BAC Information

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BAC

Clone NameB6Ng01-091J16
Chromosome3 (Build37)
Map Location 16,276,056 - 16,276,979
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091J16.bB6Ng01-091J16.g
ACCDH903582DH903583
length1,279978
definitionDH903582|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J16, 5' end.DH903583|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatatctaaacatgataaaaacaatctacagcaaacca
gtagccaacctcaaaataaatggcaagaagctggaagcattcccactaaa
atcagggactagataaggctacccactttctcactacctattcaacattg
tacttgaagtcctggccacagcaatttgacagcaaaaagagatcaaggga
atacaaattggaaaggaagaagtcaaaatatcactttttgcaaatgatat
gatagtatatataagtgaccctaaaaattacagcagagaacccctaaact
tgataaacagcttcagtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaaggataaacaggctgagaaagaaattag
gaaaacaacacccttctcaatagtcacaaataatataaaatagccattaa
gagcactgacctgaggaataccgaatggcagagaagcacctgaaaaactg
ttcagcatccttaatcatcagggaaatgcaaataaaaacaaccctgagat
tccacctcacaacagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctggcaaggatctggagaaagaggaacactcttccgtagttgatg
ggattgcaagcttatacacccactctggaaatcagtctggcaattcctca
gaaaattggacattgtagtactggaggatcctgcaatacctctcctgcac
atatatccagaagatgccccaactggtaagaaggacacatgctacactat
gttcatagcagccttatttataatagccagaagctggagagaacccagat
gcccctcaacagaggaatggacacagaaaatgtggtatatttacacaatg
gaacactactcagctgttaaaaagaatgaatttatgaaattcctaggtaa
atggatggaccaggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgcactcactaataagtggatattagcccagaaac
taagaatacccaagatataagaatcatttgtgaactcatgaaactcagag
accaagacaactatggacatttgcccttcttgaatgggaacaaacaccca
tggaaggagtacagaacccaggtagctggaacaagacagacatctaagac
tgcaatcgatcatcctatcgctcaagctgaacattctacccatacagaat
tgttcgtaaagaaacctggatatatacgc
gaattctttgtttagctctataccccatttttaatttttttttctggagt
aaattttcttgagttctttatatatattggatattattcccctatctgat
ttaggattagtaaggatcctctcccaatcagttggtggcattggtcttat
tgacagtgtcttttgccttacagaagcttggcaatgttattaggtcccat
ttatcaatattcaatcttacagcacaagccattgctgttctgttcaggaa
tttttcttttgtgctcatatcttcaaggcttttcaccactttcccctcta
taagtttcagtttctctagttttatgtggagttccttgagcctcttagac
ttgagctttgtaaaaggagatatccccttgatgtccatttgttgtcgaat
tgttttgtctagaacttcaagtactattttgaataggtagggagaaagtg
ggcagccttctctagtccctgattttagtgggattgtttcgggtttctct
ccatttagtttgatgttggctactggtttgctgtatattgcttttattat
gtttaggaattcagtttctttagagaacctatccagttggccatgattgt
ttgatgcccactggctgaataagatcaacaatggatgaggccattttgct
ttcttagcagaggctggcaccagggacttgttctgtgtgccagagattgt
tagtatttctccactgacttcttcactaacagaagtttcctctgggctat
tttacatatatatatatatatatatatatatatatatatatatatatata
tatatatacatagtgctttacctcaaaacaggcactgtaagtgcagacaa
ggggatgtgatatgtacataattggattgcagttgcctatccccccccct
atctaatacatccattctgtggctgataaagagttagtaaagtcatctta
gattaaccccagctgtcacaccattgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16276056_16276979
seq2: B6Ng01-091J16.g_129_1041

seq1  TCTTTATATATATTGGATATTATTCCCCTATCTGATTTAGGATTAGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATATATTGGATATTATTCCCCTATCTGATTTAGGATTAGTAAG  50

seq1  GATCCTCTCCCAATCAGTTGGTGGCATTGGTCTTATTGACAGTGTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTCCCAATCAGTTGGTGGCATTGGTCTTATTGACAGTGTCTTTT  100

seq1  GCCTTACAGAAGCTTGGCAATGTTATTAGGTCCCATTTATCAATATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACAGAAGCTTGGCAATGTTATTAGGTCCCATTTATCAATATTCAA  150

seq1  TCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCTTTTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCTTTTGTGC  200

seq1  TCATATCTTCAAGGCTTTTCACCACTTTCCCCTCTATAAGTTTCAGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCTTCAAGGCTTTTCACCACTTTCCCCTCTATAAGTTTCAGTTTC  250

seq1  TCTAGTTTTATGTGGAGTTCCTTGAGCCTCTTAGACTTGAGCTTTGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTTATGTGGAGTTCCTTGAGCCTCTTAGACTTGAGCTTTGTAAA  300

seq1  AGGAGATATCCCCTTGATGTCCATTTGTTGTCGAATTGTTTTGTCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATATCCCCTTGATGTCCATTTGTTGTCGAATTGTTTTGTCTAGAA  350

seq1  CTTCAAGTACTATTTTGAATAGGTAGGGAGAAAGTGGGCAGCCTTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTACTATTTTGAATAGGTAGGGAGAAAGTGGGCAGCCTTCTCTA  400

seq1  GTCCCTGATTTTAGTGGGATTGTTTCGGGTTTCTCTCCATTTAGTTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGATTTTAGTGGGATTGTTTCGGGTTTCTCTCCATTTAGTTTGAT  450

seq1  GTTGGCTACTGGTTTGCTGTATATTGCTTTTATTATGTTTAGGAATTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTACTGGTTTGCTGTATATTGCTTTTATTATGTTTAGGAATTCAG  500

seq1  TTTCTTTAGAGAACCTATCCAGTTGGCCATGATTGTTTGATGCCCACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAGAGAACCTATCCAGTTGGCCATGATTGTTTGATGCCCACTGG  550

seq1  CTGAATAAGATCAACAATGGATGAGGCCATTTTGCTTTCTTAGCAGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAGATCAACAATGGATGAGGCCATTTTGCTTTCTTAGCAGAGGC  600

seq1  TGGCACCAGGGACTTGTTCTGTGTGCCAGAGATTGTTAGTATTTCTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCAGGGACTTGTTCTGTGTGCCAGAGATTGTTAGTATTTCTCCAC  650

seq1  TGACTTCTTCACTAACAGAAGTTTCCTCTGGGCTATTTTACATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTTCACTAACAGAAGTTTCCTCTGGGCTATTTTACATATATATA  700

seq1  TATATATATATATATATATATATATATATATATATTTTTTTTTTCAGTGT  750
      ||||||||||||||||||||||||||||||||||| | | | | ||  ||
seq2  TATATATATATATATATATATATATATATATATATATATATATACATAGT  750

seq1  GCTTTACCTCAAAGCAGGCACTGTAATTCCAGACAATGGGATGTGATATG  800
      ||||||||||||| |||||||||||| | ||||||| |||||||||||||
seq2  GCTTTACCTCAAAACAGGCACTGTAAGTGCAGACAAGGGGATGTGATATG  800

seq1  TTACAATAGTTTGTATTGTAAGTTACCTATCCCTCCCCCTATCTTATTTC  850
       ||||  |  ||| ||||  |||| |||||||| ||||||||| || | |
seq2  -TACATAA--TTGGATTG-CAGTTGCCTATCCCCCCCCCTATC-TAATAC  845

seq1  TTCCTTTCTGTGGCTGAATAGAGAAGTTAGTCAAGATCATCTTTGTTTTA  900
       ||| ||||||||||| ||| || ||||||| ||| ||||||| |  |||
seq2  ATCCATTCTGTGGCTG-ATAAAG-AGTTAGTAAAG-TCATCTTAG-ATTA  891

seq1  ACCCCATCTGTTCAACACCATTGA  924
      |||||| ||||   ||||||||||
seq2  ACCCCAGCTGT--CACACCATTGA  913