BAC Information

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BAC

Clone NameB6Ng01-086P04
Chromosome3 (Build37)
Map Location 41,059,281 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086P04.bB6Ng01-086P04.g
ACCDH900210DH900211
length1,0321,203
definitionDH900210|Mus musculus domesticus DNA, BAC clone: B6Ng01-086P04, 5' end.DH900211|Mus musculus domesticus DNA, BAC clone: B6Ng01-086P04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccatcttgagttctttatatatattggatattagtccc
ctatctgaattaggataggtaaagatcctttcccaatcttttgatggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcgcatttgtcaattcttgatcttacagcacaagccattgcttct
attcaggaatttttatcctgttcccatatcttcgagggtttttccttctt
tctcctcaataagtttcagtgtctctggttttatgtgaagttccttgatc
cacttagatttgaccttagtacaaggagataagtatggattgattctcat
tcttctacacgataacaaccagttgtgccagcaccaattgttgaaaatgc
tgtctttccatagtactaccggaggatccagcaatacctctcctgggcat
atatccagaagatgccccaactggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgga
ttactactcagctattaaaaagaatgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatcttgagtgaggtaacacattcacaaagg
aactcacacaatatgtactcactgataagtggatattagcccaaaaccta
ggatacccaagatataagatacaatttcctaaacacatgaaactcaagaa
aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca
aaacaccctgggaaaggagttacagagacaaagtttggagctgagatgaa
aggatggtccatgtagagactgccatatctggggatccatcccataatca
gcttccaaacgctgacaccattgcatacacta
gaattctctgtttagttctgtaccccacttttaaatagggtaatttggtt
ctttggagtctaacttcttgagttctttgtatatattggttattagccct
ctatcagatgtaggattggtaaagaccttttcccaatctgttggttgcct
ttttgtcctattgacagtgtcctttggtttgcaattttatgaggtaccat
ttgttgatttttgattttaaaagcataagctttttgcattttgcattttc
cttgttgtgtcaatattttctatgatatcttctgcccctgggattctctc
ttctatcacttttggggggggggcggaaatcaatgtcagttctttaatta
agtaattcccagatgcttgcatctatgactcctgatctcttttctagatt
ttctatctccagggctgtctccctttgtgaattctttattgtttctattt
ccatttcaagatcctcaatggctttgttcaattccttcacctgtttggtt
gtgttttcctgtaattctttaagggatttttgtgtttcctctttaagggc
ttctacctgtttacctatgttctcctgtatttctttaagggagttattta
tgtccttcttaaagtcctctatcatcatcatgagaagtgattttaatgag
agtcttgctttttcggtgtgttagggtatccaggacttgctgtggtggga
gaactgggttctaatgatgcccagtagccttggtttctgttgcttatttt
cttgtgcttgcctttcaacatctggttatctctggtgttatgtggtctta
ttgtctctgactgtggcttgttcttcctgtaagcctgtgtatcagcactc
ctgggagaccagttctctctgggagaatttgggtatggagagctgtggca
caggtcagctcccgggcacagatagaatctgaaagggtcctgtcctggct
gttccttggttcctgtgtctgatggctctggcaagtcctctgggccagga
atttgagcatatggtgttcctcactgtgttctcaggtgtgtcagcacttg
ggagaccagctctctccttgacaagatctaggtatggaagctgtgctctc
gatgtgtcagccctctggagacctggcctcttcagcgaatcgtacaaagc
ctggcctaggtagctggtcgatgatcaagtgtaccttctaggtaatgtct
aat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059281_41059737
seq2: B6Ng01-086P04.b_46_501 (reverse)

seq1  AAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATG  50
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCGTG  50

seq1  TAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAAT  100
      |||||||||| ||||  |||||  | ||||||||||||||||||||||||
seq2  TAGAAGAATGAGAATCAATCCATACTTATCTCCTTGTACTAAGGTCAAAT  100

seq1  CTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATA  150
      ||||||||||||||||||  ||||||||||||||||||||||||||||| 
seq2  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATT  150

seq1  GAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATT  200
      ||||||||||  || |||| ||| ||||||||||  |||||  |||||||
seq2  GAGGAGAAAGAAGGAAAAACCCTCGAAGATATGGGAACAGGATAAAAATT  200

seq1  CCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAAT  250
      |||| |||||  |||||||||||||||||||||||  ||||| |||||||
seq2  CCTGAATAGA--AGCAATGGCTTGTGCTGTAAGATCAAGAATTGACAAAT  248

seq1  GGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAAT  300
      | |||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  GCGACCTCATGAAACTGCAAAGCTTCTGTAAGGCAAAAGACACTGTCAAT  298

seq1  AAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAA  349
      |||||||||||| || ||| ||||||||||||||||||||||||||||||
seq2  AAGACAAAAAGGCCATCAAAAGATTGGGAAAGGATCTTTACCTATCCTAA  348

seq1  ATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGG  399
       |||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  TTCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGATGGTGG  398

seq1  ATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAAC  449
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAAC  448

seq1  AAAGAATT  457
      ||||||||
seq2  AAAGAATT  456