTCAAATTACACTGTTTGAGGAACAGTTATATTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGTTTTCTTTTCAAATTACACTGTTTGAGGAACAGTTATATTCAA  700

seq1  AGTCTGCTATTTTCTCCACAATCTCTCTAAATAAGCAGAGCGTGAAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTATTTTCTCCACAATCTCTCTAAATAAGCAGAGCGTGAAGTAG  750

seq1  AAACTCCAAACGTCTCTGCAGTACTAAACATGAATCACATGCAGTTCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAAACGTCTCTGCAGTACTAAACATGAATCACATGCAGTTCTAA  800

seq1  AACTGAAAGGACAAATGATAATGGATATTTATTGTTTAGAATTTAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAGGACAAATGATAATGGATATTTATTGTTTAGAATTTAAAAAA  850

seq1  AAAGGAAACTCTTCCACATCACTGTAAAATAGTAAATTTATTATTGAGGC  900
      ||  | ||||||||||||||||||||||||||| ||||||||||||||||
seq2  AA--GGAACTCTTCCACATCACTGTAAAATAGT-AATTTATTATTGAGGC  897

seq1  TTTTCTTTTAAACCTCAATAACATTATTTTTTAAATAAAGCTAACATAAA  950
      |||||||||||||||| |||||||||||||||||   ||||| |||| ||
seq2  TTTTCTTTTAAACCTC-ATAACATTATTTTTTAA--TAAGCT-ACAT-AA  942

seq1  ATCTACTTATAGTATTAGTAATATACACAAAAATATAAAATCAGTGGTTT  1000
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  ATCTACTTATAGTATTAGT-ATATACACAAAAATAT-AAATCAGTGGTTT  990

seq1  AAATATATTTTTAATCACAACATTAGCTAATAAATAGACTCAATCTTAGT  1050
      |||||||||||| ||||| ||| ||||||   ||||||||| ||| ||||
seq2  AAATATATTTTT-ATCAC-ACA-TAGCTA--TAATAGACTC-ATC-TAGT  1033

seq1  ATTCATTAACTGATTATTAAATAAGGAAAAAGTGATTCATGCATC  1095
      ||||||  |||||| ||   |||    |||||||| |||||||||
seq2  ATTCAT--ACTGATAAT---ATA---GAAAAGTGA-TCATGCATC  1069