BAC Information

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BAC

Clone NameB6Ng01-084O14
Chromosome3 (Build37)
Map Location 151,161,321 - 151,162,430
singlet/doubletsinglet
Overlap geneEltd1
Upstream geneLOC100040463, LOC623554
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084O14.bB6Ng01-084O14.g
ACCDH898730DH898731
length1,2531,095
definitionDH898730|Mus musculus domesticus DNA, BAC clone: B6Ng01-084O14, 5' end.DH898731|Mus musculus domesticus DNA, BAC clone: B6Ng01-084O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccccttgtgcccatatctttgcggcttttccccactttctcct
ctataaatttcagtgtctctggtcttatgagaagatgtttgatctactta
gacttgaatttgtacaaggagataagaatggatcaatttgcattcttcta
catgatacccaccagttgtgccagcaccatttgttgaaaatgctgtcttt
tttccactggatggttttagctcccttgtcaaagatcaagtgaccatagg
tgtgtggattcatttctggatcttcaattctattccattgatctacctgt
ctgtagctgtaccagtaccatgcagttttttatcactattgctctgtagt
acagcttaaggtcaggcatggtgattccaccagaggttcttttattgttg
agaatagtttttgctatcctaggttttttattattccaaatgaacttgca
aattgccctttctaactcagtgaagaattgagttgaaattttgatgggga
ttgcattgaatctgtagattgcttttggcaggatagccattttgactata
ttaatcctgtcaatccatgagcatgggagatatttccatcttctgagatc
ttcaatttctttcttcagagacttgaagttcttatcatacagatctttca
cttctttagttagagtcacaccaaggtattttatattatttgtgactatt
gtgaagggtcttgtttccctaatttctttctcagcccatttatcctttgt
gttgagaaaagccattaattgtttgagttaattttatatccagctactac
actgaagctgtttatcacgtttagaagttctctgctggaatttttagggt
cacttatatatactatcaattcatctgcaaatagtgatattttgacttct
tcctttccaatttttatcctcttgatctcatcttctggtctaattgctct
ggctaggacttcaagtactatattgaatagggagaaagtgggcagccttg
tctaatcctgattttagtgggattgcttccagcttctccatcacttactt
tgatgttgactaactgggtttgcttgattttgcctttatttatgtttagg
atggcctgggaatatggatcttcccaagactttatacatgaaggggggtt
gatttgtcaaatgcttcctagcatctctatcctagaagaaccttggcttt
gtcctgaattgttctatattggaaagcgttagggatcgcataataaacta
ctg
gaattcaaattgccacttagagcatgcctgcatcgctgcaaacattaata
aaactttaaaaagagtaagtagacactttaggttgaaatatattttattt
tgacattttgatctcagttggaaagtgctaccaaagttctactcaaaaag
atcagcagttggacctcgtgtagaactgaaacttttcacacagccatgta
tgacttacgttgcagatagaattaattcgaaacttccaaagcatgataga
agactttatcctgtttaatttatgctttttttttcattattgcgagtatt
ggagaattattttcaacatgaaaggaagttgttggataaaatggtaaaaa
cacacataggctcagatccagtaccacattccaaggagacatcgtttaat
gcaactagattctgtacttcaaagtgagcacttcaaagagcaaataaagt
aggacattcataaacttgttgttatgtgaccgagactggggatcacacca
cgaggagagaactctcagcaaagctacttccattttatcacaagctaagg
accgctgtggtggaacataaccagaatcagattattaattaataacttct
tacttttgatataaaaacttgtaagaactaataaatctaagtattgggaa
aggtttactgactaggatatatgctgcaataaggaggctattttcaaaat
tatttttttcaattatcccttcaagtgagctctgcttgtctctgaagtat
actcaataattcccagttacttgggaattatttccaaataaattcttttt
tcattgctacatgtcatgatttcattttatcctgataacacattgttcac
ctaagacaagaaaatcaacctctgtgcaaatttgatatgtctcattctgc
gttttaatgcatgtcgtcctgtgtctgatacgtatacaggtatgtctgtg
ttcacatacgtgactgccatgtgcatgtggagacagacatcatgctggat
gactttttcatcatttttcgcttcttactgagacagactccctacccttc
tctcccttctcttcctctcttctcttcccttgcctttctcccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151161321_151162430
seq2: B6Ng01-084O14.g_72_1166

seq1  GAATTCAAATTGCCACTTAGAGCATGCCTGCATCGCTGCAAACATTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTGCCACTTAGAGCATGCCTGCATCGCTGCAAACATTAATA  50

seq1  AAACTTTAAAAAGAGTAAGTAGACACTTTAGGTTGAAATATATTTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAAAAAGAGTAAGTAGACACTTTAGGTTGAAATATATTTTATTT  100

seq1  TGACATTTTGATCTCAGTTGGAAAGTGCTACCAAAGTTCTACTCAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTTGATCTCAGTTGGAAAGTGCTACCAAAGTTCTACTCAAAAAG  150

seq1  ATCAGCAGTTGGACCTCGTGTAGAACTGAAACTTTTCACACAGCCATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGTTGGACCTCGTGTAGAACTGAAACTTTTCACACAGCCATGTA  200

seq1  TGACTTACGTTGCAGATAGAATTAATTCGAAACTTCCAAAGCATGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTACGTTGCAGATAGAATTAATTCGAAACTTCCAAAGCATGATAGA  250

seq1  AGACTTTATCCTGTTTAATTTATGCTTTTTTTTTCATTATTGCGAGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTATCCTGTTTAATTTATGCTTTTTTTTTCATTATTGCGAGTATT  300

seq1  GGAGAATTATTTTCAACATGAAAGGAAGTTGTTGGATAAAATGGTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTATTTTCAACATGAAAGGAAGTTGTTGGATAAAATGGTAAAAA  350

seq1  CACACATAGGCTCAGATCCAGTACCACATTCCAAGGAGACATCGTTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATAGGCTCAGATCCAGTACCACATTCCAAGGAGACATCGTTTAAT  400

seq1  GCAACTAGATTCTGTACTTCAAAGTGAGCACTTCAAAGAGCAAATAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAGATTCTGTACTTCAAAGTGAGCACTTCAAAGAGCAAATAAAGT  450

seq1  AGGACATTCATAAACTTGTTGTTATGTGACCGAGACTGGGGATCACACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTCATAAACTTGTTGTTATGTGACCGAGACTGGGGATCACACCA  500

seq1  CGAGGAGAGAACTCTCAGCAAAGCTACTTCCATTTTATCACAAGCTAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAGAGAACTCTCAGCAAAGCTACTTCCATTTTATCACAAGCTAAGG  550

seq1  ACCGCTGTGGTGGAACATAACCAGAATCAGATTATTAATTAATAACTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTGTGGTGGAACATAACCAGAATCAGATTATTAATTAATAACTTCT  600

seq1  TACTTTTGATATAAAAACTTGTAAGAACTAATAAATCTAAGTATTGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGATATAAAAACTTGTAAGAACTAATAAATCTAAGTATTGGGAA  650

seq1  AGGTTTACTGACTAGGATATATGCTGCAATAAGGAGGCTATTTTCAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACTGACTAGGATATATGCTGCAATAAGGAGGCTATTTTCAAAAT  700

seq1  TATTTTTTTCAATTATCCCTTCAAGTGAGCTCTGCTTGTCTCTGAAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTCAATTATCCCTTCAAGTGAGCTCTGCTTGTCTCTGAAGTAT  750

seq1  ACTCAATAATTCCCAGTTACTTGGGAATTATTTCCAAATAAATTCTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATAATTCCCAGTTACTTGGGAATTATTTCCAAATAAATTCTTTTT  800

seq1  TCATTGCTACATGTCATGATTTCATTTTATCCTGATAACACATTGTTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTACATGTCATGATTTCATTTTATCCTGATAACACATTGTTCAC  850

seq1  CTAAGACAAGAAAATCAACCTCTGTGCAAATTTGATATGTCTCATTCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACAAGAAAATCAACCTCTGTGCAAATTTGATATGTCTCATTCTGC  900

seq1  GTTTTAATGCATGTCGTCCTGTGTCTGATACGTATACAGGTATGTCTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATGCATGTCGTCCTGTGTCTGATACGTATACAGGTATGTCTGTG  950

seq1  TTCACATACGTGACTGCCATGTGCATGTGGAGACCAGACATCAATGCTGT  1000
      ||||||||||||||||||||||||||||||||| |||||||| |||||| 
seq2  TTCACATACGTGACTGCCATGTGCATGTGGAGA-CAGACATC-ATGCTGG  998

seq1  ATGACTTTCTCAATCACTTTTCGCCTTCCTTACTGAGACAGACTCCCCTA  1050
      |||||||| || |||| |||||||  | |||||||||||||||| |||||
seq2  ATGACTTTTTC-ATCATTTTTCGC--TTCTTACTGAGACAGACT-CCCTA  1044

seq1  CCCCTTCTCCTCCCCTTCCTCTTCCTCTCTCTTCCCTCTCCCTTTCCCCT  1100
       ||||||| |||||  | ||||||  |||||||| || ||||||   |||
seq2  -CCCTTCT-CTCCC--TTCTCTTC--CTCTCTTCTCT-TCCCTT--GCCT  1085

seq1  TCCTCCCCCC  1110
      | ||||||||
seq2  TTCTCCCCCC  1095