BAC Information

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BAC

Clone NameB6Ng01-084P11
Chromosome3 (Build37)
Map Location 150,636,540 - 150,801,296
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084P11.bB6Ng01-084P11.g
ACCDH898770DH898771
length8931,084
definitionDH898770|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P11, 5' end.DH898771|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,800,404 - 150,801,296)(150,636,540 - 150,637,627)
sequence
gaattcttttatagcaatgcacaatatatacacactcacacatatacatg
ctctctctctcacacacacacacataaactgtataaaataatgtatttcc
tttttccataaagacacttaagatatgaaaccttgaccacctgactataa
tattacacatagacaggcaaacaaagcacaccatatacaaggcccaggct
caggctcaatatacatacaattgtcaaatatgttgaagaaaaaataagaa
gccttgtatgttaataaaaaaaatccccaatgaaaaggctttccagcgat
ttccaaaagatgcaaaactattttctccagttaggcaaagacattaccaa
ggtggaagtaatcaaactttatttctactgttcaagtttccattggtaat
gactgagcatccaatgaaacttcagagacactctaatcacagcccctcct
ccaaaggccatttctatctgtctctgtttctctctaaaaggcttcacaga
ggtcaccagataccagatactgaaatctaacagctcagacaaatggtttc
tgcgaaatctgggttatgtgggttacctgagactggaaagtgggtatctg
tcattgcacacatttttagatgtatctccagctaaaaatggccattaaca
tctggcctccattttcatgtgatattttatatcatattttgaaaaaatag
cagctaataagattatcagttttcttaactccttagcttggactcactta
ctcaacaggcttccagtttacattcgacaaaaaatttcaccatgtttttc
tgggccaaggatctttagtttttcaatctctgatatcaatgtcagttatg
tgactaagttttcttccttccttcctcccttccttccatcctt
gaattcttgccctaacctccttcaaggacaaacttcattgacctggaaat
atgaggaaaataaacctctttcctcctaagctgtggtgtgggttttgtaa
cagccctacaatgaatctggagagggctaaccctacacaacatggtttct
gtacttgctcaggtactcagctctgaaagccttcttattctgcactcaat
tccaggagacaaaggcaaggaagtgagtaaacaaatcaaagccctgcatt
taaggatacaaatgtttacatgacgacaagcaaaataaaaaataaacaga
gtaaggaatcagagttacctttttgtgtccactgtctagagaagagcatt
acaggtgctcacttctgatttaccgggcgtggtggtgtacgcctttaatc
ccagcaattgagatgcagaggcaggcggatttctgagttcgaggccagcc
tggtctacagagtgagttccaggactacacagagaaaccctgtcttgggg
aaagaaaaaaaaaaaaagccagatacatatgaatgaaaactacatcaggg
tagaaaggtgacttcaatggccctgaagtgcgaaggctgtcagtgcatag
gaagcactctgaagagaatctgtgctttatgaagacttggggagacaagc
tgaggttatagcacaccatggcttcagatcatataacctgtatctcttgt
tttaattttgattcctagctatataggaagactcagtatgatgcaggatc
cttggtttacaagttccaaagagtaccatgttttctttcagggaaaagac
taagaaaggatccactggcacacagtaaccctatttataaatttcagttc
tcattgtacactttgagatctctcagcatgtatttgttttgtggagggca
ttattattattatgagcatgtatttggtgtctatgtggtattattattat
tattattattatcagttattattattattatacgtgaattatattatcat
tgtagaaaaaaagtacctttgactgagacagattcgatttattgtttcca
tttcacggatttaggagtaaacccaaggagaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150800404_150801296
seq2: B6Ng01-084P11.b_48_940 (reverse)

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAACTTAGTCACATAACT  50
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGGATGGAAGGAAGGGAGGAAGGAAGGAAGAAAACTTAGTCACATAACT  50

seq1  GACATTGATATCAGAGATTGAAAAACTAAAGATCCTTGGCCCAGAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGATATCAGAGATTGAAAAACTAAAGATCCTTGGCCCAGAAAAAC  100

seq1  ATGGTGAAATTTTTTGTCGAATGTAAACTGGAAGCCTGTTGAGTAAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAAATTTTTTGTCGAATGTAAACTGGAAGCCTGTTGAGTAAGTGA  150

seq1  GTCCAAGCTAAGGAGTTAAGAAAACTGATAATCTTATTAGCTGCTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCTAAGGAGTTAAGAAAACTGATAATCTTATTAGCTGCTATTTT  200

seq1  TTCAAAATATGATATAAAATATCACATGAAAATGGAGGCCAGATGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATATGATATAAAATATCACATGAAAATGGAGGCCAGATGTTAAT  250

seq1  GGCCATTTTTAGCTGGAGATACATCTAAAAATGTGTGCAATGACAGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTTTTAGCTGGAGATACATCTAAAAATGTGTGCAATGACAGATAC  300

seq1  CCACTTTCCAGTCTCAGGTAACCCACATAACCCAGATTTCGCAGAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTCCAGTCTCAGGTAACCCACATAACCCAGATTTCGCAGAAACCA  350

seq1  TTTGTCTGAGCTGTTAGATTTCAGTATCTGGTATCTGGTGACCTCTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGAGCTGTTAGATTTCAGTATCTGGTATCTGGTGACCTCTGTGA  400

seq1  AGCCTTTTAGAGAGAAACAGAGACAGATAGAAATGGCCTTTGGAGGAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTAGAGAGAAACAGAGACAGATAGAAATGGCCTTTGGAGGAGGG  450

seq1  GCTGTGATTAGAGTGTCTCTGAAGTTTCATTGGATGCTCAGTCATTACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATTAGAGTGTCTCTGAAGTTTCATTGGATGCTCAGTCATTACCA  500

seq1  ATGGAAACTTGAACAGTAGAAATAAAGTTTGATTACTTCCACCTTGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAACTTGAACAGTAGAAATAAAGTTTGATTACTTCCACCTTGGTAA  550

seq1  TGTCTTTGCCTAACTGGAGAAAATAGTTTTGCATCTTTTGGAAATCGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGCCTAACTGGAGAAAATAGTTTTGCATCTTTTGGAAATCGCTG  600

seq1  GAAAGCCTTTTCATTGGGGATTTTTTTTATTAACATACAAGGCTTCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCTTTTCATTGGGGATTTTTTTTATTAACATACAAGGCTTCTTAT  650

seq1  TTTTTCTTCAACATATTTGACAATTGTATGTATATTGAGCCTGAGCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCAACATATTTGACAATTGTATGTATATTGAGCCTGAGCCTGG  700

seq1  GCCTTGTATATGGTGTGCTTTGTTTGCCTGTCTATGTGTAATATTATAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTATATGGTGTGCTTTGTTTGCCTGTCTATGTGTAATATTATAGT  750

seq1  CAGGTGGTCAAGGTTTCATATCTTAAGTGTCTTTATGGAAAAAGGAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTCAAGGTTTCATATCTTAAGTGTCTTTATGGAAAAAGGAAATA  800

seq1  CATTATTTTATACAGTTTATGTGTGTGTGTGTGAGAGAGAGAGCATGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTATACAGTTTATGTGTGTGTGTGTGAGAGAGAGAGCATGTAT  850

seq1  ATGTGTGAGTGTGTATATATTGTGCATTGCTATAAAAGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGAGTGTGTATATATTGTGCATTGCTATAAAAGAATTC  893

seq1: chr3_150636540_150637627
seq2: B6Ng01-084P11.g_70_1153

seq1  GAATTCTTGCCCTAACCTCCTTCAAGGACAAACTTCATTGACCTGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCCTAACCTCCTTCAAGGACAAACTTCATTGACCTGGAAAT  50

seq1  ATGAGGAAAATAAACCTCTTTCCTCCTAAGCTGTGGTGTGGGTTTTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAAATAAACCTCTTTCCTCCTAAGCTGTGGTGTGGGTTTTGTAA  100

seq1  CAGCCCTACAATGAATCTGGAGAGGGCTAACCCTACACAACATGGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTACAATGAATCTGGAGAGGGCTAACCCTACACAACATGGTTTCT  150

seq1  GTACTTGCTCAGGTACTCAGCTCTGAAAGCCTTCTTATTCTGCACTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGCTCAGGTACTCAGCTCTGAAAGCCTTCTTATTCTGCACTCAAT  200

seq1  TCCAGGAGACAAAGGCAAGGAAGTGAGTAAACAAATCAAAGCCCTGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAGACAAAGGCAAGGAAGTGAGTAAACAAATCAAAGCCCTGCATT  250

seq1  TAAGGATACAAATGTTTACATGACGACAAGCAAAATAAAAAATAAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATACAAATGTTTACATGACGACAAGCAAAATAAAAAATAAACAGA  300

seq1  GTAAGGAATCAGAGTTACCTTTTTGTGTCCACTGTCTAGAGAAGAGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAATCAGAGTTACCTTTTTGTGTCCACTGTCTAGAGAAGAGCATT  350

seq1  ACAGGTGCTCACTTCTGATTTACCGGGCGTGGTGGTGTACGCCTTTAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGCTCACTTCTGATTTACCGGGCGTGGTGGTGTACGCCTTTAATC  400

seq1  CCAGCAATTGAGATGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAATTGAGATGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCC  450

seq1  TGGTCTACAGAGTGAGTTCCAGGACTACACAGAGAAACCCTGTCTTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAGAGTGAGTTCCAGGACTACACAGAGAAACCCTGTCTTGGGG  500

seq1  AAAGAAAAAAAAAAAAAGCCAGATACATATGAATGAAAACTACATCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAAAAAAAAGCCAGATACATATGAATGAAAACTACATCAGGG  550

seq1  TAGAAAGGTGACTTCAATGGCCCTGAAGTGCGAAGGCTGTCAGTGCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGTGACTTCAATGGCCCTGAAGTGCGAAGGCTGTCAGTGCATAG  600

seq1  GAAGCACTCTGAAGAGAATCTGTGCTTTATGAAGACTTGGGGAGACAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTCTGAAGAGAATCTGTGCTTTATGAAGACTTGGGGAGACAAGC  650

seq1  TGAGGTTATAGCACACCATGGCTTCAGATCATATAACCTGTATCTCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTATAGCACACCATGGCTTCAGATCATATAACCTGTATCTCTTGT  700

seq1  TTTAATTTTGATTCCTAGCTATATAGGAAGACTCAGTATGATGCAGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTGATTCCTAGCTATATAGGAAGACTCAGTATGATGCAGGATC  750

seq1  CTTTGGTTTACAAGTTCCAAAGAGTACCATGTTTTC-TTCAGGGAAAAGG  799
      | |||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  C-TTGGTTTACAAGTTCCAAAGAGTACCATGTTTTCTTTCAGGGAAAA-G  798

seq1  ACTAAGAAAGGATCCACTGGCACACAGTAAACCCTATTTATAAA-TTCAG  848
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  ACTAAGAAAGGATCCACTGGCACACAGT-AACCCTATTTATAAATTTCAG  847

seq1  TTCTCATTGTACAACTTTGAGATCTCTCAGCATGTATTTG-TTTGTGGAG  897
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  TTCTCATTGTAC-ACTTTGAGATCTCTCAGCATGTATTTGTTTTGTGGAG  896

seq1  GGCATTATTATTATTATGAGCATGTATTT-GTGTCTATGTGGTATTATTA  946
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGCATTATTATTATTATGAGCATGTATTTGGTGTCTATGTGGTATTATTA  946

seq1  TTATTATTATTATTATCA-TTATTATTATTATTATACAGTGAATTATATT  995
      |||||||||||||||||| |||||||||||||||||| |||||||||| |
seq2  TTATTATTATTATTATCAGTTATTATTATTATTATAC-GTGAATTATA-T  994

seq1  TATCATTGTAGGAGATAAAAGTACCTTGAACTGAGACAAGATTCGATTTA  1045
      |||||||||||   | |||||||||||  |||||||| ||||||||||||
seq2  TATCATTGTAG--AAAAAAAGTACCTTTGACTGAGAC-AGATTCGATTTA  1041

seq1  -TGTTCCCATTTTCACGGATTTAGAGTTAAAACCCAGGAGAAAT  1088
       |||| ||| ||||||||||||||   |||| || |||||||||
seq2  TTGTTTCCA-TTTCACGGATTTAGGAGTAAACCCAAGGAGAAAT  1084