BAC Information

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BAC

Clone NameB6Ng01-091A15
Chromosome3 (Build37)3 (Build37)
Map Location 41,059,221 - 41,059,73726,406,639 - 26,407,019
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091A15.bB6Ng01-091A15.g
ACCDH903181DH903182
length997375
definitionDH903181|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A15, 5' end.DH903182|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,221 - 41,059,737)(26,406,639 - 26,407,019)
sequence
gaattctttgtttagctctgagacacattttttaatggggttatttgatt
ttctggagcccaccttcttgagttctttatatatattggatattaatccc
ctatctgatttagggtaggaaaagatcctttcctaatctgttggtggcct
ttttgtcttattgagggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttgtcgattcttaatcttacagcacaagccattgctgtt
ctattcagaaatttttcccctgtacccatatcttcgagggttttccctac
tttctcctctataagtttcagtgtctctggttttagtggagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggatcaattcgaa
ttcttctgcatgatactcaccagttgtaccagcaccatttgttgaaaatg
ctgtcttttttccactggatggtttttgctcccttgttaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcgctataccagtaccatgcagtttttatcacaatcgct
ctgtagtaaatctttaggtcaggcatggtgattccaccagaggttctgtt
atcattgagaagagtttttgctatcctagatttttttgttattccagatg
aattttcagattgccctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtaggttgcttttggcaagatagccattt
ttactatattgatcctacaaatccatgagcatgggatctttccatcttct
gagatcttctttaatttctctctacttcattgaagctgtttatcagactt
aggagttcttgggtggaattcttagggtcacttatatatactatcatatc
atctgcaaaagtgatattttgacttcttcctttccattgtatccctt
tcttgaaagagttgttttatttgtttggtggacttccttgatgataatct
cgctttgaagtaattactttgtttagaaaggcgtgtgtagtgtgctcagt
attcacaatgagtaaatgactgaacatacatcttcccttggcttgtaatg
tgcttaaaactaattgcagcaactgagctttggggcggaagaagcatcaa
gggtgcatagtgtttgcagcattgctacccaggtagcagtcttgtccaaa
tcttcttctaatgacctccttaaaattacgaatcccaaagaaatgcttca
gctgcttccagtatttgaaatctgctttactatgcagaaatctggttttt
tattataagtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059221_41059737
seq2: B6Ng01-091A15.b_44_560 (reverse)

seq1  AATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50
      || ||||||||||||||||||||||||||  |||||||||| ||||||||
seq2  AACCCACACACCTATGGTCACTTGATCTTTAACAAGGGAGCAAAAACCAT  50

seq1  CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGT  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGTACAACTGGT  100

seq1  TGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACT  150
         ||||||| |||||||| |||||||||||| |||||||||||||||||
seq2  GAGTATCATGCAGAAGAATTCGAATTGATCCATTCCTATCTCCTTGTACT  150

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACT  200
      |||||||||||||||||||||||||||| |||| ||||||||||||||||
seq2  AAGGTCAAATCTAAGTGGATCAAGGAACTCCAC-TAAAACCAGAGACACT  199

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAG  250
      ||||||||||||||||||||| ||||||| ||| ||||||||||  ||||
seq2  GAAACTTATAGAGGAGAAAGTAGGGAAAACCCTCGAAGATATGGGTACAG  249

seq1  GGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGA  300
      |||||||||| ||| ||||||||||||||||||||||||||||||| |||
seq2  GGGAAAAATTTCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATTAAGA  299

seq1  ATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGA  350
      || ||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  ATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAGGCAAAAGA  349

seq1  CACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTA  399
      |||| ||||||||||||||||| |||||||||||| ||||||||||||| 
seq2  CACCCTCAATAAGACAAAAAGGCCACCAACAGATTAGGAAAGGATCTTTT  399

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTC  449
      |||| |||||||||||||||||| ||||||||||||||||| ||||||||
seq2  CCTACCCTAAATCAGATAGGGGATTAATATCCAATATATATAAAGAACTC  449

seq1  AAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTC  499
      ||||||||||  |||||||||||||||||||||||||||||||| | |||
seq2  AAGAAGGTGGGCTCCAGAAAATCAAATAACCCCATTAAAAAATGTGTCTC  499

seq1  AGAGCTAAACAAAGAATT  517
      ||||||||||||||||||
seq2  AGAGCTAAACAAAGAATT  517

seq1: chr3_26406639_26407019
seq2: B6Ng01-091A15.g_68_448 (reverse)

seq1  CACACACACACACACACTTATAATAAAAAACCAGATTTCTGCATAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACTTATAATAAAAAACCAGATTTCTGCATAGTAAA  50

seq1  GCAGATTTCAAATACTGGAAGCAGCTGAAGCATTTCTTTGGGATTCGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTCAAATACTGGAAGCAGCTGAAGCATTTCTTTGGGATTCGTAA  100

seq1  TTTTAAGGAGGTCATTAGAAGAAGATTTGGACAAGACTGCTACCTGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGAGGTCATTAGAAGAAGATTTGGACAAGACTGCTACCTGGGTA  150

seq1  GCAATGCTGCAAACACTATGCACCCTTGATGCTTCTTCCGCCCCAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCTGCAAACACTATGCACCCTTGATGCTTCTTCCGCCCCAAAGCT  200

seq1  CAGTTGCTGCAATTAGTTTTAAGCACATTACAAGCCAAGGGAAGATGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTGCAATTAGTTTTAAGCACATTACAAGCCAAGGGAAGATGTAT  250

seq1  GTTCAGTCATTTACTCATTGTGAATACTGAGCACACTACACACGCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTCATTTACTCATTGTGAATACTGAGCACACTACACACGCCTTTC  300

seq1  TAAACAAAGTAATTACTTCAAAGCGAGATTATCATCAAGGAAGTCCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAGTAATTACTTCAAAGCGAGATTATCATCAAGGAAGTCCACCA  350

seq1  AACAAATAAAACAACTCTTTCAAGAGAATTC  381
      |||||||||||||||||||||||||||||||
seq2  AACAAATAAAACAACTCTTTCAAGAGAATTC  381