BAC Information

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BAC

Clone NameB6Ng01-085M01
Chromosome3 (Build37)
Map Location 84,708,957 - 84,866,295
singlet/doubletdoublet
Overlap geneLOC624889, Fbxw7, Dear1
Upstream geneD930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4, Tmem154
Downstream geneLOC100042237, LOC100042125, Pet112l, 9930021J17Rik, Glt28d2, LOC100042265, Gm1019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085M01.bB6Ng01-085M01.g
ACCDH899335DH899336
length9751,121
definitionDH899335|Mus musculus domesticus DNA, BAC clone: B6Ng01-085M01, 5' end.DH899336|Mus musculus domesticus DNA, BAC clone: B6Ng01-085M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,865,576 - 84,866,295)(84,708,957 - 84,710,098)
sequence
gaattcaatccaagagcattacaccaggaagatcagaacaatcactagaa
ctatacccacatctacggtatgaggccatgacaagtgtccccagttgccc
aaacatttttttttaatctttgagacttcagtgcctttctgcttgggtta
ggagtcaaggaatatcctagtttggttgtgtggttcagccttctctactt
tgtgtagaaactgggaggttgcacaggtaacttctatgttgtgagactct
tgggaagccccaatttcataatttcttctcaggacctagacagtaagcag
gcagtaacatagcaagcttgaggtatggaagtcttcattgtctaagggac
cacccatccatgctagcacctgaatgacaccacaccggtttttatacaac
aagatgggagacacatggaccacagatgctggcttagagagccaatcatt
tctcttctttctatccgcaaatatcttagcaaagtcaactcaaaggaaga
ggacttattttgactcccagtttgagggtaaggtccatcaggatggtgtg
tcctagtttgctgtctattgctgtgattaacaccatgatcaaaagcaact
tgaagagttggtcgggagagaaaggggtcatttggcttacacaccccaat
catagttgatcactgaaggaagtcaaggcaggaactcaagcagaagcaga
ggtagaaaccatgaaggggtgctactcactgacttgctccccatgatgtt
ctcagtctactgtcttataccaaccaggaccagctgtccaggggtagcac
tacccacaatggactgggccctctcacaacaatcattaatcaaagaacaa
gccctactggcatacccacggtccagtctgatggaggagttaagattccc
tcttcccagaaatgtctaggcttgagtcaagttgacaaaactcaccagtg
accattgatgggggctaggggtgtc
gaattcaaggcaagacattctctcaattgcttaaaagacgttttaaaagt
tacctgtagctgtattaagacttcacatatcgaaatctattaataagaag
aaatttatactaattcagtattttattttggaggcctttacatctttgat
cattataaaacaacagaattgtacagtatcctaggctgcagtttcatttc
agtccgcaacgtggggccttagagaagagtagggctgagatgggaatcct
actggagaggcaggtgtggcagcctcatcacttaaggcaggaagattgtt
gtagatttcaggctggcctgggctgtatagtgggtgtgagtctgggatgg
actgttcagaagacttttatctttgaaaggaagaaaacgtcttccacgtt
ctcagtttgctttaaaaatgtccctgtagaagtctccagcaatcctgacc
gcagctccacttagtgtgtcattctgcagcatttctgcattaatgagaaa
aggcgtgtgttctctgttgcattggtttactctacagagcacaatggaga
ctgtccagactaagggcagtttcctgcccttggtcattgagctttccttt
tttgtgagtgtagagaagacggacagcagttttgacctaactgtgaagtg
ggcacccttaagtgctgagtataacagtggccagtggttcaaggcagact
tgtactagtttcttaaaatttctgaactcttgacaggttttttgaggtgc
tttctgtccaggtgactgacagacccatttggactaactcttagttatag
ggaacagtctctgctctttataagaaagccatgttttcctcttggggcca
ttaagttttgttcttaagggaatatgccatagcagtatagagtatattag
atactagataaacagatcggggattcttatattaagtgtcaggctaattg
tagtcataatgctgcttattaatacaaactgtttacacgttctgatagat
agtaacaggttatagggagcccaatgttcactccacaccacacttctctc
atgtttagattttcaattttccttcctggagatagttttttaatccaatt
attctgaatatgcttcccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84865576_84866295
seq2: B6Ng01-085M01.b_44_763 (reverse)

seq1  ACCCCTTCATGGTTTCTACCTCTGCTTCTGCTTGAGTTCCTGCCTTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCATGGTTTCTACCTCTGCTTCTGCTTGAGTTCCTGCCTTGACT  50

seq1  TCCTTCAGTGATCAACTATGATTGGGGTGTGTAAGCCAAATGACCCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGTGATCAACTATGATTGGGGTGTGTAAGCCAAATGACCCCTTT  100

seq1  CTCTCCCGACCAACTCTTCAAGTTGCTTTTGATCATGGTGTTAATCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCGACCAACTCTTCAAGTTGCTTTTGATCATGGTGTTAATCACAG  150

seq1  CAATAGACAGCAAACTAGGACACACCATCCTGATGGACCTTACCCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGACAGCAAACTAGGACACACCATCCTGATGGACCTTACCCTCAAA  200

seq1  CTGGGAGTCAAAATAAGTCCTCTTCCTTTGAGTTGACTTTGCTAAGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGTCAAAATAAGTCCTCTTCCTTTGAGTTGACTTTGCTAAGATAT  250

seq1  TTGCGGATAGAAAGAAGAGAAATGATTGGCTCTCTAAGCCAGCATCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGGATAGAAAGAAGAGAAATGATTGGCTCTCTAAGCCAGCATCTGTG  300

seq1  GTCCATGTGTCTCCCATCTTGTTGTATAAAAACCGGTGTGGTGTCATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGTGTCTCCCATCTTGTTGTATAAAAACCGGTGTGGTGTCATTCA  350

seq1  GGTGCTAGCATGGATGGGTGGTCCCTTAGACAATGAAGACTTCCATACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTAGCATGGATGGGTGGTCCCTTAGACAATGAAGACTTCCATACCT  400

seq1  CAAGCTTGCTATGTTACTGCCTGCTTACTGTCTAGGTCCTGAGAAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTGCTATGTTACTGCCTGCTTACTGTCTAGGTCCTGAGAAGAAAT  450

seq1  TATGAAATTGGGGCTTCCCAAGAGTCTCACAACATAGAAGTTACCTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTGGGGCTTCCCAAGAGTCTCACAACATAGAAGTTACCTGTGC  500

seq1  AACCTCCCAGTTTCTACACAAAGTAGAGAAGGCTGAACCACACAACCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCCAGTTTCTACACAAAGTAGAGAAGGCTGAACCACACAACCAAA  550

seq1  CTAGGATATTCCTTGACTCCTAACCCAAGCAGAAAGGCACTGAAGTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATATTCCTTGACTCCTAACCCAAGCAGAAAGGCACTGAAGTCTCA  600

seq1  AAGATTAAAAAAAAATGTTTGGGCAACTGGGGACACTTGTCATGGCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAAAAAAAAATGTTTGGGCAACTGGGGACACTTGTCATGGCCTCA  650

seq1  TACCGTAGATGTGGGTATAGTTCTAGTGATTGTTCTGATCTTCCTGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTAGATGTGGGTATAGTTCTAGTGATTGTTCTGATCTTCCTGGTGT  700

seq1  AATGCTCTTGGATTGAATTC  720
      ||||||||||||||||||||
seq2  AATGCTCTTGGATTGAATTC  720

seq1: chr3_84708957_84710098
seq2: B6Ng01-085M01.g_69_1189

seq1  GAATTCAAGGCAAGACATTCTCTCAATTGCTTAAAAGACGTTTTAAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCAAGACATTCTCTCAATTGCTTAAAAGACGTTTTAAAAGT  50

seq1  TACCTGTAGCTGTATTAAGACTTCACATATCGAAATCTATTAATAAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTAGCTGTATTAAGACTTCACATATCGAAATCTATTAATAAGAAG  100

seq1  AAATTTATACTAATTCAGTATTTTATTTTGGAGGCCTTTACATCTTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATACTAATTCAGTATTTTATTTTGGAGGCCTTTACATCTTTGAT  150

seq1  CATTATAAAACAACAGAATTGTACAGTATCCTAGGCTGCAGTTTCATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAAACAACAGAATTGTACAGTATCCTAGGCTGCAGTTTCATTTC  200

seq1  AGTCCGCAACGTGGGGCCTTAGAGAAGAGTAGGGCTGAGATGGGAATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGCAACGTGGGGCCTTAGAGAAGAGTAGGGCTGAGATGGGAATCCT  250

seq1  ACTGGAGAGGCAGGTGTGGCAGCCTCATCACTTAAGGCAGGAAGATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGAGGCAGGTGTGGCAGCCTCATCACTTAAGGCAGGAAGATTGTT  300

seq1  GTAGATTTCAGGCTGGCCTGGGCTGTATAGTGGGTGTGAGTCTGGGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTCAGGCTGGCCTGGGCTGTATAGTGGGTGTGAGTCTGGGATGG  350

seq1  ACTGTTCAGAAGACTTTTATCTTTGAAAGGAAGAAAACGTCTTCCACGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCAGAAGACTTTTATCTTTGAAAGGAAGAAAACGTCTTCCACGTT  400

seq1  CTCAGTTTGCTTTAAAAATGTCCCTGTAGAAGTCTCCAGCAATCCTGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTGCTTTAAAAATGTCCCTGTAGAAGTCTCCAGCAATCCTGACC  450

seq1  GCAGCTCCACTTAGTGTGTCATTCTGCAGCATTTCTGCATTAATGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCCACTTAGTGTGTCATTCTGCAGCATTTCTGCATTAATGAGAAA  500

seq1  AGGCGTGTGTTCTCTGTTGCATTGGTTTACTCTACAGAGCACAATGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGTGTTCTCTGTTGCATTGGTTTACTCTACAGAGCACAATGGAGA  550

seq1  CTGTCCAGACTAAGGGCAGTTTCCTGCCCTTGGTCATTGAGCTTTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAGACTAAGGGCAGTTTCCTGCCCTTGGTCATTGAGCTTTCCTTT  600

seq1  TTTGTGAGTGTAGAGAAGACGGACAGCAGTTTTGACCTAACTGTGAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGTGTAGAGAAGACGGACAGCAGTTTTGACCTAACTGTGAAGTG  650

seq1  GGCACCCTTAAGTGCTGAGTATAACAGTGGCCAGTGGTTCAAGGCAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCTTAAGTGCTGAGTATAACAGTGGCCAGTGGTTCAAGGCAGACT  700

seq1  TGTACTAG-TTCTTAAAATTTCTGAACTCTTGACAGGTTTTTTGAGGTGC  749
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAGTTTCTTAAAATTTCTGAACTCTTGACAGGTTTTTTGAGGTGC  750

seq1  TTTCTGTCCAGGTGACTGACAGACCCATTTGGACTAACTCTTAGTTATAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCCAGGTGACTGACAGACCCATTTGGACTAACTCTTAGTTATAG  800

seq1  GGAACAGTCTCTGCTCTTTATAAGAAAGCCATG-TTTCCTCTTGGGGCCA  848
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGAACAGTCTCTGCTCTTTATAAGAAAGCCATGTTTTCCTCTTGGGGCCA  850

seq1  TTAAGTTTTGTTCTTAAGGGAATATGCCATAAGCAGTATAGAGTATATTA  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTAAGTTTTGTTCTTAAGGGAATATGCCAT-AGCAGTATAGAGTATATTA  899

seq1  GATACTAGATAAACAGATCGGGAATTCTAATATTAAGTGTCAAGGCTAAT  948
      |||||||||||||||||||||| ||||| |||||||||||| ||||||||
seq2  GATACTAGATAAACAGATCGGGGATTCTTATATTAAGTGTC-AGGCTAAT  948

seq1  TGTAGTCAATAATTGCTGCTTATTAAATACAAACTGTTTACACGTTCCTG  998
      ||||||| |||| ||||||||||| ||||||||||||||||||||| |||
seq2  TGTAGTC-ATAA-TGCTGCTTATT-AATACAAACTGTTTACACGTT-CTG  994

seq1  AATAGATAAGTAAACAGGTTATAGGGAGCCCAATGGTTCACTCCACACCA  1048
       |||||| ||| |||||||||||||||||||||| |||||||||||||||
seq2  -ATAGAT-AGT-AACAGGTTATAGGGAGCCCAAT-GTTCACTCCACACCA  1040

seq1  CACTTTCTTTCTCATGTTTAGATTTTTTTCTATTTTTCTTTTCTTGAGAA  1098
      ||||   | |||||||||||||||||     | ||||| || || ||| |
seq2  CACT---TCTCTCATGTTTAGATTTT----CAATTTTCCTTCCTGGAG-A  1082

seq1  TAGTTTTTTTTTAAATACAATATATTCTGATTATGCTTCCCCCC  1142
      |||||||||    ||| |||| |||||||| |||||||||||||
seq2  TAGTTTTTT----AATCCAAT-TATTCTGAATATGCTTCCCCCC  1121