BAC Information

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BAC

Clone NameB6Ng01-092B08
Chromosome3 (Build37)
Map Location 120,347,723 - 120,506,965
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B08.bB6Ng01-092B08.g
ACCDH903941DH903942
length1,0831,125
definitionDH903941|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B08, 5' end.DH903942|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,347,723 - 120,348,804)(120,505,826 - 120,506,965)
sequence
gaattcactgggaggaggctgttctgtcttcatgtgttcttaagaccacc
ttcaagactcaacgatggcattagtgtttcctaggttgacacaaagaaga
taaaatccaaaacttccctcttctcttccaggacacgtttggtcaacatt
tctgacataaacaggctggctacaaaaagtgccctccttgtgcttgcttg
gcagtttccatctcttacatgttcggctgtttgtcacatttattttctcc
cttacctcaatgtatataactgtaatcatcaaaacttttaattaaaatca
cttgcctgaaattacctgttccaatagacatgtgtaacagactacatttt
aattacttttccccaccagagccagagattgcttttgatttataaatata
aacctggatctctgaggataataaagaaaattacatgtaaacaagtaata
tgcacaatcttttatcttcataaatctaataacttaaccttcctagctta
tttctactgcttgcgcttctttgaaactaaaggagtatgacagtcatgct
tcggcaagcctggtattgctatcagtgtgcttatttgatgtgctatattg
aagtattttcttaaggctattcatagttttatatttaactctcctttcct
tttctagtgtggttattaaaattggtttctccatcaaatctcaggcctct
tggaggtgatcagtggatctgcatcagccttgactctcttcttcaaaact
gagttattccaacaactgatttcagttcactgattgaggggcgaggatgc
cacacatcctttcaggttctccataattgcacattgctgttatccttggt
tctcttctggggctttgctacttgtgaacaacgagtctcactttaacatg
tattatatttccttttactttgagattatatttaactacatttgtgagac
ctttcgctctctttcttctaaatctccatatagcccttcttgctctcttt
tacatttagacctttttgtagttattattacatgaaacacacacaccacc
cacatgcaccccacataccacacatacacacac
gaattcagaagctaggttgtccagtgagtgttgagactacagcaggaagg
gaatatttgaggggatctagtttctttggagtttctaattccttggtaaa
ctccaaaagagtctagggaatgtgcgttaactgtgattctaagaggagag
gaaagggggtgaatttatctgaaaaccttctggcaaatgattggattaat
gagaaccagtagtgatgtcaactgactcatagggatatatgtgttctcag
agtcagagatgagacagctggcgtattgttggtgtgcagctggatagcta
ctccagaagggtgcctgattgcatgattacactttcctagtggcttattt
cctgaaggtgcactgtacccatccataatgggcatggagtcattcagtgt
ctatagtcaaggtgtgaaactcaacaacatgagatagcaagtatcgtgtt
caatgtcatgaggctctcttcttcctggtaatataggatctgaagagctc
attgagtattgagcacattcatttgtaaaagatgcagaccaggtggactc
agcagaaagggatgcagtgatgttaacatgcatactccatttgtaggcaa
aaagaagaatggcatgaggacaaggccagtatttagcacttgggtggaaa
tggatactagttagcaaagagagaatgagccaggctatacagttacgtta
ttgaaggctcaaactcaagtgagaactttgagtgattttttaacactgga
acttgaaattaaaatctctgaggaaagaaaacaggtcttctagatttttg
atagcataagattcagatcagttactgtgaacgttttagcaaaatggtgg
aaaccaaaaagatggtctaggcagagtcataacactgacattttcctaaa
agttcactagctctgtaaaggaatggatcgggatacagtacctggccagt
actgtacaatgaacaaacattgttgttggtgtttttcatatcttaaatgc
ttatttcattcaaatgcttatcatacgtttaccctgtgaaaataacaacc
aaagtagcagattgttccatgcttctcgagctatcatttgcagaatattg
actcagaccgactctagaagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120347723_120348804
seq2: B6Ng01-092B08.b_46_1128

seq1  GAATTCACTGGGAGGAGGCTGTTCTGTCTTCATGTGTTCTTAAGACCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGGAGGAGGCTGTTCTGTCTTCATGTGTTCTTAAGACCACC  50

seq1  TTCAAGACTCAACGATGGCATTAGTGTTTCCTAGGTTGACACAAAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGACTCAACGATGGCATTAGTGTTTCCTAGGTTGACACAAAGAAGA  100

seq1  TAAAATCCAAAACTTCCCTCTTCTCTTCCAGGACACGTTTGGTCAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCAAAACTTCCCTCTTCTCTTCCAGGACACGTTTGGTCAACATT  150

seq1  TCTGACATAAACAGGCTGGCTACAAAAAGTGCCCTCCTTGTGCTTGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACATAAACAGGCTGGCTACAAAAAGTGCCCTCCTTGTGCTTGCTTG  200

seq1  GCAGTTTCCATCTCTTACATGTTCGGCTGTTTGTCACATTTATTTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCCATCTCTTACATGTTCGGCTGTTTGTCACATTTATTTTCTCC  250

seq1  CTTACCTCAATGTATATAACTGTAATCATCAAAACTTTTAATTAAAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCAATGTATATAACTGTAATCATCAAAACTTTTAATTAAAATCA  300

seq1  CTTGCCTGAAATTACCTGTTCCAATAGACATGTGTAACAGACTACATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGAAATTACCTGTTCCAATAGACATGTGTAACAGACTACATTTT  350

seq1  AATTACTTTTCCCCACCAGAGCCAGAGATTGCTTTTGATTTATAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTTTCCCCACCAGAGCCAGAGATTGCTTTTGATTTATAAATATA  400

seq1  AACCTGGATCTCTGAGGATAATAAAGAAAATTACATGTAAACAAGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGATCTCTGAGGATAATAAAGAAAATTACATGTAAACAAGTAATA  450

seq1  TGCACAATCTTTTATCTTCATAAATCTAATAACTTAACCTTCCTAGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATCTTTTATCTTCATAAATCTAATAACTTAACCTTCCTAGCTTA  500

seq1  TTTCTACTGCTTGCGCTTCTTTGAAACTAAAGGAGTATGACAGTCATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTGCTTGCGCTTCTTTGAAACTAAAGGAGTATGACAGTCATGCT  550

seq1  TCGGCAAGCCTGGTATTGCTATCAGTGTGCTTATTTGATGTGCTATATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCAAGCCTGGTATTGCTATCAGTGTGCTTATTTGATGTGCTATATTG  600

seq1  AAGTATTTTCTTAAGGCTATTCATAGTTTTATATTTAACTCTCCTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTTCTTAAGGCTATTCATAGTTTTATATTTAACTCTCCTTTCCT  650

seq1  TTTCTAGTGTGGTTATTAAAATTGGTTTCTCCATCAAATCTCAGGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTGTGGTTATTAAAATTGGTTTCTCCATCAAATCTCAGGCCTCT  700

seq1  TGGAGGTGATCAGTGGATCTGCATCAGCCTTGACTCTCTTCTTCAAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGATCAGTGGATCTGCATCAGCCTTGACTCTCTTCTTCAAAACT  750

seq1  GAGTTATTCCAACAACTGATTTCAGTTCACTGATTGAGGGGCGAGGATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTCCAACAACTGATTTCAGTTCACTGATTGAGGGGCGAGGATGC  800

seq1  CACACATCCTTTCAGGTTCTCCATAATTGCACATTGCTGTTATCCTTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCCTTTCAGGTTCTCCATAATTGCACATTGCTGTTATCCTTGGT  850

seq1  TCTCTTCTGGGGCTTTGCTACTTGTGAACAACGAGTCTCACTTTAACATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGGGGCTTTGCTACTTGTGAACAACGAGTCTCACTTTAACATG  900

seq1  TATTATATTTCCTTTTACTTTGAGATTATAATTTAACTACATTTGTGAGA  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TATTATATTTCCTTTTACTTTGAGATTAT-ATTTAACTACATTTGTGAGA  949

seq1  CCTTTCGCTCTCTTTCTTCTAAATTCTCCCATAATAGCCCTTCTTGCTCT  1000
      ||||||||||||||||||||||| ||| |||| |||||||||||||||||
seq2  CCTTTCGCTCTCTTTCTTCTAAA-TCT-CCAT-ATAGCCCTTCTTGCTCT  996

seq1  CTTTTACATTTAAGACCTTTTTTGTTAGTTATTATTACATGAACACACAC  1050
      ||||||||||| ||||||||||   |||||||||||||||||| ||||||
seq2  CTTTTACATTT-AGACCTTTTT--GTAGTTATTATTACATGAA-ACACAC  1042

seq1  ACA-CACACACATGCAC--------ACACACATACACACAC  1082
      ||| ||| |||||||||         |||||||||||||||
seq2  ACACCACCCACATGCACCCCACATACCACACATACACACAC  1083

seq1: chr3_120505826_120506965
seq2: B6Ng01-092B08.g_69_1193 (reverse)

seq1  TCTCTCCTTCTAGAGTCTGGTCCTAGTCAATATATTCTTGCAAATGATAA  50
      ||||| ||||||||||| ||||  |||||  |||||| |||||||||| |
seq2  TCTCT-CTTCTAGAGTC-GGTCTGAGTCA--ATATTC-TGCAAATGAT-A  44

seq1  GCTCGGAGAAGCATGGACCACATCTGCTAACTTTGTTGTTATATTTTCCA  100
      |||| |||||||||||| || ||||||||  || |||||||   ||| ||
seq2  GCTC-GAGAAGCATGGAACA-ATCTGCTACTTTGGTTGTTA---TTTTCA  89

seq1  CAGGGTAAACGTATGATAAGCATTTGAATGAAATAAGCATTTAAAGATAT  150
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  CAGGGTAAACGTATGATAAGCATTTGAATGAAATAAGCATTT-AAGATA-  137

seq1  TGAAAAACACAAACAACAATGTTTGTTCATTGTACAGTACTGGCCAGGTA  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACACCAACAACAATGTTTGTTCATTGTACAGTACTGGCCAGGTA  187

seq1  CTGTATCCCCGATCCATTCCTTTACAGAGCTAGTGAACCTTTTAGGAAAA  250
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTAT-CCCGATCCATTCCTTTACAGAGCTAGTGAA-CTTTTAGGAAAA  235

seq1  TGTCAGTGTTATGACTCTGCCTAGACCATCTTTTTGGTTTCCACCATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTGTTATGACTCTGCCTAGACCATCTTTTTGGTTTCCACCATTTT  285

seq1  GCTAAAACGTTCACAGTAACTGATCTGAATCTTATGCTATCAAAAATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACGTTCACAGTAACTGATCTGAATCTTATGCTATCAAAAATCTA  335

seq1  GAAGACCTGTTTTCTTTCCTCAGAGATTTTAATTTCAAGTTCCAGTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCTGTTTTCTTTCCTCAGAGATTTTAATTTCAAGTTCCAGTGTTA  385

seq1  AAAAATCACTCAAAGTTCTCACTTGAGTTTGAGCCTTCAATAACGTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCACTCAAAGTTCTCACTTGAGTTTGAGCCTTCAATAACGTAACT  435

seq1  GTATAGCCTGGCTCATTCTCTCTTTGCTAACTAGTATCCATTTCCACCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCCTGGCTCATTCTCTCTTTGCTAACTAGTATCCATTTCCACCCA  485

seq1  AGTGCTAAATACTGGCCTTGTCCTCATGCCATTCTTCTTTTTGCCTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAATACTGGCCTTGTCCTCATGCCATTCTTCTTTTTGCCTACAA  535

seq1  ATGGAGTATGCATGTTAACATCACTGCATCCCTTTCTGCTGAGTCCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTATGCATGTTAACATCACTGCATCCCTTTCTGCTGAGTCCACCT  585

seq1  GGTCTGCATCTTTTACAAATGAATGTGCTCAATACTCAATGAGCTCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCATCTTTTACAAATGAATGTGCTCAATACTCAATGAGCTCTTCA  635

seq1  GATCCTATATTACCAGGAAGAAGAGAGCCTCATGACATTGAACACGATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTATATTACCAGGAAGAAGAGAGCCTCATGACATTGAACACGATAC  685

seq1  TTGCTATCTCATGTTGTTGAGTTTCACACCTTGACTATAGACACTGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATCTCATGTTGTTGAGTTTCACACCTTGACTATAGACACTGAATG  735

seq1  ACTCCATGCCCATTATGGATGGGTACAGTGCACCTTCAGGAAATAAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGCCCATTATGGATGGGTACAGTGCACCTTCAGGAAATAAGCCA  785

seq1  CTAGGAAAGTGTAATCATGCAATCAGGCACCCTTCTGGAGTAGCTATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAAGTGTAATCATGCAATCAGGCACCCTTCTGGAGTAGCTATCCA  835

seq1  GCTGCACACCAACAATACGCCAGCTGTCTCATCTCTGACTCTGAGAACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACACCAACAATACGCCAGCTGTCTCATCTCTGACTCTGAGAACAC  885

seq1  ATATATCCCTATGAGTCAGTTGACATCACTACTGGTTCTCATTAATCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCCTATGAGTCAGTTGACATCACTACTGGTTCTCATTAATCCAA  935

seq1  TCATTTGCCAGAAGGTTTTCAGATAAATTCACCCCCTTTCCTCTCCTCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCCAGAAGGTTTTCAGATAAATTCACCCCCTTTCCTCTCCTCTT  985

seq1  AGAATCACAGTTAACGCACATTCCCTAGACTCTTTTGGAGTTTACCAAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCACAGTTAACGCACATTCCCTAGACTCTTTTGGAGTTTACCAAGG  1035

seq1  AATTAGAAACTCCAAAGAAACTAGATCCCCTCAAATATTCCCTTCCTGCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAACTCCAAAGAAACTAGATCCCCTCAAATATTCCCTTCCTGCT  1085

seq1  GTAGTCTCAACACTCACTGGACAACCTAGCTTCTGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTCAACACTCACTGGACAACCTAGCTTCTGAATTC  1125