BAC Information

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BAC

Clone NameB6Ng01-085B07
Chromosome3 (Build37)
Map Location 119,076,381 - 119,227,832
singlet/doubletdoublet
Overlap geneDpyd, LOC100043275
Upstream genenone
Downstream geneLOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085B07.bB6Ng01-085B07.g
ACCDH898849DH898850
length223564
definitionDH898849|Mus musculus domesticus DNA, BAC clone: B6Ng01-085B07, 5' end.DH898850|Mus musculus domesticus DNA, BAC clone: B6Ng01-085B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,076,381 - 119,076,603)(119,227,265 - 119,227,832)
sequence
ctccatctcattcatcgtctagcctgggatttatttatgtatcgcttaaa
gaaaaaacagtatatacattttattattaattgttattactaattgttca
aatactaactcaatcttgatgtcagtgctgttaggagcagcagtattaat
cttactgaattacctaagtagtgctaaaatataagatctgtctgatggtg
gttgggatttggtggtgatggct
ccgaaaaccatcatcatttgtttctaaacagatcaagagctatttaccat
cacagtgttttgtgcacagctgggtgtctggcaaatgtccaatatccatt
aacatttaaaaattagttccataatgcatcttttctagggctggagaagt
acacatggtgacacgtgttgggaaccaattacacttgcaccgccattagt
ctgcccgcattcgacttcccagtaaatgcaggctaatttagtttccagaa
tggcgtgtctaaattcatacaataacctcagagaaggccgggtatctgaa
gatggatagtgtagctgctgctagatgacaaacatgagttctcctgtgga
agcaccagggtgcatggtacaactgtgccttgagtttctgcacagttctt
gtagagcattttttctagtcagggtgagactagagggcagacacttagca
tatttcaataaccatccgtaataccactttgtaagtcagctaataacttt
acatgagtgtattctctctctctctccctctttctctctctctctctctc
tctctctctctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119076381_119076603
seq2: B6Ng01-085B07.b_51_273

seq1  CTCCATCTCATTCATCGTCTAGCCTGGGATTTATTTATGTATCGCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTCATTCATCGTCTAGCCTGGGATTTATTTATGTATCGCTTAAA  50

seq1  GAAAAAACAGTATATACATTTTATTATTAATTGTTATTACTAATTGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACAGTATATACATTTTATTATTAATTGTTATTACTAATTGTTCA  100

seq1  AATACTAACTCAATCTTGATGTCAGTGCTGTTAGGAGCAGCAGTATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAACTCAATCTTGATGTCAGTGCTGTTAGGAGCAGCAGTATTAAT  150

seq1  CTTACTGAATTACCTAAGTAGTGCTAAAATATAAGATCTGTCTGATGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGAATTACCTAAGTAGTGCTAAAATATAAGATCTGTCTGATGGTG  200

seq1  GTTGGGATTTGGTGGTGATGGCT  223
      |||||||||||||||||||||||
seq2  GTTGGGATTTGGTGGTGATGGCT  223

seq1: chr3_119227265_119227832
seq2: B6Ng01-085B07.g_70_638 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGAGAGAGAGAGAG  50

seq1  AATACACTCATGTAAAGTTATTAGCTGACTTACAAAGTGGTATTACGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACTCATGTAAAGTTATTAGCTGACTTACAAAGTGGTATTACGGAT  100

seq1  GGTTATTGAAATATGCTAAGTGTCTGCCCTCTAGTCTCACCCTGACTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGAAATATGCTAAGTGTCTGCCCTCTAGTCTCACCCTGACTAGA  150

seq1  AAAAATGCTCTACAAGAACTGTGCAGAAACTCAAGGCACAGTTGTACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCTCTACAAGAACTGTGCAGAAACTCAAGGCACAGTTGTACCAT  200

seq1  GCACCCTGGTGCTTCCACAGGAGAACTCATGTTTGTCATCTAGCAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTGGTGCTTCCACAGGAGAACTCATGTTTGTCATCTAGCAGCAGC  250

seq1  TACACTATCCATCTTCAGATACCCGGCCTTCTCTGAGGTTATTGTATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTATCCATCTTCAGATACCCGGCCTTCTCTGAGGTTATTGTATGAA  300

seq1  TTTAGACACGCCATTCTGGAAACTAAATTAGCCTGCATTTACTGGGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACACGCCATTCTGGAAACTAAATTAGCCTGCATTTACTGGGAAGT  350

seq1  CGAATGCGGGCAGACTAATGGCGGTGCAAGTGTAATTGGTTCCCAACACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGCGGGCAGACTAATGGCGGTGCAAGTGTAATTGGTTCCCAACACG  400

seq1  TGTCACCATGTGTACTTCTCCAGCCCTAGAAAAGATGCATTATGGAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCATGTGTACTTCTCCAGCCCTAGAAAAGATGCATTATGGAACTA  450

seq1  ATTTTTAAATGTTAATGGATATTGGACATTTGCCAGACACCCAGCTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAATGTTAATGGATATTGGACATTTGCCAGACACCCAGCTGTGC  500

seq1  ACAAAACACTGTGATGGTAAATAGCTCTTGATCTGTTTAGAAACAAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACACTGTGATGGTAAATAGCTCTTGATCTGTTTAGAAACAAATGA  550

seq1  TGATGGTTTTC-AGAATTC  568
      |||||||||||  ||||||
seq2  TGATGGTTTTCGGGAATTC  569