BAC Information

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BAC

Clone NameB6Ng01-091G16
Chromosome3 (Build37)
Map Location 110,782,193 - 110,941,621
singlet/doubletdoublet
Overlap geneLOC100043190
Upstream geneNtng1, LOC100043181, LOC100043183, Prmt6
Downstream geneLOC668712, LOC625585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091G16.bB6Ng01-091G16.g
ACCDH903448DH903449
length1,1811,126
definitionDH903448|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G16, 5' end.DH903449|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,940,462 - 110,941,621)(110,782,193 - 110,783,346)
sequence
gaattcacccgggacacaattcccaaattgcctattatacttttcaactt
aacttgaatgtctatttcttcaatggagaaaatgtattagttcagtctct
atgagccctcatgagcccaggttatagattttcctgacccttcagattcc
cacaatttttcctccccttcttccacaggagtcccaagctcaacctaatg
tttatctgtggatttctgcctctgtttccatcaactgctggatgaagctg
ctcagtgtcctctgagtgacaattatgctatacatacaagagtatcatga
atagtgtcctgagttggctgtgtcccatggggcatgtctcaatttgggcc
agttttcgtcggccatcccctcaaacgttgcttcatttttatccctgcac
atcttgtaggcaggataaattgtgggttgaagttttcgtgggtggattgg
tatcctgctccacagctggaattccttcctggctgcatgtggtgaccaca
ttagcctctatctcaccactgataggattctccatttcttagaagtaaag
atgcaggtggtcctgcatttgtttggaaaacatacagaacctctgagcta
ctacagtcttaaactgtctttggcaaagagaatgagagaacagggagttc
tttattctaattctactacatctgtgaaaaatatgtaagtttgaattatt
cactgtgtttgataatgatcttgtgaatggcagtgttatagatagctact
tgcattttacaggtagcttttgttttattgtttttctatgacacgttcaa
tgtgtaaattttctggtatttggccaattgctatgttgaagcagttcatt
aaatcagaaaatcccatgatttcttaataacattcataacatcaaagagc
aagcaggtaatttagatcagtagaatcagtgttactagaataactcaata
tgccatatcaatggctaggctaattagataaactttttattttcttacta
gtgtctattggctcatctcatatatttgtaaagaacaacaatatggagag
gtaaaagagatctctacattaaaaggaaatatatatgcaaatgtaaaata
atatattccacccctccataaacatttcttttactaggaggatttacaag
tcccagtttcaattagaccatctcattgtcc
gaattcctctgctggattagaaatgtttcatgttaaatagcaaagcctct
ttttgtttgcatctttaaaaacaaaacatcacatgtttaaaaaaaggaac
agcacaagtacaaacttcagaagtatctgggtaaataattgatgaataat
aaaacccttgtggtttaacccaatgaaattaactacaaagaaaaagcctc
agttatctccaatgagaatatattgccattaccacttcaaacttgagttg
catcacatgagcctgagataattgcttattgcccaagagtttattggtgt
ctttttgcttgctgatagatgtgatttaaacagaagacgcaaatccattg
tttagcttcaattttttatctaaatcaacttcccatgcctcttacaactg
cagaaaatatgcaagaattcatttagataagatagagaagtaattctgtc
actgaaatcattaaacagaagatattctaacgtattttgccaagaataca
caaattaaatacatactggaaagtacacttagcagaatatcttgaaaaga
atgcaactcacttctacagataatttataattgaaaaaggaaatgattat
attctatagtttattggcaaggttatatatactatatataaatatatata
gtatacaacatatgtatatatggtaatatatgcatatgcataaacatcta
catttatgttttcataaatcatggctcttcactattttgattaaaatcac
tatttactattttattttgttaaagattatgatatagaagactagtgcaa
ctagaatttcatctttgatacaaatatttgtttttcagatatttttaggt
aaacaattttaatctcatgtattttattttctattattatcacaggtttc
ttttgctgtgaccaaaaaaaaaaaaaaaaaaaaccttgtgaggaatggtt
ttactgggcttacagatggaatgatgtcccgacagagagtagaggatgat
cagagccacaaactcaacagacactatgatgatgtacttatattcctccc
catgctgctcagtaattctaaaaacttatgaacacagccagatgcagcac
cacattgctgacaattatctgtatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_110940462_110941621
seq2: B6Ng01-091G16.b_79_1226 (reverse)

seq1  GGACAATGAGATGCT-TAATGTAGAAATTTGTATTTTTATTATATTTACT  49
      ||||||||||||| | |||  | |||| | | | || ||    | |  | 
seq2  GGACAATGAGATGGTCTAA--TTGAAACTGGGACTTGTA----AAT--CC  42

seq1  ACATAGTAAAAAGAAAATGTAATGGA-GGGTAGAATATATATATATACAT  98
       | |||| ||||||||   | ||||| |||| ||||||||   | |||||
seq2  TCCTAGT-AAAAGAAATGTTTATGGAGGGGTGGAATATATTATTTTACAT  91

seq1  TTGCATATATATTT-CTTTTAATGTTAGAGATCTCTTTTAACTTCTCCAT  147
      |||||||||||||| ||||||||| |||||||||||||| || |||||||
seq2  TTGCATATATATTTCCTTTTAATG-TAGAGATCTCTTTT-ACCTCTCCAT  139

seq1  ATGTTTGTTCTTTACAAATATATGAGATGAGCCAAATAGACACTAGTTAA  197
      ||  ||||||||||||||||||||||||||||| |||||||||||| |||
seq2  ATTGTTGTTCTTTACAAATATATGAGATGAGCC-AATAGACACTAG-TAA  187

seq1  GAAAAT-AAAAGTTTATCTAATTAGCCTAGCCATTTGATATGGCATATTG  246
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAAATAAAAAGTTTATCTAATTAGCCTAGCCA-TTGATATGGCATATTG  236

seq1  AGTTATTCTAGTAACACTGATTCTACTGATCTAAATTAACCTGCTTGCTC  296
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTTATTCTAGTAACACTGATTCTACTGATCTAAATT-ACCTGCTTGCTC  285

seq1  TTTTGATGTTATGAATGTTATTAAGAAATCATGGGATTTTCTGATTTAAT  346
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGATGTTATGAATGTTATTAAGAAATCATGGGATTTTCTGATTTAAT  334

seq1  GAACTGCTTCAACATAGCAATTGGCCAAATACCAGAAAATTTACACATTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTTCAACATAGCAATTGGCCAAATACCAGAAAATTTACACATTG  384

seq1  AACGTGTCATAGAAAAACAATAAAACAAAAGCTACCTGTAAAATGCAAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGTCATAGAAAAACAATAAAACAAAAGCTACCTGTAAAATGCAAGT  434

seq1  AGCTATCTATAACACTGCCATTCACAAGATCATTATCAAACACAGTGAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCTATAACACTGCCATTCACAAGATCATTATCAAACACAGTGAAT  484

seq1  AATTCAAACTTACATATTTTTCACAGATGTAGTAGAATTAGAATAAAGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAACTTACATATTTTTCACAGATGTAGTAGAATTAGAATAAAGAA  534

seq1  CTCCCTGTTCTCTCATTCTCTTTGCCAAAGACAGTTTAAGACTGTAGTAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTTCTCTCATTCTCTTTGCCAAAGACAGTTTAAGACTGTAGTAG  584

seq1  CTCAGAGGTTCTGTATGTTTTCCAAACAAATGCAGGACCACCTGCATCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGTTCTGTATGTTTTCCAAACAAATGCAGGACCACCTGCATCTT  634

seq1  TACTTCTAAGAAATGGAGAATCCTATCAGTGGTGAGATAGAGGCTAATGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTAAGAAATGGAGAATCCTATCAGTGGTGAGATAGAGGCTAATGT  684

seq1  GGTCACCACATGCAGCCAGGAAGGAATTCCAGCTGTGGAGCAGGATACCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCACATGCAGCCAGGAAGGAATTCCAGCTGTGGAGCAGGATACCA  734

seq1  ATCCACCCACGAAAACTTCAACCCACAATTTATCCTGCCTACAAGATGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCACGAAAACTTCAACCCACAATTTATCCTGCCTACAAGATGTG  784

seq1  CAGGGATAAAAATGAAGCAACGTTTGAGGGGATGGCCGACGAAAACTGGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATAAAAATGAAGCAACGTTTGAGGGGATGGCCGACGAAAACTGGC  834

seq1  CCAAATTGAGACATGCCCCATGGGACACAGCCAACTCAGGACACTATTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGAGACATGCCCCATGGGACACAGCCAACTCAGGACACTATTCA  884

seq1  TGATACTCTTGTATGTATAGCATAATTGTCACTCAGAGGACACTGAGCAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTCTTGTATGTATAGCATAATTGTCACTCAGAGGACACTGAGCAG  934

seq1  CTTCATCCAGCAGTTGATGGAAACAGAGGCAGAAATCCACAGATAAACAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCAGCAGTTGATGGAAACAGAGGCAGAAATCCACAGATAAACAT  984

seq1  TAGGTTGAGCTTGGGACTCCTGTGGAAGAAGGGGAGGAAAAATTGTGGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGAGCTTGGGACTCCTGTGGAAGAAGGGGAGGAAAAATTGTGGGA  1034

seq1  ATCTGAAGGGTCAGGAAAATCTATAACCTGGGCTCATGAGGGCTCATAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGGGTCAGGAAAATCTATAACCTGGGCTCATGAGGGCTCATAGA  1084

seq1  GACTGAACTAATACATTTTCTCCATTGAAGAAATAGACATTCAAGTTAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAACTAATACATTTTCTCCATTGAAGAAATAGACATTCAAGTTAAG  1134

seq1  TTGAAAAGTATAAT  1160
      ||||||||||||||
seq2  TTGAAAAGTATAAT  1148

seq1: chr3_110782193_110783346
seq2: B6Ng01-091G16.g_66_1191

seq1  GAATTCCTCTGCTGGATTAGAAATGTTTCATGTTAAATAGCAAAGCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGCTGGATTAGAAATGTTTCATGTTAAATAGCAAAGCCTCT  50

seq1  TTTTGTTTGCATCTTTAAAAACAAAACATCACATGTTTAAAAAAAGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGCATCTTTAAAAACAAAACATCACATGTTTAAAAAAAGGAAC  100

seq1  AGCACAAGTACAAACTTCAGAAGTATCTGGGTAAATAATTGATGAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAGTACAAACTTCAGAAGTATCTGGGTAAATAATTGATGAATAAT  150

seq1  AAAACCCTTGTGGTTTAACCCAATGAAATTAACTACAAAGAAAAAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTTGTGGTTTAACCCAATGAAATTAACTACAAAGAAAAAGCCTC  200

seq1  AGTTATCTCCAATGAGAATATATTGCCATTACCACTTCAAACTTGAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCTCCAATGAGAATATATTGCCATTACCACTTCAAACTTGAGTTG  250

seq1  CATCACATGAGCCTGAGATAATTGCTTATTGCCCAAGAGTTTATTGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATGAGCCTGAGATAATTGCTTATTGCCCAAGAGTTTATTGGTGT  300

seq1  CTTTTTGCTTGCTGATAGATGTGATTTAAACAGAAGACGCAAATCCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGCTTGCTGATAGATGTGATTTAAACAGAAGACGCAAATCCATTG  350

seq1  TTTAGCTTCAATTTTTTATCTAAATCAACTTCCCATGCCTCTTACAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTCAATTTTTTATCTAAATCAACTTCCCATGCCTCTTACAACTG  400

seq1  CAGAAAATATGCAAGAATTCATTTAGATAAGATAGAGAAGTAATTCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATATGCAAGAATTCATTTAGATAAGATAGAGAAGTAATTCTGTC  450

seq1  ACTGAAATCATTAAACAGAAGATATTCTAACGTATTTTGCCAAGAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATCATTAAACAGAAGATATTCTAACGTATTTTGCCAAGAATACA  500

seq1  CAAATTAAATACATACTGGAAAGTACACTTAGCAGAATATCTTGAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAAATACATACTGGAAAGTACACTTAGCAGAATATCTTGAAAAGA  550

seq1  ATGCAACTCACTTCTACAGATAATTTATAATTGAAAAAGGAAATGATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACTCACTTCTACAGATAATTTATAATTGAAAAAGGAAATGATTAT  600

seq1  ATTCTATAGTTTATTGGCAAGGTTATATATACTATATATAAATATATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATAGTTTATTGGCAAGGTTATATATACTATATATAAATATATATA  650

seq1  GTATACAACATATGTATATATGGTAATATATGCATATGCATAAACATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAACATATGTATATATGGTAATATATGCATATGCATAAACATCTA  700

seq1  CATTTATGTTTTCATAAATCATGGCTCTTCACTATTTTGATTAAAATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGTTTTCATAAATCATGGCTCTTCACTATTTTGATTAAAATCAC  750

seq1  TATTTACTATTTTATTTTGTTAAAGATTATGATATAGAAGACTAGTGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTATTTTATTTTGTTAAAGATTATGATATAGAAGACTAGTGCAA  800

seq1  CTAGAATTTCATCTTTGATACAAATATTTGTTTTTCAGATATTTTTAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTTCATCTTTGATACAAATATTTGTTTTTCAGATATTTTTAGGT  850

seq1  AAACAATTTTAATCTCATGTATTTTATTTTCTATTATTATCACAGGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTTTAATCTCATGTATTTTATTTTCTATTATTATCACAGGTTTC  900

seq1  TTTTGCTGTGACCAAAAAAAAAAAAAAAAAAAAACCTTGTGAGGAATGGT  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGTGACC-AAAAAAAAAAAAAAAAAAAACCTTGTGAGGAATGGT  949

seq1  TTTACTGGGCTTACAGATGGAATGATGTCCCGACAGAGAGTAGAGGAAGG  1000
      |||||||||||||||||||||||||||||||||||||||||||||| | |
seq2  TTTACTGGGCTTACAGATGGAATGATGTCCCGACAGAGAGTAGAGG-ATG  998

seq1  ATCAAGGAGCCACAAACTTAAACAGACACTATGATGGAATGTTACTTAAT  1050
      ||||  ||||||||||| | ||||||||||||||||  ||| ||||| ||
seq2  ATCA--GAGCCACAAAC-TCAACAGACACTATGATG--ATG-TACTT-AT  1041

seq1  ATTCCTCCCCCATGGCTTGCTCAGTTTAATTTCTTATAAAACTTATGGAA  1100
      |||||| |||||||   ||||||||   | ||||   ||||||||| |||
seq2  ATTCCT-CCCCATG--CTGCTCAGT---AATTCT--AAAAACTTAT-GAA  1082

seq1  CACCAGCCCAGAATGGCAGCACCCACCACTTGCTGGACAATTAATCCTGT  1150
      || ||| |||||   |||||| ||||   ||||| ||||||||   ||||
seq2  CA-CAG-CCAGA--TGCAGCA-CCAC--ATTGCT-GACAATTA--TCTGT  1122

seq1  ATCA  1154
      ||||
seq2  ATCA  1126