BAC Information

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BAC

Clone NameB6Ng01-083G06
Chromosome3 (Build37)
Map Location 40,819,942 - 40,820,912
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2
Downstream genePgrmc2, EG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083G06.bB6Ng01-083G06.g
ACCDH897668DH897669
length1,240972
definitionDH897668|Mus musculus domesticus DNA, BAC clone: B6Ng01-083G06, 5' end.DH897669|Mus musculus domesticus DNA, BAC clone: B6Ng01-083G06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgattcagagctactaagagctggctccttgagctcat
ctagtgatgagtataggctccttctcctagagacctccgctaattgatct
tttttcttttccttccttctaatcgctccccaggtattcttacctgacct
aaacttttcctcgggttcaagacccgtggaaaggcctgtatacttatttt
gtgcgccatatttcctctttgctcctactctctctccccgctttacttct
gatagattgccctgaatttcatccagaattttcagccctgccttaaccgc
ttgataacatgtgaaaaggaacaaaaaggctcctaacactagagaaagtt
caaggccaaacataccttgtaaagctatttcccactttacttctgataga
ctgtcttgaatttcgttagaaagttcaagaccagacttaccttgtaaagc
tatacttacgggtaccctgttccccagctgaagagttctgaattcacgca
gttgaatccttctcaacagtctgttttacgggaacacttcattaccaccg
ttccccagctgaggagttctgaatccaggctggatccttctcaacagtct
gttttacgggaacctttatgacccgcagttctggttccggaatgagggat
cttccttgcgcaggtgatggtaaccgtcccgggttttctcatcccaggat
ttcttgtcctgggttttctcgtcccgggtttcagcaccaactcttacacg
cgttcgcgcgaccggccaggaagaacgcagcaaaccagaatcttctgcgg
caaaagctttattgcttacatctttaggagcaagagcgcaagagagcaag
agagagaatggtgaaaccccgtcccttttagggagaattatcctccgcct
aggacgtgtcactccctgattggctgcagcccatcggccgagttgtcctc
acggggaaggcagagcacataggtggagaactacccttggcacatgcgca
gattattgtttacactatacacaggatgtcagcgcatctgtacggcgaat
gtggagggcggctccccacacagggctatacagagaatcctgtctcaaaa
aaaaaaattctagatgatgggctctaggaatggctgggatacacagaaaa
cagttctaggctaaaaaaagaaacggactacgacacaaacctgcattggt
gcggtagcagaagtttctgttccgaagaaatcatatttta
gaattctatagcagtgactggaagtgtccacagagaagggagaactaaga
gatattgccgaatgcactaagagagttgctaaagaaaggacgttggtaaa
ccaggcaaggatatcagaaggaaactcaaccaccagaaatggagagagag
caaaagaaatgtgtggacagacataatgttctgtgctctgtttaagctct
ctaaagcacctttaatagatgttcactacccagtgggcatttaattgtac
gaagatgtaaaagtaagactactgtgcaaaggaatccatgggaagggtgg
agagatggctcagcagttaagggcacttgctgcttttgtgagcaccaggt
tccactctcagcagccacatgggtggctccaaaagatctcatgttctctg
ccaccaacaggctgcagcacaacttgtgcacacacacatgcaggggaaac
actctcacacacacaattcttttaaaaagataaatctaaacaataggggg
agagtgagatggcttgatgtgtaaatgtatttgctgttcaaacctgacaa
ccgaagttcaacccctggaatccataaacaaaaacaaaacccagttatca
gcactgctaagatgaaatggatagagaccaaaaagctgtctagaagatgg
gaggtcaactaacctgcagctcagaggatggcagaagcaagggagatact
ttgtctcaaagggaggtgaagagaaccaattccccaaatgttgcaatttg
actaacctccctggtgcatcacggcatccatgtgactataaacacacatt
gcacatctctctcttctccctgtctgtctgtctgtctctctctccctccc
tctcccgatttctctccctctccgtctctctctctctctcacacacacac
acacataaacacacatatacacagagagacagagaaagacagggaggaag
agagagggggtaggtggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_40819942_40820912
seq2: B6Ng01-083G06.g_67_1038 (reverse)

seq1  CCCCACCA-CTACCCCCTCTCTCTTCCTCCCTGTCTTTCTCTGTCTCTCT  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCACCTACCCCCTCTCTCTTCCTCCCTGTCTTTCTCTGTCTCTCT  50

seq1  GTGTATATGTGTGTTTATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATGTGTGTTTATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACG  100

seq1  GAGAGGGAGAGAAATCGGGAGAGGGAGGGAGAGAGAGACAGACAGACAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGAGAAATCGGGAGAGGGAGGGAGAGAGAGACAGACAGACAGA  150

seq1  CAGGGAGAAGAGAGAGATGTGCAATGTGTGTTTATAGTCACATGGATGCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAAGAGAGAGATGTGCAATGTGTGTTTATAGTCACATGGATGCC  200

seq1  GTGATGCACCAGGGAGGTTAGTCAAATTGCAACATTTGGGGAATTGGTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCACCAGGGAGGTTAGTCAAATTGCAACATTTGGGGAATTGGTTC  250

seq1  TCTTCACCTCCCTTTGAGACAAAGTATCTCCCTTGCTTCTGCCATCCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCTCCCTTTGAGACAAAGTATCTCCCTTGCTTCTGCCATCCTCT  300

seq1  GAGCTGCAGGTTAGTTGACCTCCCATCTTCTAGACAGCTTTTTGGTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCAGGTTAGTTGACCTCCCATCTTCTAGACAGCTTTTTGGTCTCT  350

seq1  ATCCATTTCATCTTAGCAGTGCTGATAACTGGGTTTTGTTTTTGTTTATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTCATCTTAGCAGTGCTGATAACTGGGTTTTGTTTTTGTTTATG  400

seq1  GATTCCAGGGGTTGAACTTCGGTTGTCAGGTTTGAACAGCAAATACATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAGGGGTTGAACTTCGGTTGTCAGGTTTGAACAGCAAATACATTT  450

seq1  ACACATCAAGCCATCTCACTCTCCCCCTATTGTTTAGATTTATCTTTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCAAGCCATCTCACTCTCCCCCTATTGTTTAGATTTATCTTTTTA  500

seq1  AAAGAATTGTGTGTGTGAGAGTGTTTCCCCTGCATGTGTGTGTGCACAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTGTGTGTGTGAGAGTGTTTCCCCTGCATGTGTGTGTGCACAAG  550

seq1  TTGTGCTGCAGCCTGTTGGTGGCAGAGAACATGAGATCTTTTGGAGCCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGCAGCCTGTTGGTGGCAGAGAACATGAGATCTTTTGGAGCCAC  600

seq1  CCATGTGGCTGCTGAGAGTGGAACCTGGTGCTCACAAAAGCAGCAAGTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGCTGCTGAGAGTGGAACCTGGTGCTCACAAAAGCAGCAAGTGC  650

seq1  CCTTAACTGCTGAGCCATCTCTCCACCCTTCCCATGGATTCCTTTGCACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACTGCTGAGCCATCTCTCCACCCTTCCCATGGATTCCTTTGCACA  700

seq1  GTAGTCTTACTTTTACATCTTCGTACAATTAAATGCCCACTGGGTAGTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTTACTTTTACATCTTCGTACAATTAAATGCCCACTGGGTAGTGA  750

seq1  ACATCTATTAAAGGTGCTTTAGAGAGCTTAAACAGAGCACAGAACATTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTAAAGGTGCTTTAGAGAGCTTAAACAGAGCACAGAACATTAT  800

seq1  GTCTGTCCACACATTTCTTTTGCTCTCTCTCCATTTCTGGTGGTTGAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCCACACATTTCTTTTGCTCTCTCTCCATTTCTGGTGGTTGAGTT  850

seq1  TCCTTCTGATATCCTTGCCTGGTTTACCAACGTCCTTTCTTTAGCAACTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGATATCCTTGCCTGGTTTACCAACGTCCTTTCTTTAGCAACTC  900

seq1  TCTTAGTGCATTCGGCAATATCTCTTAGTTCTCCCTTCTCTGTGGACACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTGCATTCGGCAATATCTCTTAGTTCTCCCTTCTCTGTGGACACT  950

seq1  TCCAGTCACTGCTATAGAATTC  971
      ||||||||||||||||||||||
seq2  TCCAGTCACTGCTATAGAATTC  972