MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-084K19
Chromosome	3 (Build37)
Map Location	3,849,825 - 3,850,902
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC667655, LOC100039140, Hnf4g, EG383815, LOC100039157
Downstream gene	LOC100039167, LOC667709
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039140 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Hnf4g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30942 MGI:1353604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG383815 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383815 MGI:3649025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 72 ESTs, 7 Proteins

name	LOC100039157 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039167 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039167
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 255 ESTs, 11 Proteins pseudo : _no_value

name	Hnf4g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305146 GeneID:30942 MGI:1353604
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatocyte nuclear factor 4, gamma transcript_id : NM_013920.1

name	EG383815 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369198 GeneID:383815 MGI:3649025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 72 ESTs, 7 Proteins product : predicted gene, EG383815 transcript_id : XM_357274.5

name	Hnf4g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305147 CCDS:CCDS17226.1 GeneID:30942 MGI:1353604
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 function : transcription factor product : hepatocyte nuclear factor 4, gamma protein_id : NP_038948.1

name	EG383815 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38076180 GeneID:383815 MGI:3649025
definition	codon_start : 1 product : hypothetical protein protein_id : XP_357274.1

name	LOC667655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667655
definition	number : 2 pseudo : _no_value

name	LOC667655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667655
definition	number : 1 pseudo : _no_value

name	LOC100039140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039140
definition	number : 1 pseudo : _no_value

name	LOC100039140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039140
definition	number : 2 pseudo : _no_value

name	LOC100039157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039157
definition	number : 1 pseudo : _no_value

name	LOC100039167 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039167
definition	number : 1 pseudo : _no_value

name	LOC667709 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250609 GeneID:667709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 255 ESTs, 11 Proteins product : similar to Murine homolog of human ftp-3 pseudo : _no_value transcript_id : XR_032506.1

clone name	MSMg01-213F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-305E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-277I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-344E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-478H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-237C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-467J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-209H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437I24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-319E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-320O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462N05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145N08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-084K19.b	B6Ng01-084K19.g
ACC	DH898562	DH898563
length	1,048	1,064
definition	DH898562\|Mus musculus domesticus DNA, BAC clone: B6Ng01-084K19, 5' end.	DH898563\|Mus musculus domesticus DNA, BAC clone: B6Ng01-084K19, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctataattttcatgaacatttctcactccttagagtacctgaagc tattgattataattctaaaatactgaataataaccacttagaatatatcc caaggataatgctacctattaaaatgaagttacatctataataaactgta tgcattaggtagcataaacaccattatcagtgttttacacctcttcatta attgctaccaacaatgccatgttgagataggtgctattagcactatattg tagacaaagacattatgccttaggaaagttaatttatctagactaattgt ttaagtggtgagttggggtttgaacccagttgcctaacatcaaagttctc aatcttaaacatccttgaaaaattgacatcaaacaatgggatataatttc agacaattaaattgaatcacacacacaatatgtagaaacttttgggtcag atttttattagtaattcaggcagcccacttagatgtaaatatttgttaca gcttctctaacgtttcaaaaaaaaacttttttaaaaattgaatttctgag aagaaatacggcgaaggagtagttatataaaagaatcactggggaaaggt aacttgaaaaagaacatattttggagtataattctgagtgcttttaaaac aaacgcttttagagagtcaatctctcagcaattctcacacttatctgcaa cagcattgttcaaagaataaattgcatgcatgggaaggttgttctccatt gacttgaagcactaagtaattatctcattccgtaccaccaaatctgctca gtaagttaaaatagactcaacttgatgaagtatgtaatttgaaattctta gattgtaatttgatgattacttcttcatagctgcttagaagatttttcat ttgtaaagctaaacatttgctatgaacagcatcaaagaactgacatgcat ccttgttatatcatcttctcttgaatattaaaaggatagtctgctcacgc gatctttactctctaataccaataagtaatccctgtacacattcgatt	gaattccaagcccaaggtcttgctaaggacgaactaggactgttggaaca ctggcggacggctttagctatgtcagaattcaatcttaaaaggcacttat gataggaaaatattgaaagagagcacttggatccatacactagactaacg cgggaatggaacgcgggaatgaaagattactgtatgggtagggaacgcta gactccaggaggagagcttccttgaaactcttttgcctcatgagtaactt ttaagcctctcggcttgtccagttgactcgaccagagagcgtagcagagt atcaggtgtgggatgtgatggtagagatgtacggtgggtcaggaaattgg acaaaggtgtgtagcagtgggcgtggggagctgggggtagccaccagaaa gtcccagactcgaggaaatcaagaagaacccaggaaacaatggggataac tttaactgaaatacctaataaaggggagagagatcctgtagagaccatat ctagaggttagtcatgacctccaagtgaaggatggggctaccaacccatc tctaaaaatttaacccagaattgctcttgtctaaaggaaataaagggaca acgagtagaacagagactgaaggaaaagccatccagagactgccctacat ggggatctgtcccatctgcagacaccaaacccagacattgttgctgatgc tgagaagtgcttgcttgagagtagccttatatagccatttcctggggagg ctctgccagagtcttgaccaagatgcaggtgcttgcagccaccattggat gaagcatgggggatcccaatgggagggagctagtggaattgagtgaagca gctgagggaatttacacccccataggaaggacaacaatatcacccaccag attcttccagaactccaaaggactaaacttgttaccaaatggttacacat gtagggaactcatggcttccagctgcaaatgtatcaaaggactgtcttat tctgcagtcataggggaggggaagctcttggttcttttgaaaggctcaat gcttccacactgtt
quality values	Open. Hide. 61 61 21 30 61 53 50 43 61 50 55 61 61 61 61 38 24 47 61 61 55 49 37 61 61 55 49 19 49 17 11 19 12 12 10 15 18 22 27 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 20 19 20 19 28 23 26 26 28 26 36 36 36 52 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 20 34 26 22 37 39 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 39 28 28 26 32 39 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 50 55 55 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 53 61 61 53 53 53 57 57 50 57 57 57 57 53 57 52 57 53 50 57 57 53 57 53 57 57 53 53 57 53 57 52 57 57 57 57 57 53 57 53 53 57 57 57 53 57 57 43 32 57 57 57 57 57 57 57 57 53 52 57 57 47 47 47 38 57 57 57 57 46 57 57 53 53 41 57 53 57 52 57 57 38 57 57 38 57 41 30 38 50 53 30 57 50 53 57 57 17 46 53 40 53 50 52 52 48 53 53 53 53 57 57 57 57 37 53 57 42 57 40 52 53 57 41 41 38 46 57 47 40 57 26 52 57 42 57 52 53 40 57 57 57 53 33 41 53 41 40 48 48 40 46 57 53 57 53 53 27 37 37 31 41 48 40 43 53 40 37 53 21 30 44 30 33 51 51 30 30 51 51 31 40 23 42 45 40 30 40 27 51 46 44 39 36 32 27 48 34 30 33 28 36 29 44 38 47 29 30 28 31 48 27 29 30 48 41 38 33 34 39 28 30 29 29 32 33 33 34 35 28 18 31 29 24 27 43 29 29 28 43 21 29 29 28 51 33 29 34 31 29 22 46 36 28 36 36 33 28 24 38 31 29 29 29 51 38 20 12 12 20 16 28 41 20 26 29 29 34 31 20 32 26 29 27 28 25 21 29 27 39 27 35 24 27 28 27 39 34 27 18 28 17 22 21 28 29 24 28 20 27 20 22 27 28 24 28 29 22 25 28 28 19 51 19 21 31 23 28 22 31 33 22 31 26 28 20 26 18 17 22 51 51 22 14 10 11 31 25 26 34 12 23 22 19 23 32 18 21 30 22 29 31 13 18 11 28 17 20 17 13 44 22 12 13 44 19 11 17 18 5 9 8 4 22 13 6 20 13 27 17 22 44 9 13 29 12 30 20 12 25 12 13 22 10 23 17 6 4 4 5 29 10 25 18 29 22 19 15 13 8 14 13 7 28 20 36 42 37 30 21 8 22 30 7 10 5 18 42 30 6 20 9 30 33 18 9 12 19 23 8 17 11 11 11 5 20 24 5 10 5 16 23 20 23 19 22 6 3 3 10 23 16 23 5 6 8 9 11 24 7 24 7 25 15 8 7 8 3 5 13 10 20 4 11 11 9 8 6 22 7 5 14 11 10 8 7 5 4 11 4 2 3 24 21 8 15 11 6 9 8 17 7 10 27 19 12 4 4 3 7 4 6 5 15 4 3 5 21 16 7 4 5 10 4 5 4 6 5 4 5 5 3 3 10 6 6 9 4 14 3 6 4 12 21 13 3 3 3 3 4 4 4 3 8 4 5 12 12 9 6	Open. Hide. 55 61 49 49 55 15 18 12 10 11 13 13 13 10 12 25 59 59 61 61 61 59 61 61 59 61 59 61 61 59 59 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 59 43 43 41 35 30 28 35 59 59 61 59 61 59 61 61 61 59 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 59 61 61 59 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 61 61 59 59 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 59 61 61 59 59 59 59 59 49 59 61 59 61 59 61 59 61 61 52 52 59 49 43 59 61 52 41 43 49 36 43 59 59 59 59 61 61 61 59 61 61 61 61 61 61 61 61 55 61 61 61 55 55 43 55 52 55 61 55 55 55 55 52 55 52 61 55 52 61 61 61 61 52 52 43 52 55 52 52 52 39 49 52 61 61 61 61 61 55 61 61 61 61 61 55 47 55 55 61 61 61 55 55 61 55 61 61 61 55 61 61 61 50 55 50 61 55 55 61 55 61 55 61 61 47 43 61 61 61 61 55 61 47 61 61 61 61 61 61 61 61 61 61 61 61 50 61 53 61 53 52 47 61 61 61 53 61 61 61 47 53 52 53 61 53 61 61 61 61 61 61 39 61 34 32 61 61 61 61 53 61 50 61 43 43 61 53 61 47 43 61 61 61 61 47 53 61 61 61 61 50 61 38 45 61 61 61 61 52 45 61 37 31 61 61 53 61 61 61 61 61 27 47 53 45 61 43 61 61 43 57 57 52 42 57 57 53 57 57 53 53 35 53 53 39 53 43 43 47 42 52 50 45 36 30 53 34 39 52 57 57 42 53 39 53 47 34 42 45 38 43 47 34 40 53 39 25 33 47 40 47 50 50 57 53 57 53 43 50 24 10 9 9 21 10 42 52 30 38 37 50 37 37 34 39 30 53 28 47 25 32 50 41 52 50 30 38 39 33 42 53 30 45 36 33 30 38 38 28 50 50 45 30 42 43 42 45 52 36 15 41 45 53 42 53 16 34 52 28 42 41 25 25 30 47 24 10 16 17 57 29 57 32 37 50 14 45 53 24 52 45 31 27 38 27 27 30 39 20 31 36 27 18 23 20 38 30 35 11 40 11 57 20 36 42 40 36 47 38 30 25 35 6 5 39 10 10 29 22 16 41 23 25 28 53 19 28 36 31 53 33 15 28 14 10 16 24 27 24 34 21 13 22 11 21 12 26 27 37 35 33 22 30 44 23 22 24 24 22 33 30 19 27 20 32 30 25 40 36 25 16 12 12 27 16 16 11 32 5 16 17 24 27 17 17 23 24 11 10 23 9 12 19 27 21 32 30 18 47 18 27 14 9 28 28 37 29 11 31 25 24 25 29 48 39 20 22 30 15 29 27 28 11 5 12 18 18 29 27 30 8 10 13 8 8 12 36 30 32 39 22 29 20 14 16 36 11 13 27 29 21 11 31 17 10 51 9 12 24 10 10 18 29 18 20 30 30 33 7 43 23 33 29 33 27 29 26 30 24 29 46 14 28 14 10 31 18 36 14 28 18 6 13 12 7 13 15 7 7 16 9 10 15 17 14 6 41 17 27 10 32 7 15 22 26 16 24 10 11 7 10 26 16 14 20 29 20 16 7 30 21 21 29 17 16 38 22 26 46 20 17 14 21 19 13 35 20 43 27 21 12 14 17 12 16 28 14 15 15 10 12 11 6 6 19 23 17 6 17 11 51 30 29 16 11 31 13 23 20 24 13 8 25 20 19 10 7 8 5 9 11 23 18 6 19 12 6 18 16 7 11 17 15 8 10 8 29 16 14 8 5 5 5 7 4 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_3849825_3850902
seq2: B6Ng01-084K19.b_47_1094 (reverse)

seq1  AATCAGAATGTGTAACAGGGATTAAACTATATGTGTATTAGAAGAGTAAA  50
      |||| |||||||| |||||||||  ||| |||  ||||||| ||||||||
seq2  AATC-GAATGTGT-ACAGGGATT--ACT-TATTGGTATTAG-AGAGTAAA  44

seq1  GAATTCGC-TGAGGCAAGACTAATCACCTTTTAGATTATCAAGAGAAGAT  99
      ||  |||| ||||   ||||||    ||||||| ||  ||||||||||||
seq2  GA--TCGCGTGAG--CAGACTA---TCCTTTTA-ATATTCAAGAGAAGAT  86

seq1  GATTAATAAACAAAGGATTGCATGTCAAGTTCTGTTGATGCTGTTTCCAT  149
      |||  ||||   ||||| |||||||| |||||| |||||||||||  |||
seq2  GAT--ATAA--CAAGGA-TGCATGTC-AGTTCT-TTGATGCTGTT--CAT  127

seq1  AGCCAAATGTTTTAGCTTTTACAAATGAAAAAATCTCTAAGCAGCTTATG  199
      || |||||| |||||| |||||||||||||||   |||||||||| ||||
seq2  AG-CAAATG-TTTAGC-TTTACAAATGAAAAATCTTCTAAGCAGC-TATG  173

seq1  GAAAGAAGTAATCATTCAAATTACAATCTTAAGAATTTCAAATTACATAC  249
        |||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  --AAGAAGTAATCA-TCAAATTACAATC-TAAGAATTTCAAATTACATAC  219

seq1  TTCATCAAGTTGAGTCTATTTTAACTTACTGAGCAGATTTGGTGGTACGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAAGTTGAGTCTATTTTAACTTACTGAGCAGATTTGGTGGTACGG  269

seq1  AATGAGATAATTACTTAGTGCTTCAAGTCAATGGAGAACAACCTTCCCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATAATTACTTAGTGCTTCAAGTCAATGGAGAACAACCTTCCCAT  319

seq1  GCATGCAATTTATTCTTTGAACAATGCTGTTGCAGATAAGTGTGAGAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAATTTATTCTTTGAACAATGCTGTTGCAGATAAGTGTGAGAATT  369

seq1  GCTGAGAGATTGACTCTCTAAAAGCGTTTGTTTTAAAAGCACTCAGAATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGATTGACTCTCTAAAAGCGTTTGTTTTAAAAGCACTCAGAATT  419

seq1  ATACTCCAAAATATGTTCTTTTTCAAGTTACCTTTCCCCAGTGATTCTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCAAAATATGTTCTTTTTCAAGTTACCTTTCCCCAGTGATTCTTT  469

seq1  TATATAACTACTCCTTCGCCGTATTTCTTCTCAGAAATTCAATTTTTAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAACTACTCCTTCGCCGTATTTCTTCTCAGAAATTCAATTTTTAAA  519

seq1  AAAGTTTTTTTTTGAAACGTTAGAGAAGCTGTAACAAATATTTACATCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTTTTTTGAAACGTTAGAGAAGCTGTAACAAATATTTACATCTA  569

seq1  AGTGGGCTGCCTGAATTACTAATAAAAATCTGACCCAAAAGTTTCTACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCTGCCTGAATTACTAATAAAAATCTGACCCAAAAGTTTCTACAT  619

seq1  ATTGTGTGTGTGATTCAATTTAATTGTCTGAAATTATATCCCATTGTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGTGTGATTCAATTTAATTGTCTGAAATTATATCCCATTGTTTG  669

seq1  ATGTCAATTTTTCAAGGATGTTTAAGATTGAGAACTTTGATGTTAGGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAATTTTTCAAGGATGTTTAAGATTGAGAACTTTGATGTTAGGCAA  719

seq1  CTGGGTTCAAACCCCAACTCACCACTTAAACAATTAGTCTAGATAAATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCAAACCCCAACTCACCACTTAAACAATTAGTCTAGATAAATTA  769

seq1  ACTTTCCTAAGGCATAATGTCTTTGTCTACAATATAGTGCTAATAGCACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTAAGGCATAATGTCTTTGTCTACAATATAGTGCTAATAGCACC  819

seq1  TATCTCAACATGGCATTGTTGGTAGCAATTAATGAAGAGGTGTAAAACAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAACATGGCATTGTTGGTAGCAATTAATGAAGAGGTGTAAAACAC  869

seq1  TGATAATGGTGTTTATGCTACCTAATGCATACAGTTTATTATAGATGTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATGGTGTTTATGCTACCTAATGCATACAGTTTATTATAGATGTAA  919

seq1  CTTCATTTTAATAGGTAGCATTATCCTTGGGATATATTCTAAGTGGTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTTAATAGGTAGCATTATCCTTGGGATATATTCTAAGTGGTTAT  969

seq1  TATTCAGTATTTTAGAATTATAATCAATAGCTTCAGGTACTCTAAGGAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTATTTTAGAATTATAATCAATAGCTTCAGGTACTCTAAGGAGT  1019

seq1  GAGAAATGTTCATGAAAATTATAGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  GAGAAATGTTCATGAAAATTATAGAATTC  1048

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information