MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-090O16
Chromosome	3 (Build37)
Map Location	9,184,177 - 9,285,835
singlet/doublet	doublet
Overlap gene	Zbtb10
Upstream gene	LOC633072, LOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52, LOC100041389, LOC667886
Downstream gene	Zfp704, Pag1, LOC621504, Fabp5, LOC100041480, Pmp2, Fabp9, Fabp4, 1700008G05Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC633072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC545500 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 156 ESTs, 5 Proteins pseudo : _no_value

name	LOC620966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 42 ESTs, 5 Proteins pseudo : _no_value

name	Stmn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20257 MGI:98241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hey1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15213 MGI:1341800
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Mrps28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66230 MGI:1913480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpd52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	LOC100041389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667886 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 2 Proteins pseudo : _no_value

name	Zbtb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229055 MGI:2139883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 119 ESTs, 1 Protein

name	Zfp704 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170753 MGI:2180715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94212 MGI:2443160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC621504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Fabp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16592 MGI:101790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041480 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 6 Proteins

name	Pmp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18857 MGI:102667
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fabp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21884 MGI:1194881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fabp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11770 MGI:88038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700008G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75497 MGI:1922747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stmn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130361 GeneID:20257 MGI:98241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stathmin-like 2 transcript_id : NM_025285.2

name	Hey1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606331 GeneID:15213 MGI:1341800
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy/enhancer-of-split related with YRPW motif 1 transcript_id : NM_010423.2

name	LOC100039504 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250594 GeneID:100039504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039504 transcript_id : XM_001473019.1

name	Mrps28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981287 GeneID:66230 MGI:1913480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S28 transcript_id : NM_025434.2

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608203 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_009412.2

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608213 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025263.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608204 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025264.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608197 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025262.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608193 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025261.1

name	LOC100041389 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250619 GeneID:100041389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041389 transcript_id : XM_001476491.1

name	Zbtb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250597 GeneID:229055 MGI:2139883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 119 ESTs, 1 Protein product : zinc finger and BTB domain containing 10, transcript variant 1 transcript_id : XM_485202.5

name	Zfp704 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875369 GeneID:170753 MGI:2180715
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 704 transcript_id : NM_133218.1

name	Pag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802897 GeneID:94212 MGI:2443160
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoprotein associated with glycosphingolipid microdomains 1 transcript_id : NM_053182.3

name	LOC621504 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250599 GeneID:621504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to peptidylprolyl isomerase D transcript_id : XM_001473248.1

name	Fabp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130073 GeneID:16592 MGI:101790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 5, epidermal transcript_id : NM_010634.2

name	LOC100041480 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250621 GeneID:100041480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 6 Proteins product : similar to Myef2 protein transcript_id : XM_001476587.1

name	Pmp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131160 GeneID:18857 MGI:102667
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peripheral myelin protein 2 transcript_id : NM_001030305.2

name	Fabp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254573 GeneID:21884 MGI:1194881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 9, testis transcript_id : NM_011598.2

name	Fabp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14149634 GeneID:11770 MGI:88038
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 4, adipocyte transcript_id : NM_024406.1

name	1700008G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037414 GeneID:75497 MGI:1922747
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700008G05 gene transcript_id : NM_029310.1

name	Stmn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384630 CCDS:CCDS17231.1 GeneID:20257 MGI:98241
definition	GO_component : GO:0030426 - growth cone [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : superiorcervical ganglia, neural specific 10 product : stathmin-like 2 protein_id : NP_079561.1

name	Hey1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606332 CCDS:CCDS17232.1 GeneID:15213 MGI:1341800
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IGI] codon_start : 1 note : Hairy/E(spl)-related with YRPW motif 1 product : hairy/enhancer-of-split related with YRPW motif 1 protein_id : NP_034553.2

name	LOC100039504 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250595 GeneID:100039504
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473069.1

name	Mrps28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981288 CCDS:CCDS17233.1 GeneID:66230 MGI:1913480
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial ribosomal protein S28 protein_id : NP_079710.2

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678407 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 5 is encoded by transcript variant 5 product : tumor protein D52 isoform 5 protein_id : NP_033438.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608214 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : tumor protein D52 isoform 3 protein_id : NP_001020434.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608205 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 4 is encoded by transcript variant 4 product : tumor protein D52 isoform 4 protein_id : NP_001020435.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608198 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : tumor protein D52 isoform 2 protein_id : NP_001020433.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608194 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : tumor protein D52 isoform 1 protein_id : NP_001020432.1

name	LOC100041389 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250620 GeneID:100041389
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476541.1

name	Zbtb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250598 GeneID:229055 MGI:2139883
definition	codon_start : 1 product : zinc finger and BTB domain containing 10 isoform 1 protein_id : XP_485202.5

name	Zfp704 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875370 CCDS:CCDS17234.1 GeneID:170753 MGI:2180715
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : glucocorticoid induced gene 1 protein_id : NP_573481.1

name	Pag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543456 CCDS:CCDS17235.1 GeneID:94212 MGI:2443160
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : phosphoprotein-associated with GEMs; phosphoprotein associated with glycosphingolipid-enriched microdomains; phosphoprotein transmembrane adaptor 1 product : phosphoprotein associated with glycosphingolipid microdomains 1 protein_id : NP_444412.2

name	LOC621504 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250600 GeneID:621504
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473298.1

name	Fabp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754450 GeneID:16592 MGI:101790
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006006 - glucose metabolism [Evidence IMP]; GO:0015758 - glucose transport [Evidence IMP]; GO:0006629 - lipid metabolism [Evidence IMP]; GO:0006656 - phosphatidylcholine biosynthesis [Evidence IGI]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : keratinocyte lipid binding protein; Fabpe E-FABP product : fatty acid binding protein 5, epidermal protein_id : NP_034764.1

name	LOC100041480 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250622 GeneID:100041480
definition	codon_start : 1 product : similar to Myef2 protein protein_id : XP_001476637.1

name	Pmp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71892436 CCDS:CCDS17236.1 GeneID:18857 MGI:102667
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : peripheral myelin protein 2 protein_id : NP_001025476.1

name	Fabp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254574 CCDS:CCDS17237.1 GeneID:21884 MGI:1194881
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : testis lipid binding protein product : fatty acid binding protein 9, testis protein_id : NP_035728.2

name	Fabp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14149635 CCDS:CCDS17238.1 GeneID:11770 MGI:88038
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IMP] GO_process : GO:0042632 - cholesterol homeostasis [Evidence IMP]; GO:0001816 - cytokine production [Evidence IMP]; GO:0006469 - negative regulation of protein kinase activity [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence IMP]; GO:0050729 - positive regulation of inflammatory response [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : adipocyte protein aP2; lipid binding protein-like product : fatty acid binding protein 4, adipocyte protein_id : NP_077717.1

name	1700008G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037415 CCDS:CCDS17239.1 GeneID:75497 MGI:1922747
definition	GO_function : GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : similar to Myelin P2 protein protein_id : NP_083586.1

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 3 pseudo : _no_value

name	LOC545500 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250593 GeneID:545500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 156 ESTs, 5 Proteins product : similar to ubiquitin specific protease 1 pseudo : _no_value transcript_id : XR_030927.1

name	LOC620966 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250618 GeneID:620966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 42 ESTs, 5 Proteins product : similar to Expressed sequence AI840826 pseudo : _no_value transcript_id : XR_032665.1

name	LOC667886 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250596 GeneID:667886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_031014.1

clone name	MSMg01-408I08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-098E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-097O15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319J20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-090O16.b	B6Ng01-090O16.g
ACC	DH903091	DH903092
length	991	1,110
definition	DH903091\|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O16, 5' end.	DH903092\|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O16, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(9,184,177 - 9,185,175)	(9,284,707 - 9,285,835)
sequence	ttgacgtgggagactgtctctcgctatttctattttcatatggcgagccc tttcttttgggttattgaagttacaacatcacagaatcccaaaatgtgtc cgtatctcatccctgccttggaaggacagggacagtcttttgttgttgtt acttatttgtttattttggtgggaggaggtctgccctctcccgaggccct gtagttgatcaaccaattccttcaactcttcctgcatgcgggccatgtag ttcgtgggggtagggaaaggatgggcagagacgtttgtgtatagaaagaa gaagaaactgggttagagacagatgaggcagcaaagtgcttaatgatatg taaagactcatgttggacagggagtgaaaaacacacagatgatcttcaga acacaacaaaacacacttgaaaaccacatccagtctcagtgcaccgctgg ccaatgcaaaatgcccagcaagccaggtacacccagcagcctaatagaaa gactgttcccttttctgttcattaaattgcaggactatcctatttctgtt tgtcaaattagttggcttttgggtttttttggtttttgggtgtttttgtt tttgtttttgagacagggtctcacttatatggctcagggtggccttgaat tcactatgtagatcaggctggcctcaaacacacagagatctgtcagcctc tgcctcctgagtgttggtataaaaggcatgtagcaccatgcctggctttc aaatttagtgtaaagttatttaaaagctgggtatggtggcacagcttgta atcccaactcttaggtaaaggcaagatcagaaatttaagataagctttgg ctatatggggagtttgaggcctgcgttggctgcacgaaaccctgtctcac ataaacaaaccaacccactacaaataaatgaagcatttgtagtaatgaat ttttttttcataatttcctattttataaagctatgtggggg	gaattcagaggctgggtgggacacatgaccttgagtctgaggtgaggtct gcccagcaaagaggcaactctctaagtaaattttcaaaggcttgaaattt gtaatcttatatatttacttgtttacaagttgatgttctgtctaataaac agtatatatgaggtagtgcttcacctttgagtctcgatcccatttccaag agaaacgattagaagtgattagagggaacttttcagtgtttcttaaatcc tgtaaaaattctaaaagtataatgaataagaattcttgcaaagaggtagc tttatttcttacttccataccaaggaaccattagcaaccctcctcagact ctgtaatccaaactcgtaaactccaagtacaaaggcatctatctcagtgt ctaaccttccaacggtggttcccttacccagtgagtctaaactagcaccc ctgcaaataaatcacaattaagggtcaataaaattcacaaagccagaagc agtttagtgctcacaagtttatattttatgtttgataaagattcttgtgt attttctaaatacacagacaaacaggttttggaagtttacatacatgtct caggacatttaaatattaggtaggtaaattacatttaaaaaagaaaattg gtctttgtaaaagatcttgccagagagcttttacaaacagcaggcagaag agttgtttacagtgtttaggatgctgcttctcccagatcataatggcctc aatcatccctttcttaacccccaaattttgttctcaatagctagtgtatt ccaaatttactgcccagtgccctcaaattcagggcaagaaaacatctttc aaagtgtgcttatccctaacatgttttaaactacctagttcaacttcact tgaggactgggatacagcagatagggaagaaacaaaataaataatcttac tttaatcctaaactaggaaacacctgtagtctactgtgtagatggggtac catagttagctaggatccgggtgtgacgcccacaggcttggggcttctat ctacttctcatttttcactatcctttaattaaggtgactatcaggccact ccagaggatg
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr3_9184177_9185175
seq2: B6Ng01-090O16.b_60_1050

seq1  TTGACGTGGGAGACTGTCTCTCGCTATTTCTATTTTCATATGGCGAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACGTGGGAGACTGTCTCTCGCTATTTCTATTTTCATATGGCGAGCCC  50

seq1  TTTCTTTTGGGTTATTGAAGTTACAACATCACAGAATCCCAAAATGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGGGTTATTGAAGTTACAACATCACAGAATCCCAAAATGTGTC  100

seq1  CGTATCTCATCCCTGCCTTGGAAGGACAGGGACAGTCTTTTGTTGTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCATCCCTGCCTTGGAAGGACAGGGACAGTCTTTTGTTGTTGTT  150

seq1  ACTTATTTGTTTATTTTGGTGGGAGGAGGTCTGCCCTCTCCCGAGGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTGTTTATTTTGGTGGGAGGAGGTCTGCCCTCTCCCGAGGCCCT  200

seq1  GTAGTTGATCAACCAATTCCTTCAACTCTTCCTGCATGCGGGCCATGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGATCAACCAATTCCTTCAACTCTTCCTGCATGCGGGCCATGTAG  250

seq1  TTCGTGGGGGTAGGGAAAGGATGGGCAGAGACGTTTGTGTATAGAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGGGGGTAGGGAAAGGATGGGCAGAGACGTTTGTGTATAGAAAGAA  300

seq1  GAAGAAACTGGGTTAGAGACAGATGAGGCAGCAAAGTGCTTAATGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACTGGGTTAGAGACAGATGAGGCAGCAAAGTGCTTAATGATATG  350

seq1  TAAAGACTCATGTTGGACAGGGAGTGAAAAACACACAGATGATCTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTCATGTTGGACAGGGAGTGAAAAACACACAGATGATCTTCAGA  400

seq1  ACACAACAAAACACACTTGAAAACCACATCCAGTCTCAGTGCACCGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACAAAACACACTTGAAAACCACATCCAGTCTCAGTGCACCGCTGG  450

seq1  CCAATGCAAAATGCCCAGCAAGCCAGGTACACCCAGCAGCCTAATAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCAAAATGCCCAGCAAGCCAGGTACACCCAGCAGCCTAATAGAAA  500

seq1  GACTGTTCCCTTTTCTGTTCATTAAATTGCAGGACTATCCTATTTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTCCCTTTTCTGTTCATTAAATTGCAGGACTATCCTATTTCTGTT  550

seq1  TGTCAAATTAGTTGGCTTTTGGGTTTTTTTGGTTTTTGGGTGTTTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATTAGTTGGCTTTTGGGTTTTTTTGGTTTTTGGGTGTTTTTGTT  600

seq1  TTTGTTTTTGAGACAGGGTCTCACTTATATGGCTCAGGGTGGCCTTGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGAGACAGGGTCTCACTTATATGGCTCAGGGTGGCCTTGAAT  650

seq1  TCACTATGTAGATCAGGCTGGCCTCAAACACACAGAGATCTGTCAGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGTAGATCAGGCTGGCCTCAAACACACAGAGATCTGTCAGCCTC  700

seq1  TGCCTCCTGAGTGTTGGTATAAAAGGCATGTAGCACCATGCCTGGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGAGTGTTGGTATAAAAGGCATGTAGCACCATGCCTGGCTTTC  750

seq1  AAATTTAGTGTAAAGTTATTTAAAAGCTGGGTATGGTGGCACAGGCTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAATTTAGTGTAAAGTTATTTAAAAGCTGGGTATGGTGGCACA-GCTTGT  799

seq1  AATCCCAACTCTTAGGTAAAGGCAAGATCAGAAATTTAAGATAAGCTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAACTCTTAGGTAAAGGCAAGATCAGAAATTTAAGATAAGCTTTG  849

seq1  GCTATATGGGGAGTTTGAGGCCTGCGTTGGCTGCACGAAACCCTGTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATGGGGAGTTTGAGGCCTGCGTTGGCTGCACGAAACCCTGTCTCA  899

seq1  ACAATAAACAAACCAACCAACTAACAAATAAATGAAAGCATTTTGTAGTA  950
         ||||||||||||||| ||| ||||||||||| ||||| |||||||||
seq2  --CATAAACAAACCAACCCACT-ACAAATAAATG-AAGCA-TTTGTAGTA  944

seq1  ATGAATTTTTTTTTCATAATTTCCTATTTTTATAAAAGCTATGTGGGGG  999
      |||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  ATGAATTTTTTTTTCATAATTTCCTA-TTTTAT-AAAGCTATGTGGGGG  991

seq1: chr3_9284707_9285835
seq2: B6Ng01-090O16.g_69_1178 (reverse)

seq1  CATCCTCTGTGAGTGGCTGGGATAGTTTCACTTAATTTTAAAAGGATGGT  50
      ||||||||| |||||||   ||||||  | |||||||   ||||||| | 
seq2  CATCCTCTG-GAGTGGC-CTGATAGTCAC-CTTAATT---AAAGGATAG-  43

seq1  TTTACAATATGAAGAAGTAGATAGAAGCCCC-AGCTTGTGTGCCGTTCAC  99
        |  || ||| ||||||||||||||||||| ||| |||| ||   ||||
seq2  --TGAAAAATG-AGAAGTAGATAGAAGCCCCAAGCCTGTGGGC--GTCAC  88

seq1  ACCCGGATCCTTAAGCTTAACTATGGTACCCAATCTACACAGTTAGAACT  149
      |||||||||||  ||| |||||||||||||| |||||||||| ||| |||
seq2  ACCCGGATCCT--AGC-TAACTATGGTACCCCATCTACACAG-TAG-ACT  133

seq1  AACAGGTGTTTTCTTAGTTTAGGATTTAAAGTAGGATTATTTATTTTGTT  199
       ||||||| |||| |||||||||| |||||||| ||||||||||||||||
seq2  -ACAGGTG-TTTCCTAGTTTAGGA-TTAAAGTAAGATTATTTATTTTGTT  180

seq1  TCTTCCCTATCTGCTGTATCCCAGTCTTCAAGTGAAGTTGAACTAGGTAG  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTTCCCTATCTGCTGTATCCCAGTCCTCAAGTGAAGTTGAACTAGGTAG  230

seq1  TTTAAAACATGTTAGGGATAAGCACACTTTGAAAGATGTTTTCTTGCCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACATGTTAGGGATAAGCACACTTTGAAAGATGTTTTCTTGCCCT  280

seq1  GAATTTGAGGGCACTGGGCAGTAAATTTGGAATACACTAGCTATTGAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAGGGCACTGGGCAGTAAATTTGGAATACACTAGCTATTGAGAA  330

seq1  CAAAATTTGGGGGTTAAGAAAGGGATGATTGAGGCCATTATGATCTGGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTGGGGGTTAAGAAAGGGATGATTGAGGCCATTATGATCTGGGA  380

seq1  GAAGCAGCATCCTAAACACTGTAAACAACTCTTCTGCCTGCTGTTTGTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGCATCCTAAACACTGTAAACAACTCTTCTGCCTGCTGTTTGTAA  430

seq1  AAGCTCTCTGGCAAGATCTTTTACAAAGACCAATTTTCTTTTTTAAATGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCTGGCAAGATCTTTTACAAAGACCAATTTTCTTTTTTAAATGT  480

seq1  AATTTACCTACCTAATATTTAAATGTCCTGAGACATGTATGTAAACTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCTACCTAATATTTAAATGTCCTGAGACATGTATGTAAACTTCC  530

seq1  AAAACCTGTTTGTCTGTGTATTTAGAAAATACACAAGAATCTTTATCAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGTTTGTCTGTGTATTTAGAAAATACACAAGAATCTTTATCAAA  580

seq1  CATAAAATATAAACTTGTGAGCACTAAACTGCTTCTGGCTTTGTGAATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATATAAACTTGTGAGCACTAAACTGCTTCTGGCTTTGTGAATTT  630

seq1  TATTGACCCTTAATTGTGATTTATTTGCAGGGGTGCTAGTTTAGACTCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCCTTAATTGTGATTTATTTGCAGGGGTGCTAGTTTAGACTCAC  680

seq1  TGGGTAAGGGAACCACCGTTGGAAGGTTAGACACTGAGATAGATGCCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAGGGAACCACCGTTGGAAGGTTAGACACTGAGATAGATGCCTTT  730

seq1  GTACTTGGAGTTTACGAGTTTGGATTACAGAGTCTGAGGAGGGTTGCTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGGAGTTTACGAGTTTGGATTACAGAGTCTGAGGAGGGTTGCTAA  780

seq1  TGGTTCCTTGGTATGGAAGTAAGAAATAAAGCTACCTCTTTGCAAGAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTTGGTATGGAAGTAAGAAATAAAGCTACCTCTTTGCAAGAATT  830

seq1  CTTATTCATTATACTTTTAGAATTTTTACAGGATTTAAGAAACACTGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCATTATACTTTTAGAATTTTTACAGGATTTAAGAAACACTGAAA  880

seq1  AGTTCCCTCTAATCACTTCTAATCGTTTCTCTTGGAAATGGGATCGAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCTCTAATCACTTCTAATCGTTTCTCTTGGAAATGGGATCGAGAC  930

seq1  TCAAAGGTGAAGCACTACCTCATATATACTGTTTATTAGACAGAACATCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTGAAGCACTACCTCATATATACTGTTTATTAGACAGAACATCA  980

seq1  ACTTGTAAACAAGTAAATATATAAGATTACAAATTTCAAGCCTTTGAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAAACAAGTAAATATATAAGATTACAAATTTCAAGCCTTTGAAAA  1030

seq1  TTTACTTAGAGAGTTGCCTCTTTGCTGGGCAGACCTCACCTCAGACTCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAGAGAGTTGCCTCTTTGCTGGGCAGACCTCACCTCAGACTCAA  1080

seq1  GGTCATGTGTCCCACCCAGCCTCTGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  GGTCATGTGTCCCACCCAGCCTCTGAATTC  1110

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information