BAC Information

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BAC

Clone NameB6Ng01-085D01
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085D01.bB6Ng01-085D01.g
ACCDH898930DH898931
length1,0221,157
definitionDH898930|Mus musculus domesticus DNA, BAC clone: B6Ng01-085D01, 5' end.DH898931|Mus musculus domesticus DNA, BAC clone: B6Ng01-085D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtctaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttaccttacagaagctttgcaatttagt
gaggtcgcatttgcaattctcgatcttacagcacaagccattgctgttct
attcaggaatttttcccgtgtgcccatatttgcgaggcttttccccactt
tcccctctataagttttgctgtgtctggttttatgtggagttccttgatc
cacttagatttgaccttagtacaggaagataaaaatggataaatccgcat
tcttgtacatgataacaaccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagatcccttgtcaaagatcaaatga
ccataggtgtgtgggttcatttctgggtcttcaattctattatttggtct
acttgtctgtcgttataccagtaccatgcagtttttatcacaattgcttt
gtagtacagctttaggtcgggcatggtgattccaccaggggttcttttat
ccttgagaagagtttttgctatcctaggttttttgttattccagatgaat
ttgaagattgccctttctaattcttgaagaattgagttggaagtttgatg
gggattccattgaatctgtaggttgcttttggcaagatagccatgtttac
tataacaatcctgccaatccatgagaatgggagatctttccatcttctga
gatccttttaatttctttcttcagagacttgaagttcttatcatacagat
ctttcacttccttagttagagtcacgccaggtattttatattatttgtga
ctattgagaaggtgttgtttccctaatttctttctcagcctgttttatcc
ttgtgtacagaaagccatcgac
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctggga
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagctaaagggatctgcaccctat
agtggaacaacatatgagctacagtacccgagctctgactctagctgcat
tattatcaaagatgctagtcgccatcatggaagagaggcattgactgcac
tttatatgccagtaaggtaaatcaagcaaaaaggggatgggtggcaggaa
tatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-085D01.b_45_557 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      ||||||||||||||||| |||||||| ||||||||| |||||||||||||
seq2  CCACACACCTATGGTCATTTGATCTTTGACAAGGGATCTAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      ||||||||| ||||||||| ||| ||||| |  ||||| | |||||||||
seq2  TATCATGTACAAGAATGCGGATTTATCCATTTTTATCTTCCTGTACTAAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      ||||||||||||||||||||||||| ||||||||||||||| |||   ||
seq2  GTCAAATCTAAGTGGATCAAGGAACTCCACATAAAACCAGACACAGCAAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      ||||||||||| |||||||||||||||||| | | |||||| |||| |||
seq2  ACTTATAGAGGGGAAAGTGGGGAAAAGCCTCGCAAATATGGGCACACGGG  250

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||||||||| |||||||||||||||||||||||||||||| |||||| 
seq2  AAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATT  300

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      | |||||| |||||||  ||| ||||||||||||| |||| |||||||||
seq2  G-CAAATGCGACCTCACTAAATTGCAAAGCTTCTGTAAGGTAAAAGACAC  349

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCT  399

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAG  449

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499
      ||||| || |||||||||||||||||||||||| ||||||||||||||||
seq2  AAGGTAGACTCCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGA  498

seq1  GCTAAACAAAGAATT  514
      |||||||||||||||
seq2  GCTAAACAAAGAATT  513