BAC Information

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BAC

Clone NameB6Ng01-083N22
Chromosome3 (Build37)
Map Location 157,660,705 - 157,832,043
singlet/doubletdoublet
Overlap geneAnkrd13c, Sfrs11, Lrrc40, Lrrc7
Upstream geneNegr1, LOC546818, Zranb2, Ptger3, LOC433686, LOC624684, Cth
Downstream geneLOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083N22.bB6Ng01-083N22.g
ACCDH898009DH898010
length1,0931,023
definitionDH898009|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N22, 5' end.DH898010|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,830,950 - 157,832,043)(157,660,705 - 157,661,739)
sequence
gaattcactacaaatataagaacatttaaaattgcttaatttcataattg
gatagataaaaagcaagaaaaatatctgtggtcataaatttaataataac
ccatagtagataaatttagtttaagtattccatgaacatgccaaaaataa
tacatcttctgccccaagcttaatctggtttcacaacattatctaccatt
atctatctttgaggataaaagtggggtaataatttcttctttctcttcac
tccttatcccttccaaatagttactcaaaccttcacatattctgctttgt
ttcctcaagtccacaactctgtcagcattgctaccaaagccattgtcttt
ttcctttactttgtccccagcctccttgttgccttggcaacgcttttcct
aaaaagagtgccaacctaattgtttccttggcaatagcttcttactgctg
ggagaaaagtctgaggttcttcattagctagggaagctacaatggaagct
gatttccaacctgatgtgtcctatgtgacccgccccatccctttctccat
ccgctgatgtgatctctgtaaaaagaaattccagtggagatttcaatact
tttcctgaaatcaagactgtatcgcctttccattgagccaactgtaggca
ttcattgccctcttaaatatagccaagttaagggccacactacattttat
tcagtgtcctgatttaattagtgtgaataaccaagtaggttattgattat
gaaggctctgcatctattgtatatttttgcatctgtatatattttgtatt
ttttattcagggtttcaatacttgtatattagcccaggctggtcacaaac
tcaaaactaacctgcttctgcctcctaaaggaccatgactgcaagcttgt
accaccttgtcagtgtggtgagtgtagactgtgcaatagagatttgcaca
cttcattatagaatcagccaggtgattaaacacctttaaccaagggagaa
aaatgaagaattgagtagcagactgaaaaagtaaatctcgaggtaataca
aagtattgcctagttgtaatggtgcacttgggaggtggaggaa
gaattctgactgactttaaaaacagccaacaggtttactgtgttactgat
ctctccttttcttactgtagttgaaatgagtacattaacttatattcttc
atctgtgattctccctactttaaaaatatagtccattcaggattagagac
tctgcttatgaggcagaggcaggcagatctttgcaagttcaaggccagcc
tggtctacatagtgagttttaggacagggctactttgagagatgctgtct
taaaaaaacaaaaacaaaaacaaagaaagatggaagcctccgtaagtctg
tagaggtgcttgctgtggcttcatttggctgtcatatttttttttttttt
tgagccagatacactggtgtgcacttgtgttgctggaagctcttctcttc
ttttattttttttaattaattaattaattaatttatgtgcacttgcgttg
ctggaagctcttctttctatctatctatctatctatctatctatctatct
atctatctatctatctatggtttgttcgagacagggtttctctgtgtagc
cctggctgtcctggaactcactctgtagaccaggttgtccttgaactcag
aaatccacctgcctctgcttcccaattgccagaattaaaggcatgcgaca
ctaccacccagcttggaagctcttttgatccaaggagtttgtggttggtt
gttagaaacctgcagtaaagtttcagccctgtgccctcacctgggcagta
ttaatagacccaggtaatttctttttttttttttgcagggggcggaagat
caagggttgtagggcagtcttgagtaggtcagctggctgactttgaacct
aatgtgtggtagaggctgaccttgatcctcttgcttccatttcccacact
gggattgcaggcatctatgccatttccagtgaccatgaccctttaatttt
ttttcctgccgcactgctcatggacataattttcttctatgcttaagttt
tgagctagtaccctgcatttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_157830950_157832043
seq2: B6Ng01-083N22.b_47_1139 (reverse)

seq1  TTCCTCCACCTCCCAAGTGCACCATTAC-ACTAGGCAATACTTTGTATTA  49
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCCTCCACCTCCCAAGTGCACCATTACAACTAGGCAATACTTTGTATTA  50

seq1  CCTTCGAGATTTACTTTTTCAGTCTTGCTTACCTCAATTCTTCATTTTTC  99
      || ||||||||||||||||||||| ||||   ||||||||||||||||||
seq2  CC-TCGAGATTTACTTTTTCAGTC-TGCT--ACTCAATTCTTCATTTTTC  96

seq1  TCCCTTGGTT-AAGGTGTTTAATCACCTGGCTGATTCTATAATGAAGTGT  148
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGGTTAAAGGTGTTTAATCACCTGGCTGATTCTATAATGAAGTGT  146

seq1  GCAAATCTCTATTGCACAGTCTACACTCACCACACTGACAAGGTGGTACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCTCTATTGCACAGTCTACACTCACCACACTGACAAGGTGGTACA  196

seq1  AGCTTGCAGTCATGGTCC-TTAGGAGGCAGAAGCAGGTTAGTTTTGAGTT  247
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGCTTGCAGTCATGGTCCTTTAGGAGGCAGAAGCAGGTTAGTTTTGAGTT  246

seq1  TGTGACCAGCCTGGGCTAATATACAAGTATTGAAACCCTGAATAAAAAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAGCCTGGGCTAATATACAAGTATTGAAACCCTGAATAAAAAAT  296

seq1  ACAAAATATATACAGATGCAAAAATATACAATAGATGCAGAGCCTTCATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATATACAGATGCAAAAATATACAATAGATGCAGAGCCTTCATA  346

seq1  ATCAATAACCTACTTGGTTATTCACACTAATTAAATCAGGACACTGAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAACCTACTTGGTTATTCACACTAATTAAATCAGGACACTGAATA  396

seq1  AAATGTAGTGTGGCCCTTAACTTGGCTATATTTAAGAGGGCAATGAATGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGTGTGGCCCTTAACTTGGCTATATTTAAGAGGGCAATGAATGC  446

seq1  CTACAGTTGGCTCAATGGAAAGGCGATACAGTCTTGATTTCAGGAAAAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTTGGCTCAATGGAAAGGCGATACAGTCTTGATTTCAGGAAAAGT  496

seq1  ATTGAAATCTCCACTGGAATTTCTTTTTACAGAGATCACATCAGCGGATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATCTCCACTGGAATTTCTTTTTACAGAGATCACATCAGCGGATG  546

seq1  GAGAAAGGGATGGGGCGGGTCACATAGGACACATCAGGTTGGAAATCAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGGATGGGGCGGGTCACATAGGACACATCAGGTTGGAAATCAGC  596

seq1  TTCCATTGTAGCTTCCCTAGCTAATGAAGAACCTCAGACTTTTCTCCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGTAGCTTCCCTAGCTAATGAAGAACCTCAGACTTTTCTCCCAG  646

seq1  CAGTAAGAAGCTATTGCCAAGGAAACAATTAGGTTGGCACTCTTTTTAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGAAGCTATTGCCAAGGAAACAATTAGGTTGGCACTCTTTTTAGG  696

seq1  AAAAGCGTTGCCAAGGCAACAAGGAGGCTGGGGACAAAGTAAAGGAAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCGTTGCCAAGGCAACAAGGAGGCTGGGGACAAAGTAAAGGAAAAA  746

seq1  GACAATGGCTTTGGTAGCAATGCTGACAGAGTTGTGGACTTGAGGAAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGGCTTTGGTAGCAATGCTGACAGAGTTGTGGACTTGAGGAAACA  796

seq1  AAGCAGAATATGTGAAGGTTTGAGTAACTATTTGGAAGGGATAAGGAGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAATATGTGAAGGTTTGAGTAACTATTTGGAAGGGATAAGGAGTG  846

seq1  AAGAGAAAGAAGAAATTATTACCCCACTTTTATCCTCAAAGATAGATAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAGAAGAAATTATTACCCCACTTTTATCCTCAAAGATAGATAAT  896

seq1  GGTAGATAATGTTGTGAAACCAGATTAAGCTTGGGGCAGAAGATGTATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATAATGTTGTGAAACCAGATTAAGCTTGGGGCAGAAGATGTATTA  946

seq1  TTTTTGGCATGTTCATGGAATACTTAAACTAAATTTATCTACTATGGGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCATGTTCATGGAATACTTAAACTAAATTTATCTACTATGGGTT  996

seq1  ATTATTAAATTTATGACCACAGATATTTTTCTTGCTTTTTATCTATCCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAATTTATGACCACAGATATTTTTCTTGCTTTTTATCTATCCAA  1046

seq1  TTATGAAATTAAGCAATTTTAAATGTTCTTATATTTGTAGTGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATTAAGCAATTTTAAATGTTCTTATATTTGTAGTGAATTC  1093

seq1: chr3_157660705_157661739
seq2: B6Ng01-083N22.g_68_1090

seq1  GAATTCTGACTGACTTTAAAAACAGCCAACAGGTTTACTGTGTTACTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTGACTTTAAAAACAGCCAACAGGTTTACTGTGTTACTGAT  50

seq1  CTCTCCTTTTCTTACTGTAGTTGAAATGAGTACATTAACTTATATTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTTTCTTACTGTAGTTGAAATGAGTACATTAACTTATATTCTTC  100

seq1  ATCTGTGATTCTCCCTACTTTAAAAATATAGTCCATTCAGGATTAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGATTCTCCCTACTTTAAAAATATAGTCCATTCAGGATTAGAGAC  150

seq1  TCTGCTTATGAGGCAGAGGCAGGCAGATCTTTGCAAGTTCAAGGCCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTATGAGGCAGAGGCAGGCAGATCTTTGCAAGTTCAAGGCCAGCC  200

seq1  TGGTCTACATAGTGAGTTTTAGGACAGGGCTACTTTGAGAGATGCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACATAGTGAGTTTTAGGACAGGGCTACTTTGAGAGATGCTGTCT  250

seq1  TAAAAAAACAAAAACAAAAACAAAGAAAGATGGAAGCCTCCGTAAGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAACAAAAACAAAAACAAAGAAAGATGGAAGCCTCCGTAAGTCTG  300

seq1  TAGAGGTGCTTGCTGTGGCTTCATTTGGCTGTCATATTTTTTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGCTTGCTGTGGCTTCATTTGGCTGTCATATTTTTTTTTTTTTT  350

seq1  TGAGCCAGATACACTGGTGTGCACTTGTGTTGCTGGAAGCTCTTCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGATACACTGGTGTGCACTTGTGTTGCTGGAAGCTCTTCTCTTC  400

seq1  TTTTATTTTTTTTAATTAATTAATTAATTAATTTATGTGCACTTGCGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTTTTAATTAATTAATTAATTAATTTATGTGCACTTGCGTTG  450

seq1  CTGGAAGCTCTTCTTTCTATCTATCTATCTATCTATCTATCTATCTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGCTCTTCTTTCTATCTATCTATCTATCTATCTATCTATCTATCT  500

seq1  ATCTATCTATCTATCTATGGTTTGTTCGAGACAGGGTTTCTCTGTGTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATGGTTTGTTCGAGACAGGGTTTCTCTGTGTAGC  550

seq1  CCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGTTGTCCTTGAACTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGTTGTCCTTGAACTCAG  600

seq1  AAATCCACCTGCCTCTGCTTCCCAATTGCCAGAATTAAAGGCATGCGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTGCCTCTGCTTCCCAATTGCCAGAATTAAAGGCATGCGACA  650

seq1  CTACCACCCAGCTTGGAAGCTCTTTTGATCCAAGGAGTTTGTGGTTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCCAGCTTGGAAGCTCTTTTGATCCAAGGAGTTTGTGGTTGGTT  700

seq1  GTTAGAAACCTGCAGTAAAGTTTCAGCCCTGTGCCCTCACCTGGGCAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAACCTGCAGTAAAGTTTCAGCCCTGTGCCCTCACCTGGGCAGTA  750

seq1  TTAATAGACCCAGGTAATTTTTTTTTTTTTTTTTTTTTGCAGGGGGCGGA  800
      |||||||||||||||||    ||| |||||||||||||||||||||||||
seq2  TTAATAGACCCAGGTAA----TTTCTTTTTTTTTTTTTGCAGGGGGCGGA  796

seq1  GGATCAGGGGTTGTAGGGGCAGTCTTGAGTAGGTCAGGCTGGCTGACTTT  850
       ||||| |||||||| |||||||||||||||||||| |||||||||||||
seq2  AGATCAAGGGTTGTA-GGGCAGTCTTGAGTAGGTCA-GCTGGCTGACTTT  844

seq1  GAACCTAATGTGTGGTAGAGGCTGACCTTGATCCTCTTGCTTCCATTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAATGTGTGGTAGAGGCTGACCTTGATCCTCTTGCTTCCATTTCC  894

seq1  CACACTGGGATTGCAGGCATCTATGCCATTTCCAGTGACCATGACCCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CACACTGGGATTGCAGGCATCTATGCCATTTCCAGTGACCATGACCCTTT  944

seq1  AATTTTTTTTCCTGCCGCACTGCTCATTGACATAATTTTCTTCTATTGCT  1000
      ||||||||||||||||||||||||||| ||||||||||||||||| ||| 
seq2  AATTTTTTTTCCTGCCGCACTGCTCATGGACATAATTTTCTTCTA-TGC-  992

seq1  TTAAGTTTTTTGAAGCTAGTAACCTTGCATTTGTC  1035
      |||||||||    ||||||| ||| ||||||||||
seq2  TTAAGTTTT---GAGCTAGT-ACCCTGCATTTGTC  1023