BAC Information

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BAC

Clone NameB6Ng01-084H01
Chromosome3 (Build37)
Map Location 16,106,197 - 16,106,596
singlet/doubletsinglet
Overlap geneYthdf3
Upstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
Downstream geneLOC100040034, LOC100040059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084H01.bB6Ng01-084H01.g
ACCDH898398DH898399
length1,196394
definitionDH898398|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H01, 5' end.DH898399|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacacaaaagtaagtgatgaaaagcttgaagcaatcccactaaa
atcagggactagacatggctgcccactttctccatacctattcaacatag
tacttaaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagatgaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctgaaaattccaccagagaactcctaaagc
tgataaacagcttcggtgaggtagctggatatgaaattaactcaaccaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaatagtataaaatatcttggcgt
gactctaactaaggaagtgaaagatctgtatgttaaaaacttcaagtccc
tgaagaaagaaattaaagaagatatcagaagatggaaagatctcccatgc
tcatggattagcaggatcaatattgtaaaaatggctatcttgccaaaagc
aatctacagattcaatgcaatccccatcaaaattccaactcaattcttca
acgaattagaaagagcaatctgcaaattcatctggaataacaaaaaacct
aggatagcaaaagctcttctcaaggataaaagtacctctggtggaatcac
catgcctgacctaaagctttactacagagcaattgttataaaaactgcat
ggtactggtatagtgacagacaaaggagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgaaaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgctgg
cacaactggttgtatcatgtagaataatgagaatcgatccattcctatct
ctgtactaagtcaaatctagtggatcaggactcatataaatcagagacac
tgaaactatagaggagaagtggcaagctcgagattgggcaaggcaaaatc
taatgaaccatgcctgtgctgtagatcggaactgaatgtactcttgaact
gcaagctcgcaagcaaggaccgtcatgacaaagacccaccgattga
tgttgagctaaagtaattagtttccaaaccttagggctcagaagagctgg
attattttagaaacatagctctttatgtatttagtaatggactttagcta
catttctaacaggcaccctaggtagtcctggtgctagttttttgctatgc
tggactgtcagaaactgcattggagtgatgcagactgccatttgcacctc
agtggactgctgaaatgaattactaaatataattaagagttttctcgtta
aatctgggaagtgaggaaaataggttgagaagttgccagtgagtcttttt
agcttagcagtgaaatagattgtaattgttacatcaggagaatggtttga
catgtggatagtgtgatgtggggaaagatgtgtttgggggatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16106197_16106596
seq2: B6Ng01-084H01.g_65_464

seq1  GAATTCTGTTGAGCTAAAGTAATTAGTTTCCAAACCTTAGGGCTCAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGAGCTAAAGTAATTAGTTTCCAAACCTTAGGGCTCAGAAG  50

seq1  AGCTGGATTATTTTAGAAACATAGCTCTTTATGTATTTAGTAATGGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGATTATTTTAGAAACATAGCTCTTTATGTATTTAGTAATGGACTT  100

seq1  TAGCTACATTTCTAACAGGCACCCTAGGTAGTCCTGGTGCTAGTTTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACATTTCTAACAGGCACCCTAGGTAGTCCTGGTGCTAGTTTTTTG  150

seq1  CTATGCTGGACTGTCAGAAACTGCATTGGAGTGATGCAGACTGCCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTGGACTGTCAGAAACTGCATTGGAGTGATGCAGACTGCCATTTG  200

seq1  CACCTCAGTGGACTGCTGAAATGAATTACTAAATATAATTAAGAGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGTGGACTGCTGAAATGAATTACTAAATATAATTAAGAGTTTTC  250

seq1  TCGTTAAATCTGGGAAGTGAGGAAAATAGGTTGAGAAGTTGCCAGTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAAATCTGGGAAGTGAGGAAAATAGGTTGAGAAGTTGCCAGTGAGT  300

seq1  CTTTTTAGCTTAGCAGTGAAATAGATTGTAATTGTTACATCAGGAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGCTTAGCAGTGAAATAGATTGTAATTGTTACATCAGGAGAATG  350

seq1  GTTTGACATGTGGATAGTGTGATGTGGGGAAAGATGTGTTTGGGGGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACATGTGGATAGTGTGATGTGGGGAAAGATGTGTTTGGGGGATAT  400