BAC Information

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BAC

Clone NameB6Ng01-087H12
Chromosome3 (Build37)
Map Location 31,599,925 - 31,600,785
singlet/doubletsinglet
Overlap genenone
Upstream geneSamd7, Tloc1, Gpr160, Phc3, LOC100040809, Prkci, Skil, Cldn11, Slc7a14, LOC625125
Downstream geneKcnmb2, LOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087H12.bB6Ng01-087H12.g
ACCDH900586DH900587
length9391,099
definitionDH900586|Mus musculus domesticus DNA, BAC clone: B6Ng01-087H12, 5' end.DH900587|Mus musculus domesticus DNA, BAC clone: B6Ng01-087H12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacaagatgatgctgtcaaagttgcactgcatcctaagaaaat
tgatatctggcatggtggcacatgcctttaatcccagcacttgggaggca
gaggcaggcagatttctgggttcgaggcttgcctggtctacaaagtgagt
tccaggacagccagggctatacagagaaaccctgtctagaaaaacaacaa
aaaaagatatctaattaaacagattccctaaactatgtataggtagttgc
atcactagtcgtatctatttttatagccaccctcacttttattgacatca
atgttctattgtcttcagatgtcatagtgaagctcttcccattcttagtt
ttctttttttttttttttttttccattttttattaggtatttagctcatt
tacatttccaatgctataccaaaagtcccccttacccacccacccccact
cccctacccacccactccccccctttggccctggcgttcccctgtaccgg
ggcacacaaagtctgcgtgtccaatgggcctctctttccagtgatggccg
actaggccatcttttgatacatatgcagctagagtcaagagctcaggggt
actggttagttcataatgttgttccacctatagggttgaagatcccttta
gctccttgggtactttctctagctcctccattgggagccctgtgatccat
ccattagctgactgtgagcatccacttctgtgtttgctaggccccggcat
agtctcacaagagacagctacatctgggtcctttcagtaaaatcttgcta
gtgtatgcaatggtgtcagcatttgggaagctgattatggggtggatccc
tggatatggcagtctctacatggtgcatcctttcatctcagctccatact
ttgtttctgtaactccttccatgggtgtttgttcccact
gaattcatgttctcttagtgtctgtataacatctgtccaggctattctgg
ctttcatagtctctggtgaaaaatctggtgtaattctcataggcttgcct
ttatatgttacttgacctttttcccttactgcttttagtattctatcttt
atttagtgcatttaatgttctgattattatgtgtcgggaggaatttcttt
tctggtccagtctatttggagttctgtaggcttcttgtatgttcatgggc
atctctttctttagatttgggaagttttcttcaataattttgttaaagat
gtttgctggtcctttgagttgaaaatcttcattctcatccactcctatta
tccgtaggtttggtcttctcattgtgtcctggatttcctggatattttga
gttaggatctttttgcattttccattttctttgattgttgtgccgatgtt
ctctatggaatcttctgcacctgagattctctcttgcatctcttgtattc
tgttgctgatgctggcatctatggttccagatttctttcctagggtttct
atctccagcgttgcctcactttgggttttctttattgtgtctacttccct
ttttaggtctagtatggttttgttcatttctatcacctgtttcaatgtgt
ttttcctgtttttctataaggacttctacctgtttgattgtgttttcctg
tttttctttaaggacttgtaactctttagcagtgttctcctgtatttcct
taaatgagttattaaattccttctttatgtcctctaccatcatcatgaga
aatgcttttaaatcaggtctaccttttcagtgtgttaggatgtcctggac
tgggcgaagtgggagtgctgggttctgatgatggtgagtggtcttgggtt
cctgttagaaggattcttacgttacctttcaccatctggcattctctggg
agttagtgtaaagtgtctttgtttagaagattgttcctctgtgttttgta
cctcttatctgcagacggtggggagactagcttctctcctctgagtttca
tggtcagagcagtctctgcaggcaagcttctctctttcagggaaggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_31599925_31600785
seq2: B6Ng01-087H12.b_45_906

seq1  GAATTCTCACAAGATGATGCTGTCAAAGTTGCACTGCATCCTAAGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAAGATGATGCTGTCAAAGTTGCACTGCATCCTAAGAAAAT  50

seq1  TGATATCTGGCATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTGGCATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCA  100

seq1  GAGGCAGGCAGATTTCTGGGTTCGAGGCTTGCCTGGTCTACAAAGTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCAGATTTCTGGGTTCGAGGCTTGCCTGGTCTACAAAGTGAGT  150

seq1  TCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTAGAAAAACAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTAGAAAAACAACAA  200

seq1  AAAAAGATATCTAATTAAACAGATTCCCTAAACTATGTATAGGTAGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATATCTAATTAAACAGATTCCCTAAACTATGTATAGGTAGTTGC  250

seq1  ATCACTAGTCGTATCTATTTTTATAGCCACCCTCACTTTTATTGACATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGTCGTATCTATTTTTATAGCCACCCTCACTTTTATTGACATCA  300

seq1  ATGTTCTATTGTCTTCAGATGTCATAGTGAAGCTCTTCCCATTCTTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTATTGTCTTCAGATGTCATAGTGAAGCTCTTCCCATTCTTAGTT  350

seq1  TTCTTTTTTTTTTTTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTTTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATT  400

seq1  TACATTTCCAATGCTATACCAAAAGTCCCCCTTACCCACCCACCCCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCAATGCTATACCAAAAGTCCCCCTTACCCACCCACCCCCACT  450

seq1  CCCCTACCCACCCACTCCCCCCCTTTGGCCCTGGCGTTCCCCTGTACCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCCACCCACTCCCCCCCTTTGGCCCTGGCGTTCCCCTGTACCGG  500

seq1  GGCACACAAAGTCTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACAAAGTCTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  550

seq1  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCAGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCAGGGGT  600

seq1  ACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGAAGATCCCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGAAGATCCCTTTA  650

seq1  GCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCAT  700

seq1  CCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCAT  750

seq1  AGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAGTAAAATCTTGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAGTAAAATCTTGCTA  800

seq1  GTGTATGCAATGGTGTCAGCATTT-GGAAGCTGATTATGGGGTGGATCCC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGTATGCAATGGTGTCAGCATTTGGGAAGCTGATTATGGGGTGGATCCC  850

seq1  TGGATATGGCAG  861
      ||||||||||||
seq2  TGGATATGGCAG  862